RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CHD2O14647 1828 aaKnown RBP10.36□□□□□ -0.75
SMAD3-212ENST00000559937 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
SMAD3-212ENST00000559937 IL13P35225 146 aa10.36□□□□□ -0.75
SMAD3-212ENST00000559937 EXOSC9Q06265 439 aaKnown RBP10.36□□□□□ -0.75
SMAD3-212ENST00000559937 NME9Q86XW9 330 aa10.36□□□□□ -0.75
SMAD3-212ENST00000559937 DZIP1LQ8IYY4 767 aaKnown RBP10.36□□□□□ -0.75
SMAD3-212ENST00000559937 TTC21AQ8NDW8 1320 aa10.35□□□□□ -0.75
SMAD3-212ENST00000559937 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
SMAD3-212ENST00000559937 LTKP29376 864 aa10.35□□□□□ -0.75
SMAD3-212ENST00000559937 RWDD1Q9H446 243 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-212ENST00000559937 USP31Q70CQ4 1352 aa10.35□□□□□ -0.75
SMAD3-212ENST00000559937 TTC21BQ7Z4L5 1316 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 MARF1Q9Y4F3 1742 aaKnown RBP10.34□□□□□ -0.75
SMAD3-212ENST00000559937 IGHDP01880 384 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 RLBP1P12271 317 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 GNAI1P63096 354 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 C8orf34Q49A92 452 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 THEMISQ8N1K5 641 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-212ENST00000559937 TSR2Q969E8 191 aaKnown RBP10.34□□□□□ -0.75
SMAD3-212ENST00000559937 SMC4Q9NTJ3 1288 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 DDX19BQ9UMR2 479 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 EMILIN1Q9Y6C2 1016 aa10.34□□□□□ -0.75
SMAD3-212ENST00000559937 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-212ENST00000559937 ATF7IPQ6VMQ6 1270 aa10.33□□□□□ -0.76
SMAD3-212ENST00000559937 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
SMAD3-212ENST00000559937 CERKQ8TCT0 537 aa10.33□□□□□ -0.76
SMAD3-212ENST00000559937 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
SMAD3-212ENST00000559937 CHMP4BQ9H444 224 aaKnown RBP10.33□□□□□ -0.76
SMAD3-212ENST00000559937 PIK3C2AO00443 1686 aa10.33□□□□□ -0.76
SMAD3-212ENST00000559937 ACEP12821 1306 aa10.33□□□□□ -0.76
SMAD3-212ENST00000559937 ZNF853P0CG23 659 aa10.32□□□□□ -0.76
SMAD3-212ENST00000559937 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-212ENST00000559937 TRIM27P14373 513 aa10.31□□□□□ -0.76
SMAD3-212ENST00000559937 RGS3P49796 1198 aa10.31□□□□□ -0.76
SMAD3-212ENST00000559937 NPM2Q86SE8 214 aaKnown RBP10.31□□□□□ -0.76
SMAD3-212ENST00000559937 ARHGAP45Q92619 1136 aa10.31□□□□□ -0.76
SMAD3-212ENST00000559937 BCL2L13Q9BXK5 485 aa10.31□□□□□ -0.76
SMAD3-212ENST00000559937 PCDHB15Q9Y5E8 787 aa10.31□□□□□ -0.76
SMAD3-212ENST00000559937 CACNA1FO60840 1977 aa10.31□□□□□ -0.76
SMAD3-212ENST00000559937 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
SMAD3-212ENST00000559937 ARHGEF10O15013 1369 aa10.3□□□□□ -0.76
SMAD3-212ENST00000559937 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
SMAD3-212ENST00000559937 HDAC1Q13547 482 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-212ENST00000559937 SKAP1Q86WV1 359 aa10.3□□□□□ -0.76
SMAD3-212ENST00000559937 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
SMAD3-212ENST00000559937 TNNQ9UQP3 1299 aa10.3□□□□□ -0.76
SMAD3-212ENST00000559937 AMOTL2Q9Y2J4 779 aa10.3□□□□□ -0.76
SMAD3-212ENST00000559937 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
SMAD3-212ENST00000559937 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
SMAD3-212ENST00000559937 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
SMAD3-212ENST00000559937 HMOX1P09601 288 aa10.29□□□□□ -0.76
SMAD3-212ENST00000559937 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-212ENST00000559937 PHACTR3Q96KR7 559 aa10.29□□□□□ -0.76
SMAD3-212ENST00000559937 VAMP4O75379 141 aa10.28□□□□□ -0.76
SMAD3-212ENST00000559937 CFAP44Q96MT7 982 aa10.28□□□□□ -0.76
SMAD3-212ENST00000559937 NOB1Q9ULX3 412 aaKnown RBP10.28□□□□□ -0.76
SMAD3-212ENST00000559937 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
SMAD3-212ENST00000559937 FLT4P35916 1363 aa10.27□□□□□ -0.76
SMAD3-212ENST00000559937 N4BP2Q86UW6 1770 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-212ENST00000559937 PHRF1Q9P1Y6 1649 aaKnown RBP10.27□□□□□ -0.77
SMAD3-212ENST00000559937 FBLN1P23142 703 aa10.27□□□□□ -0.77
SMAD3-212ENST00000559937 EIF4A2Q14240 407 aaKnown RBP10.27□□□□□ -0.77
SMAD3-212ENST00000559937 RRS1Q15050 365 aaKnown RBP10.27□□□□□ -0.77
SMAD3-212ENST00000559937 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.77
SMAD3-212ENST00000559937 SLC26A8Q96RN1 970 aa10.27□□□□□ -0.77
SMAD3-212ENST00000559937 KIAA0232Q92628 1395 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 LTN1O94822 1766 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 ITPRIPQ8IWB1 547 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 SMC5Q8IY18 1101 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 MBIPQ9NS73 344 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 ZBTB40Q9NUA8 1239 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 KDRP35968 1356 aa10.26□□□□□ -0.77
SMAD3-212ENST00000559937 TMEM57Q8N5G2 664 aa10.25□□□□□ -0.77
SMAD3-212ENST00000559937 API5Q9BZZ5 524 aaKnown RBP10.25□□□□□ -0.77
SMAD3-212ENST00000559937 ABCC4O15439 1325 aa10.25□□□□□ -0.77
SMAD3-212ENST00000559937 NWD1Q149M9 1564 aa10.24□□□□□ -0.77
SMAD3-212ENST00000559937 TWISTNBQ3B726 338 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-212ENST00000559937 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-212ENST00000559937 FAM208AQ9UK61 1670 aaKnown RBP10.24□□□□□ -0.77
SMAD3-212ENST00000559937 RTL1A6NKG5 1358 aa10.24□□□□□ -0.77
SMAD3-212ENST00000559937 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-212ENST00000559937 SULT6B1Q6IMI4 303 aa10.23□□□□□ -0.77
SMAD3-212ENST00000559937 NGDNQ8NEJ9 315 aaKnown RBP10.23□□□□□ -0.77
SMAD3-212ENST00000559937 LAS1LQ9Y4W2 734 aaKnown RBP10.23□□□□□ -0.77
SMAD3-212ENST00000559937 USP19O94966 1318 aa10.23□□□□□ -0.77
SMAD3-212ENST00000559937 MAP3K19Q56UN5 1328 aa10.23□□□□□ -0.77
SMAD3-212ENST00000559937 IGSF1Q8N6C5 1336 aa10.23□□□□□ -0.77
SMAD3-212ENST00000559937 CHL1O00533 1208 aa10.22□□□□□ -0.77
SMAD3-212ENST00000559937 HTATSF1O43719 755 aaKnown RBP10.22□□□□□ -0.77
SMAD3-212ENST00000559937 THUMPD2Q9BTF0 503 aaKnown RBP10.22□□□□□ -0.77
SMAD3-212ENST00000559937 UPF2Q9HAU5 1272 aaKnown RBP10.22□□□□□ -0.77
SMAD3-212ENST00000559937 CRB1P82279 1406 aa10.22□□□□□ -0.77
SMAD3-212ENST00000559937 ADGRL3Q9HAR2 1447 aa10.22□□□□□ -0.77
SMAD3-212ENST00000559937 LTBP4Q8N2S1 1624 aa10.22□□□□□ -0.77
SMAD3-212ENST00000559937 TSPYL6Q8N831 410 aa10.21□□□□□ -0.77
SMAD3-212ENST00000559937 GCC1Q96CN9 775 aa10.21□□□□□ -0.77
SMAD3-212ENST00000559937 KIF1AQ12756 1690 aa10.21□□□□□ -0.78
SMAD3-212ENST00000559937 ZBTB7BO15156 539 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms