RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 PEAK1Q9H792 1746 aa15.69■□□□□ 0.1
HERC1-214ENST00000561400 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
HERC1-214ENST00000561400 ARHGEF25Q86VW2 580 aa15.68■□□□□ 0.1
HERC1-214ENST00000561400 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
HERC1-214ENST00000561400 KIAA0232Q92628 1395 aa15.68■□□□□ 0.1
HERC1-214ENST00000561400 RGPD5Q99666 1765 aa15.67■□□□□ 0.1
HERC1-214ENST00000561400 MYBBP1AQ9BQG0 1328 aaKnown RBP15.67■□□□□ 0.1
HERC1-214ENST00000561400 COL18A1P39060 1754 aa15.67■□□□□ 0.1
HERC1-214ENST00000561400 CPDO75976 1380 aa15.67■□□□□ 0.1
HERC1-214ENST00000561400 LRP6O75581 1613 aa15.67■□□□□ 0.1
HERC1-214ENST00000561400 MTHFSP49914 203 aa15.67■□□□□ 0.1
HERC1-214ENST00000561400 ZBTB7CA1YPR0 619 aa15.66■□□□□ 0.1
HERC1-214ENST00000561400 ADAMTS2O95450 1211 aa15.66■□□□□ 0.1
HERC1-214ENST00000561400 MIER1Q8N108 512 aa15.66■□□□□ 0.1
HERC1-214ENST00000561400 SMG6Q86US8 1419 aaKnown RBP15.66■□□□□ 0.1
HERC1-214ENST00000561400 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
HERC1-214ENST00000561400 CHRNA2Q15822 529 aa15.66■□□□□ 0.1
HERC1-214ENST00000561400 FAM83GA6ND36 823 aa15.64■□□□□ 0.09
HERC1-214ENST00000561400 PRDM11Q9NQV5 511 aa15.64■□□□□ 0.09
HERC1-214ENST00000561400 PDE4CQ08493 712 aa15.64■□□□□ 0.09
HERC1-214ENST00000561400 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
HERC1-214ENST00000561400 AXIN2Q9Y2T1 843 aa15.64■□□□□ 0.09
HERC1-214ENST00000561400 LMO7Q8WWI1 1683 aa15.64■□□□□ 0.09
HERC1-214ENST00000561400 AMPHP49418 695 aa15.63■□□□□ 0.09
HERC1-214ENST00000561400 HOXC9P31274 260 aa15.63■□□□□ 0.09
HERC1-214ENST00000561400 CCDC184Q52MB2 194 aa15.63■□□□□ 0.09
HERC1-214ENST00000561400 FLT4P35916 1363 aa15.62■□□□□ 0.09
HERC1-214ENST00000561400 HSP90AB2PQ58FF8 381 aa15.62■□□□□ 0.09
HERC1-214ENST00000561400 IP6K1Q92551 441 aa15.62■□□□□ 0.09
HERC1-214ENST00000561400 COL14A1Q05707 1796 aaKnown RBP15.62■□□□□ 0.09
HERC1-214ENST00000561400 CDK12Q9NYV4 1490 aaPredicted RBP15.62■□□□□ 0.09
HERC1-214ENST00000561400 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
HERC1-214ENST00000561400 CAMTA1Q9Y6Y1 1673 aa15.62■□□□□ 0.09
HERC1-214ENST00000561400 RTL1A6NKG5 1358 aa15.61■□□□□ 0.09
HERC1-214ENST00000561400 PLCH1Q4KWH8 1693 aa15.61■□□□□ 0.09
HERC1-214ENST00000561400 ABCC6O95255 1503 aa15.6■□□□□ 0.09
HERC1-214ENST00000561400 COL3A1P02461 1466 aaPredicted RBP15.6■□□□□ 0.09
HERC1-214ENST00000561400 INSRP06213 1382 aa15.59■□□□□ 0.09
HERC1-214ENST00000561400 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
HERC1-214ENST00000561400 BLMP54132 1417 aaPredicted RBP15.58■□□□□ 0.08
HERC1-214ENST00000561400 BTG4Q9NY30 223 aa15.58■□□□□ 0.08
HERC1-214ENST00000561400 RGPD2P0DJD1 1756 aa15.58■□□□□ 0.08
HERC1-214ENST00000561400 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
HERC1-214ENST00000561400 NGLY1Q96IV0 654 aa15.57■□□□□ 0.08
HERC1-214ENST00000561400 SLIT2O94813 1529 aa15.57■□□□□ 0.08
HERC1-214ENST00000561400 EIF4A2Q14240 407 aaKnown RBP15.56■□□□□ 0.08
HERC1-214ENST00000561400 MEX3CQ5U5Q3 659 aaKnown RBP15.56■□□□□ 0.08
HERC1-214ENST00000561400 LTV1Q96GA3 475 aaPredicted RBP15.56■□□□□ 0.08
HERC1-214ENST00000561400 CFAP53Q96M91 514 aa15.56■□□□□ 0.08
HERC1-214ENST00000561400 COL5A2P05997 1499 aaPredicted RBP15.56■□□□□ 0.08
HERC1-214ENST00000561400 NRAPQ86VF7 1730 aa15.56■□□□□ 0.08
HERC1-214ENST00000561400 ANKRD24Q8TF21 1146 aa15.56■□□□□ 0.08
HERC1-214ENST00000561400 ERBB3P21860 1342 aa15.56■□□□□ 0.08
HERC1-214ENST00000561400 IL13P35225 146 aa15.55■□□□□ 0.08
HERC1-214ENST00000561400 MRS2Q9HD23 443 aa15.55■□□□□ 0.08
HERC1-214ENST00000561400 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
HERC1-214ENST00000561400 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
HERC1-214ENST00000561400 FNBP4Q8N3X1 1017 aaPredicted RBP15.55■□□□□ 0.08
HERC1-214ENST00000561400 BCL9LQ86UU0 1499 aa15.54■□□□□ 0.08
HERC1-214ENST00000561400 RGPD1P0DJD0 1748 aa15.54■□□□□ 0.08
HERC1-214ENST00000561400 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
HERC1-214ENST00000561400 FAM208AQ9UK61 1670 aaKnown RBP15.52■□□□□ 0.08
HERC1-214ENST00000561400 EVA1CP58658 441 aa15.52■□□□□ 0.07
HERC1-214ENST00000561400 LARP1Q6PKG0 1096 aaKnown RBP15.52■□□□□ 0.07
HERC1-214ENST00000561400 AFF2P51816 1311 aa15.52■□□□□ 0.07
HERC1-214ENST00000561400 WDR17Q8IZU2 1322 aa15.52■□□□□ 0.07
HERC1-214ENST00000561400 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.51■□□□□ 0.07
HERC1-214ENST00000561400 NBPF6Q5VWK0 638 aa15.51■□□□□ 0.07
HERC1-214ENST00000561400 NBPF4Q96M43 638 aa15.51■□□□□ 0.07
HERC1-214ENST00000561400 EYA1Q99502 592 aa15.51■□□□□ 0.07
HERC1-214ENST00000561400 CSB-PGBD3P0DP91 1061 aa15.51■□□□□ 0.07
HERC1-214ENST00000561400 UNC5CLQ8IV45 518 aa15.51■□□□□ 0.07
HERC1-214ENST00000561400 USP21Q9UK80 565 aa15.51■□□□□ 0.07
HERC1-214ENST00000561400 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
HERC1-214ENST00000561400 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
HERC1-214ENST00000561400 FGD1P98174 961 aa15.49■□□□□ 0.07
HERC1-214ENST00000561400 TOM1L2Q6ZVM7 507 aa15.49■□□□□ 0.07
HERC1-214ENST00000561400 IGSF1Q8N6C5 1336 aa15.49■□□□□ 0.07
HERC1-214ENST00000561400 USHBP1Q8N6Y0 703 aa15.49■□□□□ 0.07
HERC1-214ENST00000561400 NLRP2Q9NX02 1062 aa15.49■□□□□ 0.07
HERC1-214ENST00000561400 NUDCQ9Y266 331 aa15.49■□□□□ 0.07
HERC1-214ENST00000561400 CRB1P82279 1406 aa15.48■□□□□ 0.07
HERC1-214ENST00000561400 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
HERC1-214ENST00000561400 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.072e-11■■□□□ 11.9
HERC1-214ENST00000561400 AEBP1Q8IUX7 1158 aa15.47■□□□□ 0.07
HERC1-214ENST00000561400 NCAPD2Q15021 1401 aa15.47■□□□□ 0.07
HERC1-214ENST00000561400 HMOX1P09601 288 aa15.47■□□□□ 0.07
HERC1-214ENST00000561400 CARD10Q9BWT7 1032 aa15.47■□□□□ 0.07
HERC1-214ENST00000561400 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
HERC1-214ENST00000561400 WDR43Q15061 677 aaKnown RBP eCLIP15.46■□□□□ 0.072e-6■■■□□ 15.7
HERC1-214ENST00000561400 SULT6B1Q6IMI4 303 aa15.46■□□□□ 0.07
HERC1-214ENST00000561400 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
HERC1-214ENST00000561400 VPS72Q15906 364 aa15.45■□□□□ 0.06
HERC1-214ENST00000561400 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
HERC1-214ENST00000561400 KDRP35968 1356 aa15.45■□□□□ 0.06
HERC1-214ENST00000561400 SPATA31A5Q5VU36 1347 aa15.45■□□□□ 0.06
HERC1-214ENST00000561400 SPATA31A7Q8IWB4 1347 aa15.45■□□□□ 0.06
HERC1-214ENST00000561400 RTN4Q9NQC3 1192 aaKnown RBP15.45■□□□□ 0.06
HERC1-214ENST00000561400 SPATA31A1Q5TZJ5 1347 aa15.45■□□□□ 0.06
HERC1-214ENST00000561400 ATRNO75882 1429 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms