RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 PPP2R1AP30153 589 aa16.56■□□□□ 0.24
USP8-209ENST00000560297 HOXC9P31274 260 aa16.56■□□□□ 0.24
USP8-209ENST00000560297 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
USP8-209ENST00000560297 FLT4P35916 1363 aa16.55■□□□□ 0.24
USP8-209ENST00000560297 ZNF772Q68DY9 489 aaPredicted RBP16.55■□□□□ 0.24
USP8-209ENST00000560297 UNC5CLQ8IV45 518 aa16.55■□□□□ 0.24
USP8-209ENST00000560297 USP21Q9UK80 565 aa16.55■□□□□ 0.24
USP8-209ENST00000560297 AFF2P51816 1311 aa16.54■□□□□ 0.24
USP8-209ENST00000560297 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
USP8-209ENST00000560297 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
USP8-209ENST00000560297 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
USP8-209ENST00000560297 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
USP8-209ENST00000560297 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
USP8-209ENST00000560297 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
USP8-209ENST00000560297 CFAP53Q96M91 514 aa16.53■□□□□ 0.24
USP8-209ENST00000560297 SLIT2O94813 1529 aa16.53■□□□□ 0.24
USP8-209ENST00000560297 INSRP06213 1382 aa16.52■□□□□ 0.24
USP8-209ENST00000560297 ABCC6O95255 1503 aa16.52■□□□□ 0.24
USP8-209ENST00000560297 CSB-PGBD3P0DP91 1061 aa16.51■□□□□ 0.23
USP8-209ENST00000560297 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
USP8-209ENST00000560297 STRN4Q9NRL3 753 aa16.51■□□□□ 0.23
USP8-209ENST00000560297 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
USP8-209ENST00000560297 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
USP8-209ENST00000560297 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
USP8-209ENST00000560297 BCL9LQ86UU0 1499 aa16.5■□□□□ 0.23
USP8-209ENST00000560297 VPS72Q15906 364 aa16.5■□□□□ 0.23
USP8-209ENST00000560297 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
USP8-209ENST00000560297 TRPC5Q9UL62 973 aaPredicted RBP16.5■□□□□ 0.23
USP8-209ENST00000560297 ERBB3P21860 1342 aa16.49■□□□□ 0.23
USP8-209ENST00000560297 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
USP8-209ENST00000560297 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
USP8-209ENST00000560297 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
USP8-209ENST00000560297 LARP1Q6PKG0 1096 aaKnown RBP16.48■□□□□ 0.23
USP8-209ENST00000560297 TOM1L2Q6ZVM7 507 aa16.48■□□□□ 0.23
USP8-209ENST00000560297 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
USP8-209ENST00000560297 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
USP8-209ENST00000560297 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
USP8-209ENST00000560297 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
USP8-209ENST00000560297 NLRP2Q9NX02 1062 aa16.47■□□□□ 0.23
USP8-209ENST00000560297 CCDC9Q9Y3X0 531 aaKnown RBP16.47■□□□□ 0.23
USP8-209ENST00000560297 COL5A2P05997 1499 aaPredicted RBP16.47■□□□□ 0.23
USP8-209ENST00000560297 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
USP8-209ENST00000560297 LMO7Q8WWI1 1683 aa16.46■□□□□ 0.23
USP8-209ENST00000560297 COL18A1P39060 1754 aa16.46■□□□□ 0.23
USP8-209ENST00000560297 RGS17Q9UGC6 210 aaPredicted RBP16.46■□□□□ 0.23
USP8-209ENST00000560297 NUDCQ9Y266 331 aa16.46■□□□□ 0.23
USP8-209ENST00000560297 IL13P35225 146 aa16.45■□□□□ 0.22
USP8-209ENST00000560297 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
USP8-209ENST00000560297 THRAP3Q9Y2W1 955 aaKnown RBP16.45■□□□□ 0.22
USP8-209ENST00000560297 CRB1P82279 1406 aa16.45■□□□□ 0.22
USP8-209ENST00000560297 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
USP8-209ENST00000560297 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
USP8-209ENST00000560297 LTN1O94822 1766 aa16.44■□□□□ 0.22
USP8-209ENST00000560297 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
USP8-209ENST00000560297 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
USP8-209ENST00000560297 SPATA31A1Q5TZJ5 1347 aa16.44■□□□□ 0.22
USP8-209ENST00000560297 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
USP8-209ENST00000560297 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
USP8-209ENST00000560297 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
USP8-209ENST00000560297 EYA1Q99502 592 aa16.43■□□□□ 0.22
USP8-209ENST00000560297 ATRNO75882 1429 aa16.43■□□□□ 0.22
USP8-209ENST00000560297 PEAK1Q9H792 1746 aa16.42■□□□□ 0.22
USP8-209ENST00000560297 RXRBP28702 533 aa16.42■□□□□ 0.22
USP8-209ENST00000560297 USP35Q9P2H5 1018 aa16.42■□□□□ 0.22
USP8-209ENST00000560297 PLCH1Q4KWH8 1693 aa16.41■□□□□ 0.22
USP8-209ENST00000560297 BARGINQ6ZT62 677 aa16.41■□□□□ 0.22
USP8-209ENST00000560297 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
USP8-209ENST00000560297 ONECUT3O60422 494 aaPredicted RBP16.4■□□□□ 0.22
USP8-209ENST00000560297 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
USP8-209ENST00000560297 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
USP8-209ENST00000560297 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
USP8-209ENST00000560297 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
USP8-209ENST00000560297 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.38■□□□□ 0.21
USP8-209ENST00000560297 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
USP8-209ENST00000560297 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
USP8-209ENST00000560297 IL2RBP14784 551 aa16.37■□□□□ 0.21
USP8-209ENST00000560297 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
USP8-209ENST00000560297 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
USP8-209ENST00000560297 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
USP8-209ENST00000560297 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
USP8-209ENST00000560297 MRS2Q9HD23 443 aa16.37■□□□□ 0.21
USP8-209ENST00000560297 NRAPQ86VF7 1730 aa16.36■□□□□ 0.21
USP8-209ENST00000560297 FCHSD2O94868 740 aa16.36■□□□□ 0.21
USP8-209ENST00000560297 MIER1Q8N108 512 aa16.36■□□□□ 0.21
USP8-209ENST00000560297 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
USP8-209ENST00000560297 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
USP8-209ENST00000560297 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
USP8-209ENST00000560297 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
USP8-209ENST00000560297 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
USP8-209ENST00000560297 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
USP8-209ENST00000560297 NCAPD2Q15021 1401 aa16.34■□□□□ 0.21
USP8-209ENST00000560297 EXOC5O00471 708 aa16.33■□□□□ 0.2
USP8-209ENST00000560297 HMOX1P09601 288 aa16.33■□□□□ 0.2
USP8-209ENST00000560297 SEPT12Q8IYM1 358 aa16.33■□□□□ 0.2
USP8-209ENST00000560297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.29e-10■■■■■ 43.9
USP8-209ENST00000560297 KDRP35968 1356 aa16.33■□□□□ 0.2
USP8-209ENST00000560297 FAM208AQ9UK61 1670 aaKnown RBP16.33■□□□□ 0.2
USP8-209ENST00000560297 A0A0G2JS52 829 aa16.32■□□□□ 0.2
USP8-209ENST00000560297 MYT1Q01538 1121 aa16.32■□□□□ 0.2
USP8-209ENST00000560297 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms