RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 RGS12O14924 1447 aa17.02■□□□□ 0.31
SMAD3-205ENST00000558428 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
SMAD3-205ENST00000558428 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
SMAD3-205ENST00000558428 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
SMAD3-205ENST00000558428 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
SMAD3-205ENST00000558428 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
SMAD3-205ENST00000558428 ABCC6O95255 1503 aa16.98■□□□□ 0.31
SMAD3-205ENST00000558428 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
SMAD3-205ENST00000558428 FBLN1P23142 703 aa16.97■□□□□ 0.31
SMAD3-205ENST00000558428 LARP1Q6PKG0 1096 aaKnown RBP16.97■□□□□ 0.31
SMAD3-205ENST00000558428 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
SMAD3-205ENST00000558428 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
SMAD3-205ENST00000558428 SOCS7O14512 581 aa16.96■□□□□ 0.31
SMAD3-205ENST00000558428 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
SMAD3-205ENST00000558428 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.3
SMAD3-205ENST00000558428 A0A0G2JS52 829 aa16.95■□□□□ 0.3
SMAD3-205ENST00000558428 MYT1Q01538 1121 aa16.95■□□□□ 0.3
SMAD3-205ENST00000558428 RRS1Q15050 365 aaKnown RBP16.95■□□□□ 0.3
SMAD3-205ENST00000558428 FAM98CQ17RN3 349 aaKnown RBP16.95■□□□□ 0.3
SMAD3-205ENST00000558428 CSB-PGBD3P0DP91 1061 aa16.94■□□□□ 0.3
SMAD3-205ENST00000558428 AMPHP49418 695 aa16.94■□□□□ 0.3
SMAD3-205ENST00000558428 CRB1P82279 1406 aa16.94■□□□□ 0.3
SMAD3-205ENST00000558428 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
SMAD3-205ENST00000558428 NSD2O96028 1365 aa16.93■□□□□ 0.3
SMAD3-205ENST00000558428 TOM1L2Q6ZVM7 507 aa16.93■□□□□ 0.3
SMAD3-205ENST00000558428 SEPT12Q8IYM1 358 aa16.93■□□□□ 0.3
SMAD3-205ENST00000558428 IP6K1Q92551 441 aa16.93■□□□□ 0.3
SMAD3-205ENST00000558428 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
SMAD3-205ENST00000558428 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
SMAD3-205ENST00000558428 ONECUT3O60422 494 aaPredicted RBP16.92■□□□□ 0.3
SMAD3-205ENST00000558428 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
SMAD3-205ENST00000558428 BLMP54132 1417 aaPredicted RBP16.92■□□□□ 0.3
SMAD3-205ENST00000558428 HOXC9P31274 260 aa16.91■□□□□ 0.3
SMAD3-205ENST00000558428 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
SMAD3-205ENST00000558428 ERBB3P21860 1342 aa16.91■□□□□ 0.3
SMAD3-205ENST00000558428 RTL1A6NKG5 1358 aa16.9■□□□□ 0.3
SMAD3-205ENST00000558428 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
SMAD3-205ENST00000558428 THRAP3Q9Y2W1 955 aaKnown RBP16.9■□□□□ 0.3
SMAD3-205ENST00000558428 THSD7AQ9UPZ6 1657 aa16.9■□□□□ 0.3
SMAD3-205ENST00000558428 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-205ENST00000558428 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-205ENST00000558428 BARGINQ6ZT62 677 aa16.89■□□□□ 0.29
SMAD3-205ENST00000558428 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-205ENST00000558428 PEAK1Q9H792 1746 aa16.89■□□□□ 0.29
SMAD3-205ENST00000558428 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
SMAD3-205ENST00000558428 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
SMAD3-205ENST00000558428 EMILIN1Q9Y6C2 1016 aa16.88■□□□□ 0.29
SMAD3-205ENST00000558428 EP400Q96L91 3159 aa16.88■□□□□ 0.29
SMAD3-205ENST00000558428 FLT4P35916 1363 aa16.88■□□□□ 0.29
SMAD3-205ENST00000558428 WNK3Q9BYP7 1800 aa16.87■□□□□ 0.29
SMAD3-205ENST00000558428 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
SMAD3-205ENST00000558428 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
SMAD3-205ENST00000558428 FAM208AQ9UK61 1670 aaKnown RBP16.87■□□□□ 0.29
SMAD3-205ENST00000558428 KIF24Q5T7B8 1368 aa16.87■□□□□ 0.29
SMAD3-205ENST00000558428 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
SMAD3-205ENST00000558428 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
SMAD3-205ENST00000558428 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
SMAD3-205ENST00000558428 HSP90AB2PQ58FF8 381 aa16.85■□□□□ 0.29
SMAD3-205ENST00000558428 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
SMAD3-205ENST00000558428 INSRP06213 1382 aa16.85■□□□□ 0.29
SMAD3-205ENST00000558428 SMG6Q86US8 1419 aaKnown RBP16.85■□□□□ 0.29
SMAD3-205ENST00000558428 PARP4Q9UKK3 1724 aaKnown RBP16.84■□□□□ 0.29
SMAD3-205ENST00000558428 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
SMAD3-205ENST00000558428 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.28
SMAD3-205ENST00000558428 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
SMAD3-205ENST00000558428 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
SMAD3-205ENST00000558428 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMAD3-205ENST00000558428 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
SMAD3-205ENST00000558428 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
SMAD3-205ENST00000558428 DDB1Q16531 1140 aa16.8■□□□□ 0.28
SMAD3-205ENST00000558428 IL2RBP14784 551 aa16.79■□□□□ 0.28
SMAD3-205ENST00000558428 FAM182BQ5T319 152 aa16.79■□□□□ 0.28
SMAD3-205ENST00000558428 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
SMAD3-205ENST00000558428 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
SMAD3-205ENST00000558428 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
SMAD3-205ENST00000558428 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.28
SMAD3-205ENST00000558428 EXOC5O00471 708 aa16.76■□□□□ 0.27
SMAD3-205ENST00000558428 MTHFSP49914 203 aa16.75■□□□□ 0.27
SMAD3-205ENST00000558428 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
SMAD3-205ENST00000558428 TNS2Q63HR2 1409 aa16.75■□□□□ 0.27
SMAD3-205ENST00000558428 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
SMAD3-205ENST00000558428 EYA1Q99502 592 aa16.73■□□□□ 0.27
SMAD3-205ENST00000558428 MEGF6O75095 1541 aa16.73■□□□□ 0.27
SMAD3-205ENST00000558428 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
SMAD3-205ENST00000558428 OVOS2A0A0G2JMS6 1433 aa16.72■□□□□ 0.27
SMAD3-205ENST00000558428 CCDC125Q86Z20 511 aa16.72■□□□□ 0.27
SMAD3-205ENST00000558428 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
SMAD3-205ENST00000558428 RAPGEF4Q8WZA2 1011 aa16.72■□□□□ 0.27
SMAD3-205ENST00000558428 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
SMAD3-205ENST00000558428 SF3B2Q13435 895 aaKnown RBP16.71■□□□□ 0.27
SMAD3-205ENST00000558428 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
SMAD3-205ENST00000558428 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
SMAD3-205ENST00000558428 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
SMAD3-205ENST00000558428 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
SMAD3-205ENST00000558428 TRIM37O94972 964 aa16.69■□□□□ 0.26
SMAD3-205ENST00000558428 ZCRB1Q8TBF4 217 aaKnown RBP16.69■□□□□ 0.26
SMAD3-205ENST00000558428 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
SMAD3-205ENST00000558428 IL13P35225 146 aa16.68■□□□□ 0.26
SMAD3-205ENST00000558428 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
SMAD3-205ENST00000558428 SHANK3Q9BYB0 1731 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms