RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 A0A0G2JS52 829 aa21.85■■□□□ 1.09
RABGGTA-206ENST00000558649 MYT1Q01538 1121 aa21.85■■□□□ 1.09
RABGGTA-206ENST00000558649 USP35Q9P2H5 1018 aa21.85■■□□□ 1.09
RABGGTA-206ENST00000558649 CCDC7Q96M83 1385 aa21.85■■□□□ 1.09
RABGGTA-206ENST00000558649 CGNL1Q0VF96 1302 aa21.84■■□□□ 1.09
RABGGTA-206ENST00000558649 ANKRD26Q9UPS8 1709 aa21.84■■□□□ 1.09
RABGGTA-206ENST00000558649 LARP1Q6PKG0 1096 aaKnown RBP21.84■■□□□ 1.09
RABGGTA-206ENST00000558649 AXIN2Q9Y2T1 843 aa21.84■■□□□ 1.09
RABGGTA-206ENST00000558649 SPATA31A5Q5VU36 1347 aa21.83■■□□□ 1.09
RABGGTA-206ENST00000558649 SPATA31A7Q8IWB4 1347 aa21.83■■□□□ 1.09
RABGGTA-206ENST00000558649 FBLN1P23142 703 aa21.83■■□□□ 1.09
RABGGTA-206ENST00000558649 FAM98CQ17RN3 349 aaKnown RBP21.83■■□□□ 1.09
RABGGTA-206ENST00000558649 BRWD3Q6RI45 1802 aa21.83■■□□□ 1.08
RABGGTA-206ENST00000558649 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
RABGGTA-206ENST00000558649 ABCC6O95255 1503 aa21.82■■□□□ 1.08
RABGGTA-206ENST00000558649 SPATA31A1Q5TZJ5 1347 aa21.8■■□□□ 1.08
RABGGTA-206ENST00000558649 CSB-PGBD3P0DP91 1061 aa21.8■■□□□ 1.08
RABGGTA-206ENST00000558649 SEPT12Q8IYM1 358 aa21.79■■□□□ 1.08
RABGGTA-206ENST00000558649 CRB1P82279 1406 aa21.79■■□□□ 1.08
RABGGTA-206ENST00000558649 RRS1Q15050 365 aaKnown RBP21.78■■□□□ 1.08
RABGGTA-206ENST00000558649 TOM1L2Q6ZVM7 507 aa21.78■■□□□ 1.08
RABGGTA-206ENST00000558649 THSD7AQ9UPZ6 1657 aa21.78■■□□□ 1.08
RABGGTA-206ENST00000558649 MAP3K19Q56UN5 1328 aa21.78■■□□□ 1.08
RABGGTA-206ENST00000558649 KNSTRNQ9Y448 316 aa21.77■■□□□ 1.08
RABGGTA-206ENST00000558649 WDR17Q8IZU2 1322 aa21.77■■□□□ 1.07
RABGGTA-206ENST00000558649 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
RABGGTA-206ENST00000558649 AMPHP49418 695 aa21.76■■□□□ 1.07
RABGGTA-206ENST00000558649 WNK3Q9BYP7 1800 aa21.76■■□□□ 1.07
RABGGTA-206ENST00000558649 TNNT2P45379 298 aaPredicted RBP21.75■■□□□ 1.07
RABGGTA-206ENST00000558649 PEAK1Q9H792 1746 aa21.75■■□□□ 1.07
RABGGTA-206ENST00000558649 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
RABGGTA-206ENST00000558649 LTV1Q96GA3 475 aaPredicted RBP21.74■■□□□ 1.07
RABGGTA-206ENST00000558649 BLMP54132 1417 aaPredicted RBP21.73■■□□□ 1.07
RABGGTA-206ENST00000558649 ANKRD24Q8TF21 1146 aa21.73■■□□□ 1.07
RABGGTA-206ENST00000558649 IP6K1Q92551 441 aa21.73■■□□□ 1.07
RABGGTA-206ENST00000558649 ERBB3P21860 1342 aa21.73■■□□□ 1.07
RABGGTA-206ENST00000558649 MAP2P11137 1827 aaKnown RBP21.73■■□□□ 1.07
RABGGTA-206ENST00000558649 ONECUT3O60422 494 aaPredicted RBP21.72■■□□□ 1.07
RABGGTA-206ENST00000558649 HOXC9P31274 260 aa21.72■■□□□ 1.07
RABGGTA-206ENST00000558649 FAM208AQ9UK61 1670 aaKnown RBP21.72■■□□□ 1.07
RABGGTA-206ENST00000558649 RTL1A6NKG5 1358 aa21.72■■□□□ 1.07
RABGGTA-206ENST00000558649 NSD2O96028 1365 aa21.72■■□□□ 1.07
RABGGTA-206ENST00000558649 NLRP2Q9NX02 1062 aa21.71■■□□□ 1.07
RABGGTA-206ENST00000558649 RGPD2P0DJD1 1756 aa21.7■■□□□ 1.06
RABGGTA-206ENST00000558649 PPM1GO15355 546 aaPredicted RBP21.7■■□□□ 1.06
RABGGTA-206ENST00000558649 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
RABGGTA-206ENST00000558649 EMILIN1Q9Y6C2 1016 aa21.7■■□□□ 1.06
RABGGTA-206ENST00000558649 PARP4Q9UKK3 1724 aaKnown RBP21.69■■□□□ 1.06
RABGGTA-206ENST00000558649 BARGINQ6ZT62 677 aa21.69■■□□□ 1.06
RABGGTA-206ENST00000558649 KRT27Q7Z3Y8 459 aa21.69■■□□□ 1.06
RABGGTA-206ENST00000558649 THRAP3Q9Y2W1 955 aaKnown RBP21.69■■□□□ 1.06
RABGGTA-206ENST00000558649 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
RABGGTA-206ENST00000558649 LRRC37A3O60309 1634 aa21.68■■□□□ 1.06
RABGGTA-206ENST00000558649 FLT4P35916 1363 aa21.67■■□□□ 1.06
RABGGTA-206ENST00000558649 CARD10Q9BWT7 1032 aa21.67■■□□□ 1.06
RABGGTA-206ENST00000558649 SMG6Q86US8 1419 aaKnown RBP21.66■■□□□ 1.06
RABGGTA-206ENST00000558649 AMER1Q5JTC6 1135 aaPredicted RBP21.66■■□□□ 1.06
RABGGTA-206ENST00000558649 CC2D1BQ5T0F9 858 aaKnown RBP21.66■■□□□ 1.06
RABGGTA-206ENST00000558649 FAM182BQ5T319 152 aa21.66■■□□□ 1.06
RABGGTA-206ENST00000558649 UPF1Q92900 1129 aaKnown RBP eCLIP21.65■■□□□ 1.06
RABGGTA-206ENST00000558649 PER1O15534 1290 aaPredicted RBP21.64■■□□□ 1.05
RABGGTA-206ENST00000558649 HSP90AB2PQ58FF8 381 aa21.64■■□□□ 1.05
RABGGTA-206ENST00000558649 KIF24Q5T7B8 1368 aa21.63■■□□□ 1.05
RABGGTA-206ENST00000558649 INSRP06213 1382 aa21.62■■□□□ 1.05
RABGGTA-206ENST00000558649 PDE3BQ13370 1112 aa21.62■■□□□ 1.05
RABGGTA-206ENST00000558649 POLKQ9UBT6 870 aa21.62■■□□□ 1.05
RABGGTA-206ENST00000558649 DISP2A7MBM2 1401 aa21.61■■□□□ 1.05
RABGGTA-206ENST00000558649 DDB1Q16531 1140 aa21.59■■□□□ 1.05
RABGGTA-206ENST00000558649 USHBP1Q8N6Y0 703 aa21.59■■□□□ 1.05
RABGGTA-206ENST00000558649 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.05
RABGGTA-206ENST00000558649 IL2RBP14784 551 aa21.57■■□□□ 1.04
RABGGTA-206ENST00000558649 NBPF6Q5VWK0 638 aa21.56■■□□□ 1.04
RABGGTA-206ENST00000558649 NBPF4Q96M43 638 aa21.56■■□□□ 1.04
RABGGTA-206ENST00000558649 TNS2Q63HR2 1409 aa21.55■■□□□ 1.04
RABGGTA-206ENST00000558649 EP400Q96L91 3159 aa21.55■■□□□ 1.04
RABGGTA-206ENST00000558649 RGPD1P0DJD0 1748 aa21.55■■□□□ 1.04
RABGGTA-206ENST00000558649 NPC1L1Q9UHC9 1359 aa21.54■■□□□ 1.04
RABGGTA-206ENST00000558649 EXOC5O00471 708 aa21.53■■□□□ 1.04
RABGGTA-206ENST00000558649 MEGF6O75095 1541 aa21.53■■□□□ 1.04
RABGGTA-206ENST00000558649 FAM196AQ6ZSG2 479 aa21.52■■□□□ 1.04
RABGGTA-206ENST00000558649 OVOS2A0A0G2JMS6 1433 aa21.52■■□□□ 1.04
RABGGTA-206ENST00000558649 TNS1Q9HBL0 1735 aaKnown RBP21.52■■□□□ 1.03
RABGGTA-206ENST00000558649 DDX10Q13206 875 aaKnown RBP21.51■■□□□ 1.03
RABGGTA-206ENST00000558649 SF3B2Q13435 895 aaKnown RBP21.51■■□□□ 1.03
RABGGTA-206ENST00000558649 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
RABGGTA-206ENST00000558649 SHANK3Q9BYB0 1731 aa21.49■■□□□ 1.03
RABGGTA-206ENST00000558649 MTHFSP49914 203 aa21.49■■□□□ 1.03
RABGGTA-206ENST00000558649 MARCH10Q8NA82 808 aaPredicted RBP21.49■■□□□ 1.03
RABGGTA-206ENST00000558649 RAPGEF4Q8WZA2 1011 aa21.49■■□□□ 1.03
RABGGTA-206ENST00000558649 SBF2Q86WG5 1849 aa21.48■■□□□ 1.03
RABGGTA-206ENST00000558649 TRIM37O94972 964 aa21.48■■□□□ 1.03
RABGGTA-206ENST00000558649 CCDC125Q86Z20 511 aa21.48■■□□□ 1.03
RABGGTA-206ENST00000558649 EYA1Q99502 592 aa21.47■■□□□ 1.03
RABGGTA-206ENST00000558649 TATP17735 454 aaPredicted RBP21.46■■□□□ 1.03
RABGGTA-206ENST00000558649 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
RABGGTA-206ENST00000558649 DEFB132Q7Z7B7 95 aa21.44■■□□□ 1.02
RABGGTA-206ENST00000558649 NCAPD2Q15021 1401 aa21.44■■□□□ 1.02
RABGGTA-206ENST00000558649 ZCRB1Q8TBF4 217 aaKnown RBP21.43■■□□□ 1.02
RABGGTA-206ENST00000558649 PKD1L3Q7Z443 1732 aa21.43■■□□□ 1.02
RABGGTA-206ENST00000558649 IGSF1Q8N6C5 1336 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms