RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 OVOS2A0A0J9YW53 1432 aa9.85□□□□□ -0.83
SPG11-224ENST00000561268 OVOS2Q6IE36 1432 aa9.85□□□□□ -0.83
SPG11-224ENST00000561268 RGPD2P0DJD1 1756 aa9.85□□□□□ -0.83
SPG11-224ENST00000561268 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
SPG11-224ENST00000561268 USP31Q70CQ4 1352 aa9.84□□□□□ -0.83
SPG11-224ENST00000561268 NINLQ9Y2I6 1382 aa9.84□□□□□ -0.83
SPG11-224ENST00000561268 SPATA31A1Q5TZJ5 1347 aa9.83□□□□□ -0.84
SPG11-224ENST00000561268 EDC4Q6P2E9 1401 aaKnown RBP9.83□□□□□ -0.84
SPG11-224ENST00000561268 HAP1P54257 671 aaPredicted RBP9.83□□□□□ -0.84
SPG11-224ENST00000561268 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
SPG11-224ENST00000561268 LMOD2Q6P5Q4 547 aa9.83□□□□□ -0.84
SPG11-224ENST00000561268 PRDM11Q9NQV5 511 aa9.83□□□□□ -0.84
SPG11-224ENST00000561268 BTG4Q9NY30 223 aa9.83□□□□□ -0.84
SPG11-224ENST00000561268 AATKQ6ZMQ8 1374 aa9.83□□□□□ -0.84
SPG11-224ENST00000561268 NHSQ6T4R5 1651 aa9.83□□□□□ -0.84
SPG11-224ENST00000561268 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
SPG11-224ENST00000561268 CLSPNQ9HAW4 1339 aa9.82□□□□□ -0.84
SPG11-224ENST00000561268 CRB1P82279 1406 aa9.82□□□□□ -0.84
SPG11-224ENST00000561268 EVX2Q03828 476 aa9.82□□□□□ -0.84
SPG11-224ENST00000561268 NEUROD1Q13562 356 aa9.82□□□□□ -0.84
SPG11-224ENST00000561268 CCDC125Q86Z20 511 aa9.82□□□□□ -0.84
SPG11-224ENST00000561268 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
SPG11-224ENST00000561268 PUS7Q96PZ0 661 aaKnown RBP9.82□□□□□ -0.84
SPG11-224ENST00000561268 A0A1W2PP64 1363 aa9.81□□□□□ -0.84
SPG11-224ENST00000561268 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
SPG11-224ENST00000561268 TESK2Q96S53 571 aa9.81□□□□□ -0.84
SPG11-224ENST00000561268 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
SPG11-224ENST00000561268 BARGINQ6ZT62 677 aa9.8□□□□□ -0.84
SPG11-224ENST00000561268 NLRP13Q86W25 1043 aa9.8□□□□□ -0.84
SPG11-224ENST00000561268 ABTB2Q8N961 1025 aa9.8□□□□□ -0.84
SPG11-224ENST00000561268 CABP1Q9NZU7 370 aa9.8□□□□□ -0.84
SPG11-224ENST00000561268 BCL9O00512 1426 aa9.8□□□□□ -0.84
SPG11-224ENST00000561268 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
SPG11-224ENST00000561268 GCP02774 474 aa9.79□□□□□ -0.84
SPG11-224ENST00000561268 KRT27Q7Z3Y8 459 aa9.79□□□□□ -0.84
SPG11-224ENST00000561268 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
SPG11-224ENST00000561268 CARD11Q9BXL7 1154 aa9.79□□□□□ -0.84
SPG11-224ENST00000561268 QSER1Q2KHR3 1735 aa9.79□□□□□ -0.84
SPG11-224ENST00000561268 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
SPG11-224ENST00000561268 USP47Q96K76 1375 aa9.78□□□□□ -0.84
SPG11-224ENST00000561268 BTAF1O14981 1849 aa9.78□□□□□ -0.84
SPG11-224ENST00000561268 CHRNA2Q15822 529 aa9.78□□□□□ -0.84
SPG11-224ENST00000561268 FAM98CQ17RN3 349 aaKnown RBP9.78□□□□□ -0.84
SPG11-224ENST00000561268 MAP2P11137 1827 aaKnown RBP9.77□□□□□ -0.84
SPG11-224ENST00000561268 PKD1L3Q7Z443 1732 aa9.77□□□□□ -0.85
SPG11-224ENST00000561268 TNS2Q63HR2 1409 aa9.77□□□□□ -0.85
SPG11-224ENST00000561268 ZC3H6P61129 1189 aaKnown RBP9.77□□□□□ -0.85
SPG11-224ENST00000561268 NUTM2GQ5VZR2 741 aa9.77□□□□□ -0.85
SPG11-224ENST00000561268 THRAP3Q9Y2W1 955 aaKnown RBP9.77□□□□□ -0.85
SPG11-224ENST00000561268 PAPPAQ13219 1627 aa9.77□□□□□ -0.85
SPG11-224ENST00000561268 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
SPG11-224ENST00000561268 DOT1LQ8TEK3 1739 aa9.76□□□□□ -0.85
SPG11-224ENST00000561268 ARHGEF25Q86VW2 580 aa9.76□□□□□ -0.85
SPG11-224ENST00000561268 WDR17Q8IZU2 1322 aa9.76□□□□□ -0.85
SPG11-224ENST00000561268 LY75O60449 1722 aa9.76□□□□□ -0.85
SPG11-224ENST00000561268 PARD3Q8TEW0 1356 aa9.75□□□□□ -0.85
SPG11-224ENST00000561268 TUBGCP6Q96RT7 1819 aa9.75□□□□□ -0.85
SPG11-224ENST00000561268 OVOS2A0A0G2JMS6 1433 aa9.75□□□□□ -0.85
SPG11-224ENST00000561268 NLRP6P59044 892 aa9.75□□□□□ -0.85
SPG11-224ENST00000561268 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
SPG11-224ENST00000561268 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
SPG11-224ENST00000561268 COL24A1Q17RW2 1714 aa9.75□□□□□ -0.85
SPG11-224ENST00000561268 PLEKHG5O94827 1062 aa9.74□□□□□ -0.85
SPG11-224ENST00000561268 LARP1Q6PKG0 1096 aaKnown RBP9.74□□□□□ -0.85
SPG11-224ENST00000561268 TCP11L2Q8N4U5 519 aa9.74□□□□□ -0.85
SPG11-224ENST00000561268 KCNH5Q8NCM2 988 aa9.74□□□□□ -0.85
SPG11-224ENST00000561268 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
SPG11-224ENST00000561268 ERBB3P21860 1342 aa9.73□□□□□ -0.85
SPG11-224ENST00000561268 CCDC7Q96M83 1385 aa9.73□□□□□ -0.85
SPG11-224ENST00000561268 ST20-MTHFSA0A0A6YYL1 179 aa9.72□□□□□ -0.85
SPG11-224ENST00000561268 STRN4Q9NRL3 753 aa9.72□□□□□ -0.85
SPG11-224ENST00000561268 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
SPG11-224ENST00000561268 TOGARAM1Q9Y4F4 1720 aa9.72□□□□□ -0.85
SPG11-224ENST00000561268 ITGB4P16144 1822 aa9.72□□□□□ -0.85
SPG11-224ENST00000561268 VIRMAQ69YN4 1812 aaKnown RBP9.72□□□□□ -0.85
SPG11-224ENST00000561268 RTL1A6NKG5 1358 aa9.72□□□□□ -0.85
SPG11-224ENST00000561268 NCAPD2Q15021 1401 aa9.72□□□□□ -0.85
SPG11-224ENST00000561268 TAF1LQ8IZX4 1826 aa9.71□□□□□ -0.85
SPG11-224ENST00000561268 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
SPG11-224ENST00000561268 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
SPG11-224ENST00000561268 PRKAR2AP13861 404 aaKnown RBP9.71□□□□□ -0.86
SPG11-224ENST00000561268 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.86
SPG11-224ENST00000561268 DEFB132Q7Z7B7 95 aa9.71□□□□□ -0.86
SPG11-224ENST00000561268 KAT6BQ8WYB5 2073 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 ZBTB22O15209 634 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 BAG6P46379 1132 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 FAM196AQ6ZSG2 479 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 NME9Q86XW9 330 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 SLC12A5Q9H2X9 1139 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 TERF2IPQ9NYB0 399 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 CLEC11AQ9Y240 323 aa9.7□□□□□ -0.86
SPG11-224ENST00000561268 C11orf95C9JLR9 678 aaPredicted RBP9.69□□□□□ -0.86
SPG11-224ENST00000561268 HDGFL2Q7Z4V5 671 aaPredicted RBP9.69□□□□□ -0.86
SPG11-224ENST00000561268 CARD10Q9BWT7 1032 aa9.69□□□□□ -0.86
SPG11-224ENST00000561268 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
SPG11-224ENST00000561268 KIF24Q5T7B8 1368 aa9.68□□□□□ -0.86
SPG11-224ENST00000561268 A0A0G2JS52 829 aa9.68□□□□□ -0.86
SPG11-224ENST00000561268 MYT1Q01538 1121 aa9.68□□□□□ -0.86
SPG11-224ENST00000561268 CDCA7Q9BWT1 371 aaPredicted RBP9.68□□□□□ -0.86
SPG11-224ENST00000561268 SRCAPQ6ZRS2 3230 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms