RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 FAM98CQ17RN3 349 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-207ENST00000558936 SEPT12Q8IYM1 358 aa17.68■□□□□ 0.42
RABGGTA-207ENST00000558936 PEAK1Q9H792 1746 aa17.68■□□□□ 0.42
RABGGTA-207ENST00000558936 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
RABGGTA-207ENST00000558936 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
RABGGTA-207ENST00000558936 KIF7Q2M1P5 1343 aa17.67■□□□□ 0.42
RABGGTA-207ENST00000558936 NSD3Q9BZ95 1437 aa17.66■□□□□ 0.42
RABGGTA-207ENST00000558936 WNK3Q9BYP7 1800 aa17.66■□□□□ 0.42
RABGGTA-207ENST00000558936 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
RABGGTA-207ENST00000558936 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
RABGGTA-207ENST00000558936 KCNH5Q8NCM2 988 aa17.64■□□□□ 0.41
RABGGTA-207ENST00000558936 CCDC9Q9Y3X0 531 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-207ENST00000558936 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
RABGGTA-207ENST00000558936 PANK3Q9H999 370 aa17.62■□□□□ 0.41
RABGGTA-207ENST00000558936 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
RABGGTA-207ENST00000558936 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
RABGGTA-207ENST00000558936 ABCC6O95255 1503 aa17.62■□□□□ 0.41
RABGGTA-207ENST00000558936 PARP4Q9UKK3 1724 aaKnown RBP17.61■□□□□ 0.41
RABGGTA-207ENST00000558936 POLR3GLQ9BT43 218 aa17.61■□□□□ 0.41
RABGGTA-207ENST00000558936 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
RABGGTA-207ENST00000558936 CRB1P82279 1406 aa17.61■□□□□ 0.41
RABGGTA-207ENST00000558936 ANKRD26Q9UPS8 1709 aa17.61■□□□□ 0.41
RABGGTA-207ENST00000558936 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
RABGGTA-207ENST00000558936 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
RABGGTA-207ENST00000558936 WDR17Q8IZU2 1322 aa17.6■□□□□ 0.41
RABGGTA-207ENST00000558936 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
RABGGTA-207ENST00000558936 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
RABGGTA-207ENST00000558936 MAP2P11137 1827 aaKnown RBP17.6■□□□□ 0.41
RABGGTA-207ENST00000558936 FAM208AQ9UK61 1670 aaKnown RBP17.59■□□□□ 0.41
RABGGTA-207ENST00000558936 PER1O15534 1290 aaPredicted RBP17.59■□□□□ 0.41
RABGGTA-207ENST00000558936 ERBB3P21860 1342 aa17.58■□□□□ 0.4
RABGGTA-207ENST00000558936 EVA1CP58658 441 aa17.58■□□□□ 0.4
RABGGTA-207ENST00000558936 COG3Q96JB2 828 aa17.58■□□□□ 0.4
RABGGTA-207ENST00000558936 KRT27Q7Z3Y8 459 aa17.57■□□□□ 0.4
RABGGTA-207ENST00000558936 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
RABGGTA-207ENST00000558936 IP6K1Q92551 441 aa17.57■□□□□ 0.4
RABGGTA-207ENST00000558936 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
RABGGTA-207ENST00000558936 HOXC9P31274 260 aa17.56■□□□□ 0.4
RABGGTA-207ENST00000558936 TNS1Q9HBL0 1735 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-207ENST00000558936 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
RABGGTA-207ENST00000558936 AMER1Q5JTC6 1135 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-207ENST00000558936 ANKRD24Q8TF21 1146 aa17.54■□□□□ 0.4
RABGGTA-207ENST00000558936 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
RABGGTA-207ENST00000558936 EMILIN1Q9Y6C2 1016 aa17.54■□□□□ 0.4
RABGGTA-207ENST00000558936 SHANK3Q9BYB0 1731 aa17.53■□□□□ 0.4
RABGGTA-207ENST00000558936 HSP90AB2PQ58FF8 381 aa17.53■□□□□ 0.4
RABGGTA-207ENST00000558936 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
RABGGTA-207ENST00000558936 PTF1AQ7RTS3 328 aa17.52■□□□□ 0.4
RABGGTA-207ENST00000558936 THRAP3Q9Y2W1 955 aaKnown RBP17.52■□□□□ 0.4
RABGGTA-207ENST00000558936 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-207ENST00000558936 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
RABGGTA-207ENST00000558936 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
RABGGTA-207ENST00000558936 DEFB132Q7Z7B7 95 aa17.49■□□□□ 0.39
RABGGTA-207ENST00000558936 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-207ENST00000558936 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-207ENST00000558936 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
RABGGTA-207ENST00000558936 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
RABGGTA-207ENST00000558936 A0A0G2JS52 829 aa17.47■□□□□ 0.39
RABGGTA-207ENST00000558936 MYT1Q01538 1121 aa17.47■□□□□ 0.39
RABGGTA-207ENST00000558936 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
RABGGTA-207ENST00000558936 MEGF6O75095 1541 aa17.47■□□□□ 0.39
RABGGTA-207ENST00000558936 INSRP06213 1382 aa17.46■□□□□ 0.39
RABGGTA-207ENST00000558936 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
RABGGTA-207ENST00000558936 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
RABGGTA-207ENST00000558936 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
RABGGTA-207ENST00000558936 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
RABGGTA-207ENST00000558936 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-207ENST00000558936 AMPHP49418 695 aa17.45■□□□□ 0.38
RABGGTA-207ENST00000558936 USHBP1Q8N6Y0 703 aa17.45■□□□□ 0.38
RABGGTA-207ENST00000558936 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-207ENST00000558936 FLT4P35916 1363 aa17.44■□□□□ 0.38
RABGGTA-207ENST00000558936 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
RABGGTA-207ENST00000558936 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
RABGGTA-207ENST00000558936 TNS2Q63HR2 1409 aa17.42■□□□□ 0.38
RABGGTA-207ENST00000558936 TRIM37O94972 964 aa17.42■□□□□ 0.38
RABGGTA-207ENST00000558936 DDB1Q16531 1140 aa17.41■□□□□ 0.38
RABGGTA-207ENST00000558936 NSD2O96028 1365 aa17.4■□□□□ 0.38
RABGGTA-207ENST00000558936 BCL9O00512 1426 aa17.4■□□□□ 0.38
RABGGTA-207ENST00000558936 IL2RBP14784 551 aa17.4■□□□□ 0.38
RABGGTA-207ENST00000558936 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
RABGGTA-207ENST00000558936 EIF4A2Q14240 407 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-207ENST00000558936 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
RABGGTA-207ENST00000558936 EYA1Q99502 592 aa17.39■□□□□ 0.37
RABGGTA-207ENST00000558936 KCNQ2O43526 872 aa17.38■□□□□ 0.37
RABGGTA-207ENST00000558936 EN1Q05925 392 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-207ENST00000558936 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-207ENST00000558936 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
RABGGTA-207ENST00000558936 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
RABGGTA-207ENST00000558936 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
RABGGTA-207ENST00000558936 RREB1Q92766 1687 aa17.37■□□□□ 0.37
RABGGTA-207ENST00000558936 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-207ENST00000558936 CDCA7Q9BWT1 371 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-207ENST00000558936 PKD1L3Q7Z443 1732 aa17.37■□□□□ 0.37
RABGGTA-207ENST00000558936 EXOC5O00471 708 aa17.36■□□□□ 0.37
RABGGTA-207ENST00000558936 EZH2Q15910 746 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-207ENST00000558936 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
RABGGTA-207ENST00000558936 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
RABGGTA-207ENST00000558936 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
RABGGTA-207ENST00000558936 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
RABGGTA-207ENST00000558936 SRCAPQ6ZRS2 3230 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms