RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
TPM1-219ENST00000559397 ABCC6O95255 1503 aa22.21■■□□□ 1.15
TPM1-219ENST00000559397 LMO7Q8WWI1 1683 aa22.21■■□□□ 1.15
TPM1-219ENST00000559397 CDK12Q9NYV4 1490 aaPredicted RBP22.21■■□□□ 1.15
TPM1-219ENST00000559397 FLT4P35916 1363 aa22.21■■□□□ 1.15
TPM1-219ENST00000559397 ZBTB7CA1YPR0 619 aa22.2■■□□□ 1.15
TPM1-219ENST00000559397 HOXC9P31274 260 aa22.2■■□□□ 1.15
TPM1-219ENST00000559397 AMPHP49418 695 aa22.2■■□□□ 1.15
TPM1-219ENST00000559397 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
TPM1-219ENST00000559397 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
TPM1-219ENST00000559397 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
TPM1-219ENST00000559397 INSRP06213 1382 aa22.19■■□□□ 1.14
TPM1-219ENST00000559397 ILDR1Q86SU0 546 aaPredicted RBP22.19■■□□□ 1.14
TPM1-219ENST00000559397 AXIN2Q9Y2T1 843 aa22.19■■□□□ 1.14
TPM1-219ENST00000559397 RGPD5Q99666 1765 aa22.19■■□□□ 1.14
TPM1-219ENST00000559397 HSP90AB2PQ58FF8 381 aa22.18■■□□□ 1.14
TPM1-219ENST00000559397 COL3A1P02461 1466 aaPredicted RBP22.17■■□□□ 1.14
TPM1-219ENST00000559397 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
TPM1-219ENST00000559397 CAMTA1Q9Y6Y1 1673 aa22.16■■□□□ 1.14
TPM1-219ENST00000559397 BLMP54132 1417 aaPredicted RBP22.16■■□□□ 1.14
TPM1-219ENST00000559397 PLCH1Q4KWH8 1693 aa22.15■■□□□ 1.14
TPM1-219ENST00000559397 SLIT2O94813 1529 aa22.13■■□□□ 1.13
TPM1-219ENST00000559397 CFAP53Q96M91 514 aa22.13■■□□□ 1.13
TPM1-219ENST00000559397 C8orf37Q96NL8 207 aa22.13■■□□□ 1.13
TPM1-219ENST00000559397 BTG4Q9NY30 223 aa22.12■■□□□ 1.13
TPM1-219ENST00000559397 NWD2Q9ULI1 1742 aa22.12■■□□□ 1.13
TPM1-219ENST00000559397 COL5A2P05997 1499 aaPredicted RBP22.11■■□□□ 1.13
TPM1-219ENST00000559397 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
TPM1-219ENST00000559397 EIF4A2Q14240 407 aaKnown RBP22.11■■□□□ 1.13
TPM1-219ENST00000559397 MEX3CQ5U5Q3 659 aaKnown RBP22.11■■□□□ 1.13
TPM1-219ENST00000559397 NRAPQ86VF7 1730 aa22.11■■□□□ 1.13
TPM1-219ENST00000559397 IL13P35225 146 aa22.11■■□□□ 1.13
TPM1-219ENST00000559397 FNBP4Q8N3X1 1017 aaPredicted RBP22.11■■□□□ 1.13
TPM1-219ENST00000559397 ANKRD24Q8TF21 1146 aa22.11■■□□□ 1.13
TPM1-219ENST00000559397 ERBB3P21860 1342 aa22.1■■□□□ 1.13
TPM1-219ENST00000559397 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
TPM1-219ENST00000559397 NGLY1Q96IV0 654 aa22.1■■□□□ 1.13
TPM1-219ENST00000559397 LTV1Q96GA3 475 aaPredicted RBP22.08■■□□□ 1.13
TPM1-219ENST00000559397 BCL9LQ86UU0 1499 aa22.07■■□□□ 1.12
TPM1-219ENST00000559397 RGPD1P0DJD0 1748 aa22.06■■□□□ 1.12
TPM1-219ENST00000559397 RGPD2P0DJD1 1756 aa22.06■■□□□ 1.12
TPM1-219ENST00000559397 WDR17Q8IZU2 1322 aa22.05■■□□□ 1.12
TPM1-219ENST00000559397 FAM208AQ9UK61 1670 aaKnown RBP22.05■■□□□ 1.12
TPM1-219ENST00000559397 EVA1CP58658 441 aa22.04■■□□□ 1.12
TPM1-219ENST00000559397 STRN4Q9NRL3 753 aa22.04■■□□□ 1.12
TPM1-219ENST00000559397 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.04■■□□□ 1.12
TPM1-219ENST00000559397 LARP1Q6PKG0 1096 aaKnown RBP22.04■■□□□ 1.12
TPM1-219ENST00000559397 UNC5CLQ8IV45 518 aa22.04■■□□□ 1.12
TPM1-219ENST00000559397 AFF2P51816 1311 aa22.03■■□□□ 1.12
TPM1-219ENST00000559397 EYA1Q99502 592 aa22.03■■□□□ 1.12
TPM1-219ENST00000559397 USP21Q9UK80 565 aa22.03■■□□□ 1.12
TPM1-219ENST00000559397 ZBED9Q6R2W3 1325 aa22.03■■□□□ 1.12
TPM1-219ENST00000559397 CSB-PGBD3P0DP91 1061 aa22.02■■□□□ 1.12
TPM1-219ENST00000559397 NBPF6Q5VWK0 638 aa22.02■■□□□ 1.12
TPM1-219ENST00000559397 NBPF4Q96M43 638 aa22.02■■□□□ 1.12
TPM1-219ENST00000559397 NUDCQ9Y266 331 aa22.02■■□□□ 1.12
TPM1-219ENST00000559397 IGSF1Q8N6C5 1336 aa22.02■■□□□ 1.12
TPM1-219ENST00000559397 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
TPM1-219ENST00000559397 U2SURPO15042 1029 aaKnown RBP22■■□□□ 1.11
TPM1-219ENST00000559397 CRB1P82279 1406 aa22■■□□□ 1.11
TPM1-219ENST00000559397 TOM1L2Q6ZVM7 507 aa21.99■■□□□ 1.11
TPM1-219ENST00000559397 CARD10Q9BWT7 1032 aa21.99■■□□□ 1.11
TPM1-219ENST00000559397 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
TPM1-219ENST00000559397 VPS72Q15906 364 aa21.98■■□□□ 1.11
TPM1-219ENST00000559397 U2AF1L5P0DN76 240 aaPredicted RBP21.97■■□□□ 1.11
TPM1-219ENST00000559397 U2AF1Q01081 240 aaKnown RBP eCLIP21.97■■□□□ 1.116e-9■■■■□ 21.7
TPM1-219ENST00000559397 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
TPM1-219ENST00000559397 KDRP35968 1356 aa21.97■■□□□ 1.11
TPM1-219ENST00000559397 WDR43Q15061 677 aaKnown RBP eCLIP21.96■■□□□ 1.11
TPM1-219ENST00000559397 SULT6B1Q6IMI4 303 aa21.96■■□□□ 1.11
TPM1-219ENST00000559397 AEBP1Q8IUX7 1158 aa21.96■■□□□ 1.11
TPM1-219ENST00000559397 SPATA31A5Q5VU36 1347 aa21.96■■□□□ 1.11
TPM1-219ENST00000559397 SPATA31A7Q8IWB4 1347 aa21.96■■□□□ 1.11
TPM1-219ENST00000559397 ATRNO75882 1429 aa21.96■■□□□ 1.11
TPM1-219ENST00000559397 ADAMTS8Q9UP79 889 aa21.95■■□□□ 1.1
TPM1-219ENST00000559397 SPATA31A1Q5TZJ5 1347 aa21.95■■□□□ 1.1
TPM1-219ENST00000559397 HMOX1P09601 288 aa21.95■■□□□ 1.1
TPM1-219ENST00000559397 TRPC5Q9UL62 973 aaPredicted RBP21.94■■□□□ 1.1
TPM1-219ENST00000559397 RSPH6AQ9H0K4 717 aa21.93■■□□□ 1.1
TPM1-219ENST00000559397 ZNF772Q68DY9 489 aaPredicted RBP21.92■■□□□ 1.1
TPM1-219ENST00000559397 RGS17Q9UGC6 210 aaPredicted RBP21.92■■□□□ 1.1
TPM1-219ENST00000559397 FCHSD2O94868 740 aa21.91■■□□□ 1.1
TPM1-219ENST00000559397 USP35Q9P2H5 1018 aa21.91■■□□□ 1.1
TPM1-219ENST00000559397 GTF3C3Q9Y5Q9 886 aa21.91■■□□□ 1.1
TPM1-219ENST00000559397 QTRT2Q9H974 415 aaKnown RBP21.91■■□□□ 1.1
TPM1-219ENST00000559397 THRAP3Q9Y2W1 955 aaKnown RBP21.91■■□□□ 1.1
TPM1-219ENST00000559397 CCDC9Q9Y3X0 531 aaKnown RBP21.91■■□□□ 1.1
TPM1-219ENST00000559397 GLI3P10071 1580 aa21.9■■□□□ 1.1
TPM1-219ENST00000559397 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
TPM1-219ENST00000559397 GJD4Q96KN9 370 aaPredicted RBP21.9■■□□□ 1.1
TPM1-219ENST00000559397 WNK3Q9BYP7 1800 aa21.89■■□□□ 1.1
TPM1-219ENST00000559397 PLEKHF1Q96S99 279 aa21.89■■□□□ 1.1
TPM1-219ENST00000559397 DISP2A7MBM2 1401 aa21.88■■□□□ 1.09
TPM1-219ENST00000559397 MEGF6O75095 1541 aa21.88■■□□□ 1.09
TPM1-219ENST00000559397 PRKAR2BP31323 418 aa21.88■■□□□ 1.09
TPM1-219ENST00000559397 BARGINQ6ZT62 677 aa21.88■■□□□ 1.09
TPM1-219ENST00000559397 IL2RBP14784 551 aa21.85■■□□□ 1.09
TPM1-219ENST00000559397 RAPGEF4Q8WZA2 1011 aa21.85■■□□□ 1.09
TPM1-219ENST00000559397 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
TPM1-219ENST00000559397 PNNQ9H307 717 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms