RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RREB1Q92766 1687 aa15.06■□□□□ 0
SF3B3-205ENST00000564899 NUP188Q5SRE5 1749 aa15.06■□□□□ 0
SF3B3-205ENST00000564899 PARD3Q8TEW0 1356 aa15.06■□□□□ 0
SF3B3-205ENST00000564899 USP6P35125 1406 aa15.06■□□□□ 0
SF3B3-205ENST00000564899 CHRNA2Q15822 529 aa15.05■□□□□ -0
SF3B3-205ENST00000564899 NSD2O96028 1365 aa15.05■□□□□ -0
SF3B3-205ENST00000564899 MON2Q7Z3U7 1717 aa15.05■□□□□ -0
SF3B3-205ENST00000564899 AKAP12Q02952 1782 aa15.04■□□□□ -0
SF3B3-205ENST00000564899 SPATA31A1Q5TZJ5 1347 aa15.04■□□□□ -0
SF3B3-205ENST00000564899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.04■□□□□ -0
SF3B3-205ENST00000564899 PHRF1Q9P1Y6 1649 aaKnown RBP15.03■□□□□ -0
SF3B3-205ENST00000564899 KIAA0232Q92628 1395 aa15.03■□□□□ -0
SF3B3-205ENST00000564899 TTC21BQ7Z4L5 1316 aa15.02■□□□□ -0
SF3B3-205ENST00000564899 MYBBP1AQ9BQG0 1328 aaKnown RBP15.02■□□□□ -0
SF3B3-205ENST00000564899 CCER2I3L3R5 266 aa15.02■□□□□ -0
SF3B3-205ENST00000564899 APBA3O96018 575 aa15.02■□□□□ -0
SF3B3-205ENST00000564899 YY1P25490 414 aa15.02■□□□□ -0
SF3B3-205ENST00000564899 PRDM11Q9NQV5 511 aa15.02■□□□□ -0
SF3B3-205ENST00000564899 STRN4Q9NRL3 753 aa15.02■□□□□ -0
SF3B3-205ENST00000564899 NRKQ7Z2Y5 1582 aa15.02□□□□□ -0.01
SF3B3-205ENST00000564899 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
SF3B3-205ENST00000564899 CAMTA1Q9Y6Y1 1673 aa15.01□□□□□ -0.01
SF3B3-205ENST00000564899 FYB1O15117 783 aa15.01□□□□□ -0.01
SF3B3-205ENST00000564899 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
SF3B3-205ENST00000564899 GGNBP2Q9H3C7 697 aa15.01□□□□□ -0.01
SF3B3-205ENST00000564899 USP35Q9P2H5 1018 aa15.01□□□□□ -0.01
SF3B3-205ENST00000564899 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
SF3B3-205ENST00000564899 NUTM2GQ5VZR2 741 aa15□□□□□ -0.01
SF3B3-205ENST00000564899 NME9Q86XW9 330 aa15□□□□□ -0.01
SF3B3-205ENST00000564899 BRD4O60885 1362 aaPredicted RBP14.99□□□□□ -0.01
SF3B3-205ENST00000564899 TTC21AQ8NDW8 1320 aa14.99□□□□□ -0.01
SF3B3-205ENST00000564899 ZC3H6P61129 1189 aaKnown RBP14.99□□□□□ -0.01
SF3B3-205ENST00000564899 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
SF3B3-205ENST00000564899 NLRP13Q86W25 1043 aa14.98□□□□□ -0.01
SF3B3-205ENST00000564899 KIF20BQ96Q89 1820 aa14.98□□□□□ -0.01
SF3B3-205ENST00000564899 PPP2R1AP30153 589 aa14.97□□□□□ -0.01
SF3B3-205ENST00000564899 COG3Q96JB2 828 aa14.96□□□□□ -0.01
SF3B3-205ENST00000564899 MRS2Q9HD23 443 aa14.96□□□□□ -0.01
SF3B3-205ENST00000564899 ANKRD26Q9UPS8 1709 aa14.95□□□□□ -0.02
SF3B3-205ENST00000564899 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
SF3B3-205ENST00000564899 LARP1Q6PKG0 1096 aaKnown RBP14.95□□□□□ -0.02
SF3B3-205ENST00000564899 PDGFDQ9GZP0 370 aaPredicted RBP14.95□□□□□ -0.02
SF3B3-205ENST00000564899 LMO7Q8WWI1 1683 aa14.95□□□□□ -0.02
SF3B3-205ENST00000564899 OVOS2A0A0J9YW53 1432 aa14.94□□□□□ -0.02
SF3B3-205ENST00000564899 OVOS2Q6IE36 1432 aa14.94□□□□□ -0.02
SF3B3-205ENST00000564899 CCDC184Q52MB2 194 aa14.94□□□□□ -0.02
SF3B3-205ENST00000564899 PTF1AQ7RTS3 328 aa14.94□□□□□ -0.02
SF3B3-205ENST00000564899 ANO8Q9HCE9 1232 aaPredicted RBP14.93□□□□□ -0.02
SF3B3-205ENST00000564899 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
SF3B3-205ENST00000564899 PEAK1Q9H792 1746 aa14.92□□□□□ -0.02
SF3B3-205ENST00000564899 ABTB2Q8N961 1025 aa14.92□□□□□ -0.02
SF3B3-205ENST00000564899 PIK3C2AO00443 1686 aa14.92□□□□□ -0.02
SF3B3-205ENST00000564899 BARGINQ6ZT62 677 aa14.91□□□□□ -0.02
SF3B3-205ENST00000564899 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
SF3B3-205ENST00000564899 NLRP6P59044 892 aa14.9□□□□□ -0.02
SF3B3-205ENST00000564899 PDE3BQ13370 1112 aa14.9□□□□□ -0.02
SF3B3-205ENST00000564899 GOLGB1Q14789 3259 aaKnown RBP14.9□□□□□ -0.02
SF3B3-205ENST00000564899 PARP4Q9UKK3 1724 aaKnown RBP14.89□□□□□ -0.03
SF3B3-205ENST00000564899 AATKQ6ZMQ8 1374 aa14.89□□□□□ -0.03
SF3B3-205ENST00000564899 KCNQ2O43526 872 aa14.89□□□□□ -0.03
SF3B3-205ENST00000564899 SPON1Q9HCB6 807 aa14.89□□□□□ -0.03
SF3B3-205ENST00000564899 LRRC37A3O60309 1634 aa14.88□□□□□ -0.03
SF3B3-205ENST00000564899 TCP11L2Q8N4U5 519 aa14.88□□□□□ -0.03
SF3B3-205ENST00000564899 PPP1R1BQ9UD71 204 aaPredicted RBP14.88□□□□□ -0.03
SF3B3-205ENST00000564899 COL5A2P05997 1499 aaPredicted RBP14.88□□□□□ -0.03
SF3B3-205ENST00000564899 SBF2Q86WG5 1849 aa14.87□□□□□ -0.03
SF3B3-205ENST00000564899 USP54Q70EL1 1684 aa14.87□□□□□ -0.03
SF3B3-205ENST00000564899 MTHFSP49914 203 aa14.87□□□□□ -0.03
SF3B3-205ENST00000564899 EVA1CP58658 441 aa14.87□□□□□ -0.03
SF3B3-205ENST00000564899 NBPF14Q5TI25 921 aa14.87□□□□□ -0.03
SF3B3-205ENST00000564899 USP19O94966 1318 aa14.87□□□□□ -0.03
SF3B3-205ENST00000564899 SOX12O15370 315 aa14.86□□□□□ -0.03
SF3B3-205ENST00000564899 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
SF3B3-205ENST00000564899 CPDO75976 1380 aa14.85□□□□□ -0.03
SF3B3-205ENST00000564899 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
SF3B3-205ENST00000564899 FBLN1P23142 703 aa14.85□□□□□ -0.03
SF3B3-205ENST00000564899 RRS1Q15050 365 aaKnown RBP14.85□□□□□ -0.03
SF3B3-205ENST00000564899 POLKQ9UBT6 870 aa14.85□□□□□ -0.03
SF3B3-205ENST00000564899 CEP350Q5VT06 3117 aa14.85□□□□□ -0.03
SF3B3-205ENST00000564899 RGPD3A6NKT7 1758 aaPredicted RBP14.84□□□□□ -0.03
SF3B3-205ENST00000564899 RGPD4Q7Z3J3 1758 aa14.84□□□□□ -0.03
SF3B3-205ENST00000564899 ZBTB7AO95365 584 aa14.84□□□□□ -0.03
SF3B3-205ENST00000564899 FAM9BQ8IZU0 186 aa14.84□□□□□ -0.03
SF3B3-205ENST00000564899 PROM2Q8N271 834 aa14.84□□□□□ -0.03
SF3B3-205ENST00000564899 PNISRQ8TF01 805 aaKnown RBP14.84□□□□□ -0.03
SF3B3-205ENST00000564899 EMILIN1Q9Y6C2 1016 aa14.84□□□□□ -0.03
SF3B3-205ENST00000564899 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
SF3B3-205ENST00000564899 PTGER2P43116 358 aa14.83□□□□□ -0.04
SF3B3-205ENST00000564899 ZNF784Q8NCA9 323 aaPredicted RBP14.83□□□□□ -0.04
SF3B3-205ENST00000564899 KCNH5Q8NCM2 988 aa14.83□□□□□ -0.04
SF3B3-205ENST00000564899 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.04
SF3B3-205ENST00000564899 SLIT3O75094 1523 aa14.82□□□□□ -0.04
SF3B3-205ENST00000564899 YTHDC1Q96MU7 727 aaKnown RBP14.82□□□□□ -0.04
SF3B3-205ENST00000564899 WNK3Q9BYP7 1800 aa14.81□□□□□ -0.04
SF3B3-205ENST00000564899 ZBTB7CA1YPR0 619 aa14.81□□□□□ -0.04
SF3B3-205ENST00000564899 GCP02774 474 aa14.81□□□□□ -0.04
SF3B3-205ENST00000564899 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
SF3B3-205ENST00000564899 MAP3K19Q56UN5 1328 aa14.81□□□□□ -0.04
SF3B3-205ENST00000564899 CRB1P82279 1406 aa14.81□□□□□ -0.04
SF3B3-205ENST00000564899 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms