RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 KDM5AP29375 1690 aaKnown RBP9.34□□□□□ -0.91
TCF4-216ENST00000562680 ALDH1L2Q3SY69 923 aa9.34□□□□□ -0.91
TCF4-216ENST00000562680 DIP2BQ9P265 1576 aa9.34□□□□□ -0.91
TCF4-216ENST00000562680 SYNMO15061 1565 aa9.34□□□□□ -0.91
TCF4-216ENST00000562680 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
TCF4-216ENST00000562680 LRRFIP1Q32MZ4 808 aaKnown RBP9.34□□□□□ -0.91
TCF4-216ENST00000562680 CHMP3Q9Y3E7 222 aa9.34□□□□□ -0.91
TCF4-216ENST00000562680 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
TCF4-216ENST00000562680 CCT4P50991 539 aaKnown RBP9.34□□□□□ -0.91
TCF4-216ENST00000562680 ZC3H6P61129 1189 aaKnown RBP9.34□□□□□ -0.91
TCF4-216ENST00000562680 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
TCF4-216ENST00000562680 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
TCF4-216ENST00000562680 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.92
TCF4-216ENST00000562680 NKTRP30414 1462 aaKnown RBP9.33□□□□□ -0.92
TCF4-216ENST00000562680 BCL11BQ9C0K0 894 aaPredicted RBP9.33□□□□□ -0.92
TCF4-216ENST00000562680 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
TCF4-216ENST00000562680 APBB1O00213 710 aa9.33□□□□□ -0.92
TCF4-216ENST00000562680 TOM1O60784 492 aa9.33□□□□□ -0.92
TCF4-216ENST00000562680 CABP4P57796 275 aa9.33□□□□□ -0.92
TCF4-216ENST00000562680 XPCQ01831 940 aaPredicted RBP9.33□□□□□ -0.92
TCF4-216ENST00000562680 APPP05067 770 aa9.33□□□□□ -0.92
TCF4-216ENST00000562680 MAP3K4Q9Y6R4 1608 aa9.33□□□□□ -0.92
TCF4-216ENST00000562680 HTATSF1O43719 755 aaKnown RBP9.33□□□□□ -0.92
TCF4-216ENST00000562680 CLTCL1P53675 1640 aa9.33□□□□□ -0.92
TCF4-216ENST00000562680 ZMYM4Q5VZL5 1548 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 ARHGEF40Q8TER5 1519 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 LTKP29376 864 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 FGD1P98174 961 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 ATF7IPQ6VMQ6 1270 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 CARD14Q9BXL6 1004 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 FAM161AQ3B820 660 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 UBTFL1P0CB47 393 aaPredicted RBP9.32□□□□□ -0.92
TCF4-216ENST00000562680 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
TCF4-216ENST00000562680 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
TCF4-216ENST00000562680 A2ML1A8K2U0 1454 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 ADGRB3O60242 1522 aa9.32□□□□□ -0.92
TCF4-216ENST00000562680 TAF7Q15545 349 aaPredicted RBP9.31□□□□□ -0.92
TCF4-216ENST00000562680 ANKRD45Q5TZF3 282 aa9.31□□□□□ -0.92
TCF4-216ENST00000562680 TSR2Q969E8 191 aaKnown RBP9.31□□□□□ -0.92
TCF4-216ENST00000562680 ATP7BP35670 1465 aa9.31□□□□□ -0.92
TCF4-216ENST00000562680 POLKQ9UBT6 870 aa9.31□□□□□ -0.92
TCF4-216ENST00000562680 KIDINS220Q9ULH0 1771 aa9.3□□□□□ -0.92
TCF4-216ENST00000562680 G3BP1Q13283 466 aaKnown RBP eCLIP9.3□□□□□ -0.92
TCF4-216ENST00000562680 PANK1Q8TE04 598 aa9.3□□□□□ -0.92
TCF4-216ENST00000562680 GCC1Q96CN9 775 aa9.3□□□□□ -0.92
TCF4-216ENST00000562680 CAMSAP1Q5T5Y3 1602 aa9.3□□□□□ -0.92
TCF4-216ENST00000562680 HMGB1P09429 215 aaKnown RBP9.3□□□□□ -0.92
TCF4-216ENST00000562680 RBM10P98175 930 aaKnown RBP9.3□□□□□ -0.92
TCF4-216ENST00000562680 ABCA6Q8N139 1617 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 BTBD11A6QL63 1104 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 E9PCH4 1651 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 MVPQ14764 893 aaKnown RBP9.29□□□□□ -0.92
TCF4-216ENST00000562680 RUFY2Q8WXA3 655 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 LAMC1P11047 1609 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 SLC4A2P04920 1241 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 HSPA2P54652 639 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 KIF6Q6ZMV9 814 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 CHMP4CQ96CF2 233 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 SBNO1A3KN83 1393 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 ARHGEF10O15013 1369 aa9.29□□□□□ -0.92
TCF4-216ENST00000562680 SOS1Q07889 1333 aaPredicted RBP9.29□□□□□ -0.92
TCF4-216ENST00000562680 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 SETBP1Q9Y6X0 1596 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 GNAI2P04899 355 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 SRCIN1Q9C0H9 1055 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 FANCIQ9NVI1 1328 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 ERC1Q8IUD2 1116 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 NOB1Q9ULX3 412 aaKnown RBP9.28□□□□□ -0.92
TCF4-216ENST00000562680 ERC2O15083 957 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 PAXIP1Q6ZW49 1069 aaPredicted RBP9.28□□□□□ -0.92
TCF4-216ENST00000562680 USP35Q9P2H5 1018 aa9.28□□□□□ -0.92
TCF4-216ENST00000562680 METP08581 1390 aa9.27□□□□□ -0.92
TCF4-216ENST00000562680 REC8O95072 547 aa9.27□□□□□ -0.92
TCF4-216ENST00000562680 RBM33Q96EV2 1170 aaKnown RBP9.27□□□□□ -0.92
TCF4-216ENST00000562680 TRPM1Q7Z4N2 1603 aa9.27□□□□□ -0.93
TCF4-216ENST00000562680 CEP152O94986 1710 aa9.27□□□□□ -0.93
TCF4-216ENST00000562680 IFIT2P09913 472 aaKnown RBP9.27□□□□□ -0.93
TCF4-216ENST00000562680 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
TCF4-216ENST00000562680 IP6K1Q92551 441 aa9.27□□□□□ -0.93
TCF4-216ENST00000562680 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
TCF4-216ENST00000562680 LRRC59Q96AG4 307 aaKnown RBP9.27□□□□□ -0.93
TCF4-216ENST00000562680 PPRC1Q5VV67 1664 aaKnown RBP9.27□□□□□ -0.93
TCF4-216ENST00000562680 NUTM2BA6NNL0 878 aaPredicted RBP9.26□□□□□ -0.93
TCF4-216ENST00000562680 NUTM2EB1AL46 878 aaPredicted RBP9.26□□□□□ -0.93
TCF4-216ENST00000562680 EIF4A2Q14240 407 aaKnown RBP9.26□□□□□ -0.93
TCF4-216ENST00000562680 NUTM2AQ8IVF1 878 aaPredicted RBP9.26□□□□□ -0.93
TCF4-216ENST00000562680 RPAP2Q8IXW5 612 aaPredicted RBP9.26□□□□□ -0.93
TCF4-216ENST00000562680 PIP4K2BP78356 416 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
TCF4-216ENST00000562680 ANKARQ7Z5J8 1434 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 NEURL4Q96JN8 1562 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 TEX13AQ9BXU3 409 aaPredicted RBP9.26□□□□□ -0.93
TCF4-216ENST00000562680 PTPRCP08575 1304 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 BCAR3O75815 825 aa9.26□□□□□ -0.93
TCF4-216ENST00000562680 GCP02774 474 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms