RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 BLMP54132 1417 aaPredicted RBP27.69■■■□□ 2.02
RNF40-210ENST00000566811 FAM83GA6ND36 823 aa27.69■■■□□ 2.02
RNF40-210ENST00000566811 BCL9LQ86UU0 1499 aa27.69■■■□□ 2.02
RNF40-210ENST00000566811 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
RNF40-210ENST00000566811 ATRNO75882 1429 aa27.67■■■□□ 2.02
RNF40-210ENST00000566811 CAMTA1Q9Y6Y1 1673 aa27.66■■■□□ 2.02
RNF40-210ENST00000566811 SOX12O15370 315 aa27.66■■■□□ 2.02
RNF40-210ENST00000566811 COL5A2P05997 1499 aaPredicted RBP27.65■■■□□ 2.02
RNF40-210ENST00000566811 MORC1Q86VD1 984 aa27.65■■■□□ 2.02
RNF40-210ENST00000566811 UNC5CLQ8IV45 518 aa27.65■■■□□ 2.02
RNF40-210ENST00000566811 BTG4Q9NY30 223 aa27.64■■■□□ 2.02
RNF40-210ENST00000566811 SMG6Q86US8 1419 aaKnown RBP27.64■■■□□ 2.02
RNF40-210ENST00000566811 FLT4P35916 1363 aa27.62■■■□□ 2.01
RNF40-210ENST00000566811 DDX10Q13206 875 aaKnown RBP27.62■■■□□ 2.01
RNF40-210ENST00000566811 CHRNA2Q15822 529 aa27.62■■■□□ 2.01
RNF40-210ENST00000566811 MAP3K19Q56UN5 1328 aa27.62■■■□□ 2.01
RNF40-210ENST00000566811 PEAK1Q9H792 1746 aa27.61■■■□□ 2.01
RNF40-210ENST00000566811 SRCAPQ6ZRS2 3230 aa27.59■■■□□ 2.01
RNF40-210ENST00000566811 ZBTB7CA1YPR0 619 aa27.58■■■□□ 2.01
RNF40-210ENST00000566811 VPS72Q15906 364 aa27.58■■■□□ 2.01
RNF40-210ENST00000566811 IP6K1Q92551 441 aa27.58■■■□□ 2.01
RNF40-210ENST00000566811 AMPHP49418 695 aa27.57■■■□□ 2
RNF40-210ENST00000566811 CC2D1BQ5T0F9 858 aaKnown RBP27.56■■■□□ 2
RNF40-210ENST00000566811 ERBB3P21860 1342 aa27.55■■■□□ 2
RNF40-210ENST00000566811 INSRP06213 1382 aa27.55■■■□□ 2
RNF40-210ENST00000566811 CRB1P82279 1406 aa27.55■■■□□ 2
RNF40-210ENST00000566811 HOXC9P31274 260 aa27.54■■■□□ 2
RNF40-210ENST00000566811 EVA1CP58658 441 aa27.54■■■□□ 2
RNF40-210ENST00000566811 RRS1Q15050 365 aaKnown RBP27.54■■■□□ 2
RNF40-210ENST00000566811 WDR17Q8IZU2 1322 aa27.54■■■□□ 2
RNF40-210ENST00000566811 WNK3Q9BYP7 1800 aa27.54■■■□□ 2
RNF40-210ENST00000566811 GLI3P10071 1580 aa27.53■■■□□ 2
RNF40-210ENST00000566811 GJD4Q96KN9 370 aaPredicted RBP27.53■■■□□ 2
RNF40-210ENST00000566811 PARD3Q8TEW0 1356 aa27.52■■■□□ 2
RNF40-210ENST00000566811 POLKQ9UBT6 870 aa27.52■■■□□ 2
RNF40-210ENST00000566811 AXIN2Q9Y2T1 843 aa27.51■■□□□ 1.99
RNF40-210ENST00000566811 EP400Q96L91 3159 aa27.51■■□□□ 1.99
RNF40-210ENST00000566811 TNNT2P45379 298 aaPredicted RBP27.5■■□□□ 1.99
RNF40-210ENST00000566811 SPATA31A5Q5VU36 1347 aa27.49■■□□□ 1.99
RNF40-210ENST00000566811 SPATA31A7Q8IWB4 1347 aa27.49■■□□□ 1.99
RNF40-210ENST00000566811 STRN4Q9NRL3 753 aa27.49■■□□□ 1.99
RNF40-210ENST00000566811 EMILIN1Q9Y6C2 1016 aa27.49■■□□□ 1.99
RNF40-210ENST00000566811 THRAP3Q9Y2W1 955 aaKnown RBP27.48■■□□□ 1.99
RNF40-210ENST00000566811 FBLN1P23142 703 aa27.47■■□□□ 1.99
RNF40-210ENST00000566811 RALBP1Q15311 655 aa27.47■■□□□ 1.99
RNF40-210ENST00000566811 CCDC125Q86Z20 511 aa27.47■■□□□ 1.99
RNF40-210ENST00000566811 ANKRD24Q8TF21 1146 aa27.47■■□□□ 1.99
RNF40-210ENST00000566811 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
RNF40-210ENST00000566811 CSB-PGBD3P0DP91 1061 aa27.46■■□□□ 1.99
RNF40-210ENST00000566811 CCDC9Q9Y3X0 531 aaKnown RBP27.46■■□□□ 1.99
RNF40-210ENST00000566811 LARP1Q6PKG0 1096 aaKnown RBP27.45■■□□□ 1.98
RNF40-210ENST00000566811 THSD7AQ9UPZ6 1657 aa27.45■■□□□ 1.98
RNF40-210ENST00000566811 TOM1L2Q6ZVM7 507 aa27.44■■□□□ 1.98
RNF40-210ENST00000566811 CARD10Q9BWT7 1032 aa27.44■■□□□ 1.98
RNF40-210ENST00000566811 PARP4Q9UKK3 1724 aaKnown RBP27.44■■□□□ 1.98
RNF40-210ENST00000566811 RGPD2P0DJD1 1756 aa27.43■■□□□ 1.98
RNF40-210ENST00000566811 PPM1GO15355 546 aaPredicted RBP27.43■■□□□ 1.98
RNF40-210ENST00000566811 HSP90AB2PQ58FF8 381 aa27.41■■□□□ 1.98
RNF40-210ENST00000566811 BARGINQ6ZT62 677 aa27.41■■□□□ 1.98
RNF40-210ENST00000566811 TCP11L2Q8N4U5 519 aa27.41■■□□□ 1.98
RNF40-210ENST00000566811 MTHFSP49914 203 aa27.39■■□□□ 1.98
RNF40-210ENST00000566811 CDCA7Q9BWT1 371 aaPredicted RBP27.39■■□□□ 1.98
RNF40-210ENST00000566811 NCAPD2Q15021 1401 aa27.39■■□□□ 1.97
RNF40-210ENST00000566811 RGPD1P0DJD0 1748 aa27.38■■□□□ 1.97
RNF40-210ENST00000566811 ONECUT3O60422 494 aaPredicted RBP27.38■■□□□ 1.97
RNF40-210ENST00000566811 PLEKHG2Q9H7P9 1386 aa27.37■■□□□ 1.97
RNF40-210ENST00000566811 PPP2R1AP30153 589 aa27.37■■□□□ 1.97
RNF40-210ENST00000566811 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
RNF40-210ENST00000566811 CFAP53Q96M91 514 aa27.37■■□□□ 1.97
RNF40-210ENST00000566811 NLRP2Q9NX02 1062 aa27.37■■□□□ 1.97
RNF40-210ENST00000566811 COL3A1P02461 1466 aaPredicted RBP27.36■■□□□ 1.97
RNF40-210ENST00000566811 MYBBP1AQ9BQG0 1328 aaKnown RBP27.36■■□□□ 1.97
RNF40-210ENST00000566811 LRRC37A3O60309 1634 aa27.35■■□□□ 1.97
RNF40-210ENST00000566811 BRWD3Q6RI45 1802 aa27.35■■□□□ 1.97
RNF40-210ENST00000566811 LTV1Q96GA3 475 aaPredicted RBP27.35■■□□□ 1.97
RNF40-210ENST00000566811 DISP2A7MBM2 1401 aa27.34■■□□□ 1.97
RNF40-210ENST00000566811 PRKRIP1Q9H875 184 aaPredicted RBP27.34■■□□□ 1.97
RNF40-210ENST00000566811 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
RNF40-210ENST00000566811 DEFB132Q7Z7B7 95 aa27.32■■□□□ 1.96
RNF40-210ENST00000566811 SEPT12Q8IYM1 358 aa27.32■■□□□ 1.96
RNF40-210ENST00000566811 USP35Q9P2H5 1018 aa27.32■■□□□ 1.96
RNF40-210ENST00000566811 FAM98CQ17RN3 349 aaKnown RBP27.31■■□□□ 1.96
RNF40-210ENST00000566811 IGSF1Q8N6C5 1336 aa27.3■■□□□ 1.96
RNF40-210ENST00000566811 DIAPH1O60610 1272 aaKnown RBP27.29■■□□□ 1.96
RNF40-210ENST00000566811 ANP32CO43423 234 aa27.28■■□□□ 1.96
RNF40-210ENST00000566811 PKD1L3Q7Z443 1732 aa27.27■■□□□ 1.96
RNF40-210ENST00000566811 TNS2Q63HR2 1409 aa27.27■■□□□ 1.96
RNF40-210ENST00000566811 IL2RBP14784 551 aa27.27■■□□□ 1.96
RNF40-210ENST00000566811 NBPF6Q5VWK0 638 aa27.27■■□□□ 1.96
RNF40-210ENST00000566811 NBPF4Q96M43 638 aa27.27■■□□□ 1.96
RNF40-210ENST00000566811 IL13P35225 146 aa27.26■■□□□ 1.95
RNF40-210ENST00000566811 KDRP35968 1356 aa27.25■■□□□ 1.95
RNF40-210ENST00000566811 A0A0G2JS52 829 aa27.25■■□□□ 1.95
RNF40-210ENST00000566811 MYT1Q01538 1121 aa27.25■■□□□ 1.95
RNF40-210ENST00000566811 EYA1Q99502 592 aa27.25■■□□□ 1.95
RNF40-210ENST00000566811 OVOS2A0A0G2JMS6 1433 aa27.24■■□□□ 1.95
RNF40-210ENST00000566811 NUDCQ9Y266 331 aa27.24■■□□□ 1.95
RNF40-210ENST00000566811 SF3B2Q13435 895 aaKnown RBP27.23■■□□□ 1.95
RNF40-210ENST00000566811 RAPGEF4Q8WZA2 1011 aa27.23■■□□□ 1.95
RNF40-210ENST00000566811 MEGF6O75095 1541 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms