RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ANKRD36BQ8N2N9 1353 aa11.41□□□□□ -0.58
SNX1-207ENST00000559401 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
SNX1-207ENST00000559401 SF3B2Q13435 895 aaKnown RBP11.41□□□□□ -0.58
SNX1-207ENST00000559401 TOM1L2Q6ZVM7 507 aa11.41□□□□□ -0.58
SNX1-207ENST00000559401 CRB1P82279 1406 aa11.41□□□□□ -0.58
SNX1-207ENST00000559401 WNK3Q9BYP7 1800 aa11.4□□□□□ -0.58
SNX1-207ENST00000559401 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNX1-207ENST00000559401 FAM182BQ5T319 152 aa11.4□□□□□ -0.58
SNX1-207ENST00000559401 ARHGEF25Q86VW2 580 aa11.4□□□□□ -0.58
SNX1-207ENST00000559401 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.58
SNX1-207ENST00000559401 BLMP54132 1417 aaPredicted RBP11.4□□□□□ -0.58
SNX1-207ENST00000559401 OVOS2A0A0J9YW53 1432 aa11.39□□□□□ -0.59
SNX1-207ENST00000559401 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
SNX1-207ENST00000559401 OVOS2Q6IE36 1432 aa11.39□□□□□ -0.59
SNX1-207ENST00000559401 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
SNX1-207ENST00000559401 COG3Q96JB2 828 aa11.39□□□□□ -0.59
SNX1-207ENST00000559401 AXIN2Q9Y2T1 843 aa11.39□□□□□ -0.59
SNX1-207ENST00000559401 ABCC6O95255 1503 aa11.39□□□□□ -0.59
SNX1-207ENST00000559401 WDR17Q8IZU2 1322 aa11.38□□□□□ -0.59
SNX1-207ENST00000559401 PARP4Q9UKK3 1724 aaKnown RBP11.38□□□□□ -0.59
SNX1-207ENST00000559401 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
SNX1-207ENST00000559401 PDE3BQ13370 1112 aa11.38□□□□□ -0.59
SNX1-207ENST00000559401 BARGINQ6ZT62 677 aa11.38□□□□□ -0.59
SNX1-207ENST00000559401 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
SNX1-207ENST00000559401 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
SNX1-207ENST00000559401 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
SNX1-207ENST00000559401 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
SNX1-207ENST00000559401 DEFB132Q7Z7B7 95 aa11.35□□□□□ -0.59
SNX1-207ENST00000559401 TNS1Q9HBL0 1735 aaKnown RBP11.35□□□□□ -0.59
SNX1-207ENST00000559401 FAM208AQ9UK61 1670 aaKnown RBP11.34□□□□□ -0.59
SNX1-207ENST00000559401 BAG6P46379 1132 aa11.34□□□□□ -0.59
SNX1-207ENST00000559401 ANKRD24Q8TF21 1146 aa11.34□□□□□ -0.59
SNX1-207ENST00000559401 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
SNX1-207ENST00000559401 ERBB3P21860 1342 aa11.34□□□□□ -0.59
SNX1-207ENST00000559401 CCDC7Q96M83 1385 aa11.33□□□□□ -0.6
SNX1-207ENST00000559401 FYB1O15117 783 aa11.33□□□□□ -0.6
SNX1-207ENST00000559401 AMPHP49418 695 aa11.33□□□□□ -0.6
SNX1-207ENST00000559401 DDB1Q16531 1140 aa11.33□□□□□ -0.6
SNX1-207ENST00000559401 FAM196AQ6ZSG2 479 aa11.33□□□□□ -0.6
SNX1-207ENST00000559401 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
SNX1-207ENST00000559401 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
SNX1-207ENST00000559401 TRIM37O94972 964 aa11.32□□□□□ -0.6
SNX1-207ENST00000559401 FBLN1P23142 703 aa11.32□□□□□ -0.6
SNX1-207ENST00000559401 OVOS2A0A0G2JMS6 1433 aa11.32□□□□□ -0.6
SNX1-207ENST00000559401 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
SNX1-207ENST00000559401 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
SNX1-207ENST00000559401 IP6K1Q92551 441 aa11.31□□□□□ -0.6
SNX1-207ENST00000559401 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
SNX1-207ENST00000559401 CARD14Q9BXL6 1004 aa11.31□□□□□ -0.6
SNX1-207ENST00000559401 ANKRD26Q9UPS8 1709 aa11.31□□□□□ -0.6
SNX1-207ENST00000559401 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
SNX1-207ENST00000559401 EP400Q96L91 3159 aa11.3□□□□□ -0.6
SNX1-207ENST00000559401 HOXC9P31274 260 aa11.3□□□□□ -0.6
SNX1-207ENST00000559401 CGNL1Q0VF96 1302 aa11.3□□□□□ -0.6
SNX1-207ENST00000559401 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
SNX1-207ENST00000559401 PEAK1Q9H792 1746 aa11.29□□□□□ -0.6
SNX1-207ENST00000559401 DISP2A7MBM2 1401 aa11.29□□□□□ -0.6
SNX1-207ENST00000559401 SMG6Q86US8 1419 aaKnown RBP11.29□□□□□ -0.6
SNX1-207ENST00000559401 EXOC5O00471 708 aa11.29□□□□□ -0.6
SNX1-207ENST00000559401 APBA3O96018 575 aa11.29□□□□□ -0.6
SNX1-207ENST00000559401 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
SNX1-207ENST00000559401 SBF2Q86WG5 1849 aa11.29□□□□□ -0.6
SNX1-207ENST00000559401 TNS2Q63HR2 1409 aa11.28□□□□□ -0.6
SNX1-207ENST00000559401 IL2RBP14784 551 aa11.28□□□□□ -0.6
SNX1-207ENST00000559401 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
SNX1-207ENST00000559401 PPM1GO15355 546 aaPredicted RBP11.27□□□□□ -0.61
SNX1-207ENST00000559401 PANK3Q9H999 370 aa11.27□□□□□ -0.61
SNX1-207ENST00000559401 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
SNX1-207ENST00000559401 FLT4P35916 1363 aa11.27□□□□□ -0.61
SNX1-207ENST00000559401 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
SNX1-207ENST00000559401 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
SNX1-207ENST00000559401 MARCH10Q8NA82 808 aaPredicted RBP11.26□□□□□ -0.61
SNX1-207ENST00000559401 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
SNX1-207ENST00000559401 KIF7Q2M1P5 1343 aa11.25□□□□□ -0.61
SNX1-207ENST00000559401 RREB1Q92766 1687 aa11.24□□□□□ -0.61
SNX1-207ENST00000559401 HSP90AB2PQ58FF8 381 aa11.24□□□□□ -0.61
SNX1-207ENST00000559401 USHBP1Q8N6Y0 703 aa11.24□□□□□ -0.61
SNX1-207ENST00000559401 INSRP06213 1382 aa11.24□□□□□ -0.61
SNX1-207ENST00000559401 KAT6BQ8WYB5 2073 aa11.24□□□□□ -0.61
SNX1-207ENST00000559401 NUP188Q5SRE5 1749 aa11.23□□□□□ -0.61
SNX1-207ENST00000559401 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
SNX1-207ENST00000559401 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
SNX1-207ENST00000559401 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
SNX1-207ENST00000559401 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
SNX1-207ENST00000559401 PARD3Q8TEW0 1356 aa11.23□□□□□ -0.61
SNX1-207ENST00000559401 NHSQ6T4R5 1651 aa11.23□□□□□ -0.61
SNX1-207ENST00000559401 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
SNX1-207ENST00000559401 MEGF6O75095 1541 aa11.22□□□□□ -0.61
SNX1-207ENST00000559401 NSD2O96028 1365 aa11.22□□□□□ -0.61
SNX1-207ENST00000559401 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
SNX1-207ENST00000559401 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
SNX1-207ENST00000559401 ACSBG1Q96GR2 724 aa11.22□□□□□ -0.61
SNX1-207ENST00000559401 CAMKK2Q96RR4 588 aa11.22□□□□□ -0.61
SNX1-207ENST00000559401 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.61
SNX1-207ENST00000559401 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.61
SNX1-207ENST00000559401 NBPF6Q5VWK0 638 aa11.21□□□□□ -0.61
SNX1-207ENST00000559401 MORC1Q86VD1 984 aa11.21□□□□□ -0.61
SNX1-207ENST00000559401 NBPF4Q96M43 638 aa11.21□□□□□ -0.61
SNX1-207ENST00000559401 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
SNX1-207ENST00000559401 BCL9O00512 1426 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms