RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 UPF3BQ9BZI7 483 aaKnown RBP25.1■■□□□ 1.61
SCRT1-201ENST00000569446 SMC5Q8IY18 1101 aa25.1■■□□□ 1.61
SCRT1-201ENST00000569446 RSPH6AQ9H0K4 717 aa25.1■■□□□ 1.61
SCRT1-201ENST00000569446 INTS3Q68E01 1043 aaKnown RBP25.09■■□□□ 1.61
SCRT1-201ENST00000569446 CHAMP1Q96JM3 812 aa25.09■■□□□ 1.61
SCRT1-201ENST00000569446 DDX54Q8TDD1 881 aaKnown RBP25.09■■□□□ 1.61
SCRT1-201ENST00000569446 NAP1L2Q9ULW6 460 aaPredicted RBP25.09■■□□□ 1.61
SCRT1-201ENST00000569446 HAP1P54257 671 aaPredicted RBP25.08■■□□□ 1.61
SCRT1-201ENST00000569446 MRPL50Q8N5N7 158 aaKnown RBP25.08■■□□□ 1.61
SCRT1-201ENST00000569446 XPCQ01831 940 aaPredicted RBP25.07■■□□□ 1.6
SCRT1-201ENST00000569446 PLEKHF1Q96S99 279 aa25.07■■□□□ 1.6
SCRT1-201ENST00000569446 ZBTB7BO15156 539 aaPredicted RBP25.07■■□□□ 1.6
SCRT1-201ENST00000569446 GAS2L2Q8NHY3 880 aa25.07■■□□□ 1.6
SCRT1-201ENST00000569446 CLTCL1P53675 1640 aa25.07■■□□□ 1.6
SCRT1-201ENST00000569446 MCCP23508 829 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 MRE11P49959 708 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 EID1Q9Y6B2 187 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 ABCC1P33527 1531 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 CD2BP2O95400 341 aaKnown RBP25.06■■□□□ 1.6
SCRT1-201ENST00000569446 ALDH1L2Q3SY69 923 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 ANXA1P04083 346 aa25.05■■□□□ 1.6
SCRT1-201ENST00000569446 CFAP44Q96MT7 982 aa25.05■■□□□ 1.6
SCRT1-201ENST00000569446 ZNF518AQ6AHZ1 1483 aa25.05■■□□□ 1.6
SCRT1-201ENST00000569446 RRAGDQ9NQL2 400 aaPredicted RBP25.04■■□□□ 1.6
SCRT1-201ENST00000569446 IFT57Q9NWB7 429 aa25.04■■□□□ 1.6
SCRT1-201ENST00000569446 POLR1AO95602 1720 aaPredicted RBP25.04■■□□□ 1.6
SCRT1-201ENST00000569446 AIMP1Q12904 312 aaKnown RBP25.03■■□□□ 1.6
SCRT1-201ENST00000569446 KIAA1211Q6ZU35 1233 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
SCRT1-201ENST00000569446 NASPP49321 788 aaPredicted RBP25.03■■□□□ 1.6
SCRT1-201ENST00000569446 FAM43AQ8N2R8 423 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 REC8O95072 547 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 BMP2KLQ5H9B9 411 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 NUTM1Q86Y26 1132 aa25.02■■□□□ 1.6
SCRT1-201ENST00000569446 ABTB2Q8N961 1025 aa25.02■■□□□ 1.6
SCRT1-201ENST00000569446 TRPM2O94759 1503 aa25.02■■□□□ 1.6
SCRT1-201ENST00000569446 GDPD2Q9HCC8 539 aa25.01■■□□□ 1.59
SCRT1-201ENST00000569446 ZNF330Q9Y3S2 320 aaPredicted RBP25.01■■□□□ 1.59
SCRT1-201ENST00000569446 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
SCRT1-201ENST00000569446 G2E3Q7L622 706 aa25■■□□□ 1.59
SCRT1-201ENST00000569446 EIF4A2Q14240 407 aaKnown RBP24.99■■□□□ 1.59
SCRT1-201ENST00000569446 SDSP20132 328 aa24.99■■□□□ 1.59
SCRT1-201ENST00000569446 RBM27Q9P2N5 1060 aaKnown RBP24.99■■□□□ 1.59
SCRT1-201ENST00000569446 ZGPATQ8N5A5 531 aaKnown RBP24.98■■□□□ 1.59
SCRT1-201ENST00000569446 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
SCRT1-201ENST00000569446 SYNMO15061 1565 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ABCC11Q96J66 1382 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ACEP12821 1306 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ZCCHC11Q5TAX3 1644 aaKnown RBP24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ANTXR1Q9H6X2 564 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 FGD1P98174 961 aa24.96■■□□□ 1.59
SCRT1-201ENST00000569446 BCL11BQ9C0K0 894 aaPredicted RBP24.96■■□□□ 1.59
SCRT1-201ENST00000569446 ZFYVE16Q7Z3T8 1539 aa24.96■■□□□ 1.59
SCRT1-201ENST00000569446 TEFQ10587 303 aa24.96■■□□□ 1.59
SCRT1-201ENST00000569446 UBTFL1P0CB47 393 aaPredicted RBP24.95■■□□□ 1.59
SCRT1-201ENST00000569446 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.59
SCRT1-201ENST00000569446 NSD2O96028 1365 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 E9PCH4 1651 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 UNC13BO14795 1591 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 YTHDC2Q9H6S0 1430 aaKnown RBP24.95■■□□□ 1.58
SCRT1-201ENST00000569446 HDGFL1Q5TGJ6 251 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 MADDQ8WXG6 1647 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 GNAI2P04899 355 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 RABEP1Q15276 862 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 IL13P35225 146 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 SKOR2Q2VWA4 1001 aaPredicted RBP24.94■■□□□ 1.58
SCRT1-201ENST00000569446 PLEKHM2Q8IWE5 1019 aa24.93■■□□□ 1.58
SCRT1-201ENST00000569446 SIRT2Q8IXJ6 389 aa24.93■■□□□ 1.58
SCRT1-201ENST00000569446 PKP1Q13835 747 aa24.93■■□□□ 1.58
SCRT1-201ENST00000569446 IL16Q14005 1332 aa24.92■■□□□ 1.58
SCRT1-201ENST00000569446 ESPNB1AK53 854 aa24.92■■□□□ 1.58
SCRT1-201ENST00000569446 C9orf78Q9NZ63 289 aaPredicted RBP24.92■■□□□ 1.58
SCRT1-201ENST00000569446 PPIP5K1Q6PFW1 1433 aa24.92■■□□□ 1.58
SCRT1-201ENST00000569446 ERC2O15083 957 aa24.91■■□□□ 1.58
SCRT1-201ENST00000569446 LRRFIP2Q9Y608 721 aaKnown RBP24.91■■□□□ 1.58
SCRT1-201ENST00000569446 NUCB2P80303 420 aa24.9■■□□□ 1.58
SCRT1-201ENST00000569446 FOSBP53539 338 aa24.9■■□□□ 1.58
SCRT1-201ENST00000569446 TTC22Q5TAA0 569 aa24.9■■□□□ 1.58
SCRT1-201ENST00000569446 ZNF692Q9BU19 519 aaPredicted RBP24.9■■□□□ 1.58
SCRT1-201ENST00000569446 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
SCRT1-201ENST00000569446 BAG4O95429 457 aaKnown RBP24.89■■□□□ 1.58
SCRT1-201ENST00000569446 GSPT1P15170 499 aaKnown RBP24.89■■□□□ 1.58
SCRT1-201ENST00000569446 SYCE3A1L190 88 aa24.89■■□□□ 1.57
SCRT1-201ENST00000569446 LRRCC1Q9C099 1032 aa24.89■■□□□ 1.57
SCRT1-201ENST00000569446 MTHFSDQ2M296 383 aaKnown RBP24.89■■□□□ 1.57
SCRT1-201ENST00000569446 SIL1Q9H173 461 aa24.89■■□□□ 1.57
SCRT1-201ENST00000569446 HSP90AA2PQ14568 343 aaPredicted RBP24.88■■□□□ 1.57
SCRT1-201ENST00000569446 CSB-PGBD3P0DP91 1061 aa24.88■■□□□ 1.57
SCRT1-201ENST00000569446 RBM10P98175 930 aaKnown RBP24.88■■□□□ 1.57
SCRT1-201ENST00000569446 GLIPR1L2Q4G1C9 344 aa24.88■■□□□ 1.57
SCRT1-201ENST00000569446 VPS37CA5D8V6 355 aaPredicted RBP24.87■■□□□ 1.57
SCRT1-201ENST00000569446 SRGAP3O43295 1099 aa24.87■■□□□ 1.57
SCRT1-201ENST00000569446 PSME1Q06323 249 aa24.87■■□□□ 1.57
SCRT1-201ENST00000569446 RPAP2Q8IXW5 612 aaPredicted RBP24.87■■□□□ 1.57
SCRT1-201ENST00000569446 CWC27Q6UX04 472 aaKnown RBP24.87■■□□□ 1.57
SCRT1-201ENST00000569446 GAS2L3Q86XJ1 694 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 SBNO2Q9Y2G9 1366 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 PLXNC1O60486 1568 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 CEP85Q6P2H3 762 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms