RNA–Protein interactions for RNA: ENST00000576221.1

PCTP-208, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 5

Gene PCTP, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-208ENST00000576221 SLIT3O75094 1523 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 ATRNO75882 1429 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 A0A0G2JS52 829 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 HOXC9P31274 260 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 MYT1Q01538 1121 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 TOM1L2Q6ZVM7 507 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 USP35Q9P2H5 1018 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 POLKQ9UBT6 870 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
PCTP-208ENST00000576221 ANKRD24Q8TF21 1146 aa10.68□□□□□ -0.7
PCTP-208ENST00000576221 NLRP2Q9NX02 1062 aa10.68□□□□□ -0.7
PCTP-208ENST00000576221 SLIT2O94813 1529 aa10.68□□□□□ -0.7
PCTP-208ENST00000576221 ABCA3Q99758 1704 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 ANP32CO43423 234 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 MTHFSP49914 203 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 RALBP1Q15311 655 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 VPS72Q15906 364 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 HSP90AB2PQ58FF8 381 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 GJD4Q96KN9 370 aaPredicted RBP10.67□□□□□ -0.7
PCTP-208ENST00000576221 CFAP53Q96M91 514 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 RGS12O14924 1447 aa10.67□□□□□ -0.7
PCTP-208ENST00000576221 FLT4P35916 1363 aa10.66□□□□□ -0.7
PCTP-208ENST00000576221 LARP1Q6PKG0 1096 aaKnown RBP10.66□□□□□ -0.7
PCTP-208ENST00000576221 SMG6Q86US8 1419 aaKnown RBP10.66□□□□□ -0.7
PCTP-208ENST00000576221 RTL1A6NKG5 1358 aa10.65□□□□□ -0.7
PCTP-208ENST00000576221 KIF24Q5T7B8 1368 aa10.65□□□□□ -0.7
PCTP-208ENST00000576221 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.7
PCTP-208ENST00000576221 PPP2R1AP30153 589 aa10.65□□□□□ -0.7
PCTP-208ENST00000576221 CDK12Q9NYV4 1490 aaPredicted RBP10.65□□□□□ -0.7
PCTP-208ENST00000576221 BLMP54132 1417 aaPredicted RBP10.65□□□□□ -0.7
PCTP-208ENST00000576221 PHRF1Q9P1Y6 1649 aaKnown RBP10.65□□□□□ -0.7
PCTP-208ENST00000576221 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
PCTP-208ENST00000576221 NFAT5O94916 1531 aa10.64□□□□□ -0.71
PCTP-208ENST00000576221 ERBB3P21860 1342 aa10.64□□□□□ -0.71
PCTP-208ENST00000576221 TCP11L2Q8N4U5 519 aa10.64□□□□□ -0.71
PCTP-208ENST00000576221 INSRP06213 1382 aa10.64□□□□□ -0.71
PCTP-208ENST00000576221 SPATA31A5Q5VU36 1347 aa10.63□□□□□ -0.71
PCTP-208ENST00000576221 SPATA31A7Q8IWB4 1347 aa10.63□□□□□ -0.71
PCTP-208ENST00000576221 COL14A1Q05707 1796 aaKnown RBP10.63□□□□□ -0.71
PCTP-208ENST00000576221 FAM98CQ17RN3 349 aaKnown RBP10.63□□□□□ -0.71
PCTP-208ENST00000576221 CARD10Q9BWT7 1032 aa10.63□□□□□ -0.71
PCTP-208ENST00000576221 NUDCQ9Y266 331 aa10.63□□□□□ -0.71
PCTP-208ENST00000576221 THRAP3Q9Y2W1 955 aaKnown RBP10.63□□□□□ -0.71
PCTP-208ENST00000576221 PLCH1Q4KWH8 1693 aa10.63□□□□□ -0.71
PCTP-208ENST00000576221 CAMTA1Q9Y6Y1 1673 aa10.63□□□□□ -0.71
PCTP-208ENST00000576221 KIF20BQ96Q89 1820 aa10.63□□□□□ -0.71
PCTP-208ENST00000576221 COL5A2P05997 1499 aaPredicted RBP10.62□□□□□ -0.71
PCTP-208ENST00000576221 SPATA31A1Q5TZJ5 1347 aa10.62□□□□□ -0.71
PCTP-208ENST00000576221 GLI3P10071 1580 aa10.62□□□□□ -0.71
PCTP-208ENST00000576221 CRB1P82279 1406 aa10.62□□□□□ -0.71
PCTP-208ENST00000576221 DIAPH1O60610 1272 aaKnown RBP10.62□□□□□ -0.71
PCTP-208ENST00000576221 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
PCTP-208ENST00000576221 PRKRIP1Q9H875 184 aaPredicted RBP10.62□□□□□ -0.71
PCTP-208ENST00000576221 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.61□□□□□ -0.71
PCTP-208ENST00000576221 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
PCTP-208ENST00000576221 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
PCTP-208ENST00000576221 PARD3Q8TEW0 1356 aa10.61□□□□□ -0.71
PCTP-208ENST00000576221 NBPF6Q5VWK0 638 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 BARGINQ6ZT62 677 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 SEPT12Q8IYM1 358 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 USHBP1Q8N6Y0 703 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 RAPGEF4Q8WZA2 1011 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 NBPF4Q96M43 638 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
PCTP-208ENST00000576221 NWD2Q9ULI1 1742 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
PCTP-208ENST00000576221 ABCC6O95255 1503 aa10.59□□□□□ -0.71
PCTP-208ENST00000576221 NRAPQ86VF7 1730 aa10.59□□□□□ -0.71
PCTP-208ENST00000576221 ONECUT3O60422 494 aaPredicted RBP10.59□□□□□ -0.71
PCTP-208ENST00000576221 IL2RBP14784 551 aa10.59□□□□□ -0.71
PCTP-208ENST00000576221 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
PCTP-208ENST00000576221 DIEXFQ68CQ4 756 aaKnown RBP10.59□□□□□ -0.71
PCTP-208ENST00000576221 EYA1Q99502 592 aa10.59□□□□□ -0.71
PCTP-208ENST00000576221 EXOC5O00471 708 aa10.58□□□□□ -0.72
PCTP-208ENST00000576221 TATP17735 454 aaPredicted RBP10.58□□□□□ -0.72
PCTP-208ENST00000576221 IL13P35225 146 aa10.58□□□□□ -0.72
PCTP-208ENST00000576221 DDB1Q16531 1140 aa10.58□□□□□ -0.72
PCTP-208ENST00000576221 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
PCTP-208ENST00000576221 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCTP-208ENST00000576221 LMO7Q8WWI1 1683 aa10.57□□□□□ -0.72
PCTP-208ENST00000576221 BRWD3Q6RI45 1802 aa10.56□□□□□ -0.72
PCTP-208ENST00000576221 ANKRD26Q9UPS8 1709 aa10.56□□□□□ -0.72
PCTP-208ENST00000576221 NEFMP07197 916 aa10.56□□□□□ -0.72
PCTP-208ENST00000576221 HMOX1P09601 288 aa10.56□□□□□ -0.72
PCTP-208ENST00000576221 WDR43Q15061 677 aaKnown RBP eCLIP10.56□□□□□ -0.72
PCTP-208ENST00000576221 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
PCTP-208ENST00000576221 KRT27Q7Z3Y8 459 aa10.56□□□□□ -0.72
PCTP-208ENST00000576221 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
PCTP-208ENST00000576221 DDX54Q8TDD1 881 aaKnown RBP10.55□□□□□ -0.72
PCTP-208ENST00000576221 SPG7Q9UQ90 795 aa10.55□□□□□ -0.72
PCTP-208ENST00000576221 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
PCTP-208ENST00000576221 COL18A1P39060 1754 aa10.54□□□□□ -0.72
PCTP-208ENST00000576221 PLEKHO1Q53GL0 409 aaPredicted RBP10.54□□□□□ -0.72
PCTP-208ENST00000576221 SRCAPQ6ZRS2 3230 aa10.54□□□□□ -0.72
PCTP-208ENST00000576221 ZCRB1Q8TBF4 217 aaKnown RBP10.54□□□□□ -0.72
PCTP-208ENST00000576221 PNNQ9H307 717 aaKnown RBP10.54□□□□□ -0.72
PCTP-208ENST00000576221 MRS2Q9HD23 443 aa10.54□□□□□ -0.72
PCTP-208ENST00000576221 LTN1O94822 1766 aa10.54□□□□□ -0.72
PCTP-208ENST00000576221 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
PCTP-208ENST00000576221 PEAK1Q9H792 1746 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms