RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 FANCD2Q9BXW9 1451 aa8.67□□□□□ -1.02
ZEB1-215ENST00000559476 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
ZEB1-215ENST00000559476 BMP1P13497 986 aa8.66□□□□□ -1.02
ZEB1-215ENST00000559476 WDR4P57081 412 aaKnown RBP8.66□□□□□ -1.02
ZEB1-215ENST00000559476 SCARF1Q14162 830 aa8.66□□□□□ -1.02
ZEB1-215ENST00000559476 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
ZEB1-215ENST00000559476 DNMBPQ6XZF7 1577 aa8.65□□□□□ -1.02
ZEB1-215ENST00000559476 CUX1P39880 1505 aa8.65□□□□□ -1.02
ZEB1-215ENST00000559476 TIMP2P16035 220 aa8.65□□□□□ -1.02
ZEB1-215ENST00000559476 RTL5Q5HYW3 569 aaPredicted RBP8.65□□□□□ -1.02
ZEB1-215ENST00000559476 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
ZEB1-215ENST00000559476 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
ZEB1-215ENST00000559476 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
ZEB1-215ENST00000559476 ARID5BQ14865 1188 aa8.64□□□□□ -1.03
ZEB1-215ENST00000559476 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
ZEB1-215ENST00000559476 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
ZEB1-215ENST00000559476 C1QTNF2Q9BXJ5 285 aa8.64□□□□□ -1.03
ZEB1-215ENST00000559476 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
ZEB1-215ENST00000559476 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
ZEB1-215ENST00000559476 MAP4K5Q9Y4K4 846 aa8.64□□□□□ -1.03
ZEB1-215ENST00000559476 TRMT44Q8IYL2 757 aaKnown RBP8.63□□□□□ -1.03
ZEB1-215ENST00000559476 ZFP42Q96MM3 310 aa8.63□□□□□ -1.03
ZEB1-215ENST00000559476 EEA1Q15075 1411 aa8.63□□□□□ -1.03
ZEB1-215ENST00000559476 PDS5BQ9NTI5 1447 aa8.63□□□□□ -1.03
ZEB1-215ENST00000559476 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
ZEB1-215ENST00000559476 SH3BP5LQ7L8J4 393 aa8.62□□□□□ -1.03
ZEB1-215ENST00000559476 FAM117AQ9C073 453 aa8.62□□□□□ -1.03
ZEB1-215ENST00000559476 STK17AQ9UEE5 414 aa8.62□□□□□ -1.03
ZEB1-215ENST00000559476 GRM5P41594 1212 aa8.61□□□□□ -1.03
ZEB1-215ENST00000559476 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
ZEB1-215ENST00000559476 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
ZEB1-215ENST00000559476 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
ZEB1-215ENST00000559476 IRF7Q92985 503 aa8.6□□□□□ -1.03
ZEB1-215ENST00000559476 WDR97A6NE52 1622 aa8.6□□□□□ -1.03
ZEB1-215ENST00000559476 UPP2O95045 317 aa8.59□□□□□ -1.03
ZEB1-215ENST00000559476 PPP2R2DQ66LE6 453 aa8.59□□□□□ -1.03
ZEB1-215ENST00000559476 PDXDC2PQ6P474 469 aa8.59□□□□□ -1.03
ZEB1-215ENST00000559476 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
ZEB1-215ENST00000559476 CTDSPL2Q05D32 466 aa8.58□□□□□ -1.04
ZEB1-215ENST00000559476 VASH1Q7L8A9 365 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-215ENST00000559476 ITPKCQ96DU7 683 aa8.58□□□□□ -1.04
ZEB1-215ENST00000559476 PURBQ96QR8 312 aaKnown RBP8.58□□□□□ -1.04
ZEB1-215ENST00000559476 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
ZEB1-215ENST00000559476 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
ZEB1-215ENST00000559476 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
ZEB1-215ENST00000559476 KIF21BO75037 1637 aa8.58□□□□□ -1.04
ZEB1-215ENST00000559476 FGD5Q6ZNL6 1462 aa8.57□□□□□ -1.04
ZEB1-215ENST00000559476 MAGEB6P1A0A0J9YX57 407 aa8.57□□□□□ -1.04
ZEB1-215ENST00000559476 NR3C2P08235 984 aa8.57□□□□□ -1.04
ZEB1-215ENST00000559476 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
ZEB1-215ENST00000559476 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
ZEB1-215ENST00000559476 EMILIN1Q9Y6C2 1016 aa8.57□□□□□ -1.04
ZEB1-215ENST00000559476 H3BM21 787 aa8.56□□□□□ -1.04
ZEB1-215ENST00000559476 FSHRP23945 695 aa8.56□□□□□ -1.04
ZEB1-215ENST00000559476 ZFAND3Q9H8U3 227 aa8.56□□□□□ -1.04
ZEB1-215ENST00000559476 FKBPLQ9UIM3 349 aa8.56□□□□□ -1.04
ZEB1-215ENST00000559476 SOGA1O94964 1423 aa8.55□□□□□ -1.04
ZEB1-215ENST00000559476 URB2Q14146 1524 aaKnown RBP8.55□□□□□ -1.04
ZEB1-215ENST00000559476 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
ZEB1-215ENST00000559476 CCDC116Q8IYX3 515 aa8.55□□□□□ -1.04
ZEB1-215ENST00000559476 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
ZEB1-215ENST00000559476 PCMTD1Q96MG8 357 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-215ENST00000559476 GPSM3Q9Y4H4 160 aa8.55□□□□□ -1.04
ZEB1-215ENST00000559476 THOC2Q8NI27 1593 aaKnown RBP8.54□□□□□ -1.04
ZEB1-215ENST00000559476 MRC2Q9UBG0 1479 aa8.54□□□□□ -1.04
ZEB1-215ENST00000559476 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
ZEB1-215ENST00000559476 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
ZEB1-215ENST00000559476 FAM9AQ8IZU1 332 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-215ENST00000559476 PROCA1Q8NCQ7 364 aaPredicted RBP8.54□□□□□ -1.04
ZEB1-215ENST00000559476 ARHGAP9Q9BRR9 750 aa8.54□□□□□ -1.04
ZEB1-215ENST00000559476 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
ZEB1-215ENST00000559476 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
ZEB1-215ENST00000559476 CARD14Q9BXL6 1004 aa8.53□□□□□ -1.04
ZEB1-215ENST00000559476 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
ZEB1-215ENST00000559476 RUSC2Q8N2Y8 1516 aa8.53□□□□□ -1.04
ZEB1-215ENST00000559476 PBRM1Q86U86 1689 aa8.53□□□□□ -1.04
ZEB1-215ENST00000559476 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
ZEB1-215ENST00000559476 ERCC6Q03468 1493 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 MAN1A2O60476 641 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 AP1G2O75843 785 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 BMP2P12643 396 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 PTK2Q05397 1052 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
ZEB1-215ENST00000559476 LRRN4Q8WUT4 740 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 SLC10A4Q96EP9 437 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 WDR62O43379 1518 aa8.52□□□□□ -1.05
ZEB1-215ENST00000559476 CUL7Q14999 1698 aa8.51□□□□□ -1.05
ZEB1-215ENST00000559476 GMPRP36959 345 aa8.51□□□□□ -1.05
ZEB1-215ENST00000559476 C6orf118Q5T5N4 469 aa8.51□□□□□ -1.05
ZEB1-215ENST00000559476 ZBTB33Q86T24 672 aa8.51□□□□□ -1.05
ZEB1-215ENST00000559476 KIF27Q86VH2 1401 aa8.51□□□□□ -1.05
ZEB1-215ENST00000559476 TARBP1Q13395 1621 aaKnown RBP8.51□□□□□ -1.05
ZEB1-215ENST00000559476 ABCA5Q8WWZ7 1642 aa8.51□□□□□ -1.05
ZEB1-215ENST00000559476 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
ZEB1-215ENST00000559476 ABCA10Q8WWZ4 1543 aa8.5□□□□□ -1.05
ZEB1-215ENST00000559476 TMEM259Q4ZIN3 620 aa8.5□□□□□ -1.05
ZEB1-215ENST00000559476 GOLGA3Q08378 1498 aa8.5□□□□□ -1.05
ZEB1-215ENST00000559476 VSIG8P0DPA2 414 aa8.49□□□□□ -1.05
ZEB1-215ENST00000559476 NR6A1Q15406 480 aa8.49□□□□□ -1.05
ZEB1-215ENST00000559476 CUX2O14529 1486 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms