RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 NEXMIFQ5QGS0 1516 aa9.27□□□□□ -0.93
IDH3A-204ENST00000558016 ROBO1Q9Y6N7 1651 aa9.27□□□□□ -0.93
IDH3A-204ENST00000558016 PPP1R3GB7ZBB8 358 aa9.27□□□□□ -0.93
IDH3A-204ENST00000558016 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
IDH3A-204ENST00000558016 COL9A1P20849 921 aa9.27□□□□□ -0.93
IDH3A-204ENST00000558016 E2F4Q16254 413 aa9.27□□□□□ -0.93
IDH3A-204ENST00000558016 XIRP1Q702N8 1843 aaKnown RBP9.26□□□□□ -0.93
IDH3A-204ENST00000558016 SETD5Q9C0A6 1442 aa9.26□□□□□ -0.93
IDH3A-204ENST00000558016 GOLGA8CPA6NN73 597 aa9.26□□□□□ -0.93
IDH3A-204ENST00000558016 PROX2Q3B8N5 592 aa9.26□□□□□ -0.93
IDH3A-204ENST00000558016 EPAS1Q99814 870 aa9.26□□□□□ -0.93
IDH3A-204ENST00000558016 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
IDH3A-204ENST00000558016 PTPN5P54829 565 aa9.25□□□□□ -0.93
IDH3A-204ENST00000558016 RGL3Q3MIN7 710 aa9.25□□□□□ -0.93
IDH3A-204ENST00000558016 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
IDH3A-204ENST00000558016 CHD2O14647 1828 aaKnown RBP9.25□□□□□ -0.93
IDH3A-204ENST00000558016 ACIN1Q9UKV3 1341 aaKnown RBP9.25□□□□□ -0.93
IDH3A-204ENST00000558016 NRXN3Q9Y4C0 1643 aa9.24□□□□□ -0.93
IDH3A-204ENST00000558016 FAM135BQ49AJ0 1406 aa9.24□□□□□ -0.93
IDH3A-204ENST00000558016 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
IDH3A-204ENST00000558016 MPHOSPH9Q99550 1183 aa9.24□□□□□ -0.93
IDH3A-204ENST00000558016 XRN1Q8IZH2 1706 aaKnown RBP9.24□□□□□ -0.93
IDH3A-204ENST00000558016 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
IDH3A-204ENST00000558016 NCOA3Q9Y6Q9 1424 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 PHLPP1O60346 1717 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 NBR1Q14596 966 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 RPGRIP1LQ68CZ1 1315 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 METP08581 1390 aa9.23□□□□□ -0.93
IDH3A-204ENST00000558016 PTPRUQ92729 1446 aa9.22□□□□□ -0.93
IDH3A-204ENST00000558016 PDIA6Q15084 440 aa9.22□□□□□ -0.93
IDH3A-204ENST00000558016 MEX3CQ5U5Q3 659 aaKnown RBP9.22□□□□□ -0.93
IDH3A-204ENST00000558016 ILDR2Q71H61 639 aa9.22□□□□□ -0.93
IDH3A-204ENST00000558016 WNT2BQ93097 391 aa9.22□□□□□ -0.93
IDH3A-204ENST00000558016 DCCP43146 1447 aa9.22□□□□□ -0.93
IDH3A-204ENST00000558016 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
IDH3A-204ENST00000558016 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.94
IDH3A-204ENST00000558016 C19orf44Q9H6X5 657 aa9.21□□□□□ -0.94
IDH3A-204ENST00000558016 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.21□□□□□ -0.94
IDH3A-204ENST00000558016 ANKRD30BQ9BXX2 1392 aa9.21□□□□□ -0.94
IDH3A-204ENST00000558016 PTCH1Q13635 1447 aa9.21□□□□□ -0.94
IDH3A-204ENST00000558016 PPLO60437 1756 aa9.2□□□□□ -0.94
IDH3A-204ENST00000558016 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
IDH3A-204ENST00000558016 JCADQ9P266 1359 aa9.2□□□□□ -0.94
IDH3A-204ENST00000558016 THSD4Q6ZMP0 1018 aa9.19□□□□□ -0.94
IDH3A-204ENST00000558016 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
IDH3A-204ENST00000558016 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
IDH3A-204ENST00000558016 STK26Q9P289 416 aa9.19□□□□□ -0.94
IDH3A-204ENST00000558016 ASXL1Q8IXJ9 1541 aa9.19□□□□□ -0.94
IDH3A-204ENST00000558016 NALCNQ8IZF0 1738 aa9.19□□□□□ -0.94
IDH3A-204ENST00000558016 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
IDH3A-204ENST00000558016 SOCS7O14512 581 aa9.18□□□□□ -0.94
IDH3A-204ENST00000558016 MAP3K7O43318 606 aa9.18□□□□□ -0.94
IDH3A-204ENST00000558016 AHDC1Q5TGY3 1603 aaPredicted RBP9.17□□□□□ -0.94
IDH3A-204ENST00000558016 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
IDH3A-204ENST00000558016 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
IDH3A-204ENST00000558016 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
IDH3A-204ENST00000558016 MST1RQ04912 1400 aa9.16□□□□□ -0.94
IDH3A-204ENST00000558016 SPATA31E1Q6ZUB1 1445 aa9.16□□□□□ -0.94
IDH3A-204ENST00000558016 ROBO2Q9HCK4 1378 aa9.16□□□□□ -0.94
IDH3A-204ENST00000558016 ADGRF5Q8IZF2 1346 aa9.16□□□□□ -0.94
IDH3A-204ENST00000558016 NUTM2BA6NNL0 878 aaPredicted RBP9.16□□□□□ -0.94
IDH3A-204ENST00000558016 NUTM2EB1AL46 878 aaPredicted RBP9.16□□□□□ -0.94
IDH3A-204ENST00000558016 BRINP3Q76B58 766 aa9.16□□□□□ -0.94
IDH3A-204ENST00000558016 NUTM2AQ8IVF1 878 aaPredicted RBP9.16□□□□□ -0.94
IDH3A-204ENST00000558016 ARIH1Q9Y4X5 557 aaPredicted RBP9.16□□□□□ -0.94
IDH3A-204ENST00000558016 SETD1AO15047 1707 aaKnown RBP9.16□□□□□ -0.94
IDH3A-204ENST00000558016 PIK3C2GO75747 1445 aa9.15□□□□□ -0.94
IDH3A-204ENST00000558016 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
IDH3A-204ENST00000558016 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
IDH3A-204ENST00000558016 LAMC1P11047 1609 aa9.15□□□□□ -0.94
IDH3A-204ENST00000558016 MYOM2P54296 1465 aa9.15□□□□□ -0.95
IDH3A-204ENST00000558016 IFT172Q9UG01 1749 aa9.14□□□□□ -0.95
IDH3A-204ENST00000558016 CDC42BPGQ6DT37 1551 aa9.14□□□□□ -0.95
IDH3A-204ENST00000558016 LRPPRCP42704 1394 aaKnown RBP9.13□□□□□ -0.95
IDH3A-204ENST00000558016 SPATA31A6Q5VVP1 1343 aa9.13□□□□□ -0.95
IDH3A-204ENST00000558016 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
IDH3A-204ENST00000558016 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
IDH3A-204ENST00000558016 TMEM132EQ6IEE7 984 aa9.13□□□□□ -0.95
IDH3A-204ENST00000558016 ANKK1Q8NFD2 765 aa9.13□□□□□ -0.95
IDH3A-204ENST00000558016 C1orf167Q5SNV9 1468 aa9.13□□□□□ -0.95
IDH3A-204ENST00000558016 YTHDC2Q9H6S0 1430 aaKnown RBP9.13□□□□□ -0.95
IDH3A-204ENST00000558016 DHX57Q6P158 1386 aaKnown RBP9.12□□□□□ -0.95
IDH3A-204ENST00000558016 NUTM2FA1L443 756 aa9.12□□□□□ -0.95
IDH3A-204ENST00000558016 SAFB2Q14151 953 aaKnown RBP eCLIP9.12□□□□□ -0.95
IDH3A-204ENST00000558016 LAPTM4BQ86VI4 370 aa9.12□□□□□ -0.95
IDH3A-204ENST00000558016 POGKQ9P215 609 aa9.12□□□□□ -0.95
IDH3A-204ENST00000558016 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
IDH3A-204ENST00000558016 SHPRHQ149N8 1683 aa9.12□□□□□ -0.95
IDH3A-204ENST00000558016 NHSL1Q5SYE7 1610 aa9.12□□□□□ -0.95
IDH3A-204ENST00000558016 KNDC1Q76NI1 1749 aa9.11□□□□□ -0.95
IDH3A-204ENST00000558016 BCAMP50895 628 aa9.11□□□□□ -0.95
IDH3A-204ENST00000558016 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
IDH3A-204ENST00000558016 DDX17Q92841 729 aaKnown RBP9.11□□□□□ -0.95
IDH3A-204ENST00000558016 LRRC59Q96AG4 307 aaKnown RBP9.11□□□□□ -0.95
IDH3A-204ENST00000558016 ZFRQ96KR1 1074 aaKnown RBP9.11□□□□□ -0.95
IDH3A-204ENST00000558016 PRAG1Q86YV5 1406 aa9.11□□□□□ -0.95
IDH3A-204ENST00000558016 LRP6O75581 1613 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms