RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 STRN4Q9NRL3 753 aa24.44■■□□□ 1.5
CLDN7-208ENST00000575313 CCDC9Q9Y3X0 531 aaKnown RBP24.44■■□□□ 1.5
CLDN7-208ENST00000575313 COL18A1P39060 1754 aa24.44■■□□□ 1.5
CLDN7-208ENST00000575313 COL5A2P05997 1499 aaPredicted RBP24.43■■□□□ 1.5
CLDN7-208ENST00000575313 LTN1O94822 1766 aa24.42■■□□□ 1.5
CLDN7-208ENST00000575313 SPATA31A5Q5VU36 1347 aa24.4■■□□□ 1.5
CLDN7-208ENST00000575313 SPATA31A7Q8IWB4 1347 aa24.4■■□□□ 1.5
CLDN7-208ENST00000575313 PER1O15534 1290 aaPredicted RBP24.4■■□□□ 1.5
CLDN7-208ENST00000575313 AXIN2Q9Y2T1 843 aa24.4■■□□□ 1.5
CLDN7-208ENST00000575313 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
CLDN7-208ENST00000575313 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.5
CLDN7-208ENST00000575313 GLI3P10071 1580 aa24.39■■□□□ 1.5
CLDN7-208ENST00000575313 BLMP54132 1417 aaPredicted RBP24.38■■□□□ 1.49
CLDN7-208ENST00000575313 AMER1Q5JTC6 1135 aaPredicted RBP24.38■■□□□ 1.49
CLDN7-208ENST00000575313 AMPHP49418 695 aa24.37■■□□□ 1.49
CLDN7-208ENST00000575313 LARP1Q6PKG0 1096 aaKnown RBP24.37■■□□□ 1.49
CLDN7-208ENST00000575313 IP6K1Q92551 441 aa24.37■■□□□ 1.49
CLDN7-208ENST00000575313 RTL1A6NKG5 1358 aa24.37■■□□□ 1.49
CLDN7-208ENST00000575313 SPATA31A1Q5TZJ5 1347 aa24.36■■□□□ 1.49
CLDN7-208ENST00000575313 WDR17Q8IZU2 1322 aa24.36■■□□□ 1.49
CLDN7-208ENST00000575313 FBLN1P23142 703 aa24.36■■□□□ 1.49
CLDN7-208ENST00000575313 KIF24Q5T7B8 1368 aa24.36■■□□□ 1.49
CLDN7-208ENST00000575313 RGS12O14924 1447 aa24.35■■□□□ 1.49
CLDN7-208ENST00000575313 CRB1P82279 1406 aa24.35■■□□□ 1.49
CLDN7-208ENST00000575313 RRS1Q15050 365 aaKnown RBP24.35■■□□□ 1.49
CLDN7-208ENST00000575313 MORC1Q86VD1 984 aa24.35■■□□□ 1.49
CLDN7-208ENST00000575313 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
CLDN7-208ENST00000575313 SOCS7O14512 581 aa24.34■■□□□ 1.49
CLDN7-208ENST00000575313 CSB-PGBD3P0DP91 1061 aa24.34■■□□□ 1.49
CLDN7-208ENST00000575313 ONECUT3O60422 494 aaPredicted RBP24.33■■□□□ 1.49
CLDN7-208ENST00000575313 HOXC9P31274 260 aa24.33■■□□□ 1.49
CLDN7-208ENST00000575313 TOM1L2Q6ZVM7 507 aa24.33■■□□□ 1.49
CLDN7-208ENST00000575313 RGPD5Q99666 1765 aa24.33■■□□□ 1.49
CLDN7-208ENST00000575313 ERBB3P21860 1342 aa24.33■■□□□ 1.48
CLDN7-208ENST00000575313 THRAP3Q9Y2W1 955 aaKnown RBP24.32■■□□□ 1.48
CLDN7-208ENST00000575313 FLT4P35916 1363 aa24.31■■□□□ 1.48
CLDN7-208ENST00000575313 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
CLDN7-208ENST00000575313 ANKRD24Q8TF21 1146 aa24.31■■□□□ 1.48
CLDN7-208ENST00000575313 TNNT2P45379 298 aaPredicted RBP24.3■■□□□ 1.48
CLDN7-208ENST00000575313 FAM98CQ17RN3 349 aaKnown RBP24.3■■□□□ 1.48
CLDN7-208ENST00000575313 USP35Q9P2H5 1018 aa24.3■■□□□ 1.48
CLDN7-208ENST00000575313 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
CLDN7-208ENST00000575313 BARGINQ6ZT62 677 aa24.29■■□□□ 1.48
CLDN7-208ENST00000575313 SEPT12Q8IYM1 358 aa24.28■■□□□ 1.48
CLDN7-208ENST00000575313 CARD10Q9BWT7 1032 aa24.28■■□□□ 1.48
CLDN7-208ENST00000575313 EMILIN1Q9Y6C2 1016 aa24.28■■□□□ 1.48
CLDN7-208ENST00000575313 INSRP06213 1382 aa24.28■■□□□ 1.48
CLDN7-208ENST00000575313 A0A0G2JS52 829 aa24.27■■□□□ 1.48
CLDN7-208ENST00000575313 MYT1Q01538 1121 aa24.27■■□□□ 1.48
CLDN7-208ENST00000575313 CC2D1BQ5T0F9 858 aaKnown RBP24.27■■□□□ 1.48
CLDN7-208ENST00000575313 POLKQ9UBT6 870 aa24.27■■□□□ 1.48
CLDN7-208ENST00000575313 SMG6Q86US8 1419 aaKnown RBP24.27■■□□□ 1.48
CLDN7-208ENST00000575313 PEAK1Q9H792 1746 aa24.26■■□□□ 1.47
CLDN7-208ENST00000575313 FAM208AQ9UK61 1670 aaKnown RBP24.25■■□□□ 1.47
CLDN7-208ENST00000575313 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
CLDN7-208ENST00000575313 LTV1Q96GA3 475 aaPredicted RBP24.25■■□□□ 1.47
CLDN7-208ENST00000575313 NLRP2Q9NX02 1062 aa24.25■■□□□ 1.47
CLDN7-208ENST00000575313 MAP2P11137 1827 aaKnown RBP24.25■■□□□ 1.47
CLDN7-208ENST00000575313 THSD7AQ9UPZ6 1657 aa24.24■■□□□ 1.47
CLDN7-208ENST00000575313 HSP90AB2PQ58FF8 381 aa24.24■■□□□ 1.47
CLDN7-208ENST00000575313 CDCA7Q9BWT1 371 aaPredicted RBP24.23■■□□□ 1.47
CLDN7-208ENST00000575313 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
CLDN7-208ENST00000575313 KRT27Q7Z3Y8 459 aa24.19■■□□□ 1.46
CLDN7-208ENST00000575313 BRWD3Q6RI45 1802 aa24.17■■□□□ 1.46
CLDN7-208ENST00000575313 PARP4Q9UKK3 1724 aaKnown RBP24.16■■□□□ 1.46
CLDN7-208ENST00000575313 WNK3Q9BYP7 1800 aa24.16■■□□□ 1.46
CLDN7-208ENST00000575313 DISP2A7MBM2 1401 aa24.16■■□□□ 1.46
CLDN7-208ENST00000575313 ANP32CO43423 234 aa24.15■■□□□ 1.46
CLDN7-208ENST00000575313 IL2RBP14784 551 aa24.14■■□□□ 1.45
CLDN7-208ENST00000575313 PDE3BQ13370 1112 aa24.14■■□□□ 1.45
CLDN7-208ENST00000575313 NBPF6Q5VWK0 638 aa24.14■■□□□ 1.45
CLDN7-208ENST00000575313 NBPF4Q96M43 638 aa24.14■■□□□ 1.45
CLDN7-208ENST00000575313 MTHFSP49914 203 aa24.13■■□□□ 1.45
CLDN7-208ENST00000575313 DDB1Q16531 1140 aa24.13■■□□□ 1.45
CLDN7-208ENST00000575313 EIF4A2Q14240 407 aaKnown RBP24.11■■□□□ 1.45
CLDN7-208ENST00000575313 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
CLDN7-208ENST00000575313 LRRC37A3O60309 1634 aa24.1■■□□□ 1.45
CLDN7-208ENST00000575313 RGPD2P0DJD1 1756 aa24.1■■□□□ 1.45
CLDN7-208ENST00000575313 EXOC5O00471 708 aa24.09■■□□□ 1.45
CLDN7-208ENST00000575313 RALBP1Q15311 655 aa24.09■■□□□ 1.45
CLDN7-208ENST00000575313 PARD3Q8TEW0 1356 aa24.08■■□□□ 1.45
CLDN7-208ENST00000575313 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
CLDN7-208ENST00000575313 NCAPD2Q15021 1401 aa24.08■■□□□ 1.44
CLDN7-208ENST00000575313 TNS2Q63HR2 1409 aa24.08■■□□□ 1.44
CLDN7-208ENST00000575313 RAPGEF4Q8WZA2 1011 aa24.07■■□□□ 1.44
CLDN7-208ENST00000575313 EYA1Q99502 592 aa24.07■■□□□ 1.44
CLDN7-208ENST00000575313 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
CLDN7-208ENST00000575313 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
CLDN7-208ENST00000575313 UPF1Q92900 1129 aaKnown RBP eCLIP24.05■■□□□ 1.44
CLDN7-208ENST00000575313 TATP17735 454 aaPredicted RBP24.04■■□□□ 1.44
CLDN7-208ENST00000575313 IGSF1Q8N6C5 1336 aa24.04■■□□□ 1.44
CLDN7-208ENST00000575313 MEGF6O75095 1541 aa24.04■■□□□ 1.44
CLDN7-208ENST00000575313 OVOS2A0A0G2JMS6 1433 aa24.03■■□□□ 1.44
CLDN7-208ENST00000575313 IL13P35225 146 aa24.03■■□□□ 1.44
CLDN7-208ENST00000575313 FAM182BQ5T319 152 aa24.03■■□□□ 1.44
CLDN7-208ENST00000575313 MIER1Q8N108 512 aa24.03■■□□□ 1.44
CLDN7-208ENST00000575313 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
CLDN7-208ENST00000575313 DIAPH1O60610 1272 aaKnown RBP24.02■■□□□ 1.44
CLDN7-208ENST00000575313 CCDC125Q86Z20 511 aa24.02■■□□□ 1.44
CLDN7-208ENST00000575313 MARCH10Q8NA82 808 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms