RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 POTEAQ6S8J7 498 aa18.66■□□□□ 0.58
SHMT2-234ENST00000557703 LMO7Q8WWI1 1683 aa18.66■□□□□ 0.58
SHMT2-234ENST00000557703 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
SHMT2-234ENST00000557703 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
SHMT2-234ENST00000557703 CAMTA1Q9Y6Y1 1673 aa18.64■□□□□ 0.57
SHMT2-234ENST00000557703 ANKRD26Q9UPS8 1709 aa18.64■□□□□ 0.57
SHMT2-234ENST00000557703 SOX12O15370 315 aa18.64■□□□□ 0.57
SHMT2-234ENST00000557703 AMPHP49418 695 aa18.64■□□□□ 0.57
SHMT2-234ENST00000557703 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.57
SHMT2-234ENST00000557703 COL18A1P39060 1754 aa18.63■□□□□ 0.57
SHMT2-234ENST00000557703 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
SHMT2-234ENST00000557703 ONECUT3O60422 494 aaPredicted RBP18.63■□□□□ 0.57
SHMT2-234ENST00000557703 SPATA31A5Q5VU36 1347 aa18.63■□□□□ 0.57
SHMT2-234ENST00000557703 SPATA31A7Q8IWB4 1347 aa18.63■□□□□ 0.57
SHMT2-234ENST00000557703 COL5A2P05997 1499 aaPredicted RBP18.63■□□□□ 0.57
SHMT2-234ENST00000557703 WDR17Q8IZU2 1322 aa18.62■□□□□ 0.57
SHMT2-234ENST00000557703 FLT4P35916 1363 aa18.62■□□□□ 0.57
SHMT2-234ENST00000557703 NRAPQ86VF7 1730 aa18.61■□□□□ 0.57
SHMT2-234ENST00000557703 AXIN2Q9Y2T1 843 aa18.61■□□□□ 0.57
SHMT2-234ENST00000557703 CRB1P82279 1406 aa18.6■□□□□ 0.57
SHMT2-234ENST00000557703 SPATA31A1Q5TZJ5 1347 aa18.6■□□□□ 0.57
SHMT2-234ENST00000557703 HOXC9P31274 260 aa18.6■□□□□ 0.57
SHMT2-234ENST00000557703 BARGINQ6ZT62 677 aa18.6■□□□□ 0.57
SHMT2-234ENST00000557703 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
SHMT2-234ENST00000557703 LTN1O94822 1766 aa18.6■□□□□ 0.57
SHMT2-234ENST00000557703 INSRP06213 1382 aa18.59■□□□□ 0.57
SHMT2-234ENST00000557703 ERBB3P21860 1342 aa18.59■□□□□ 0.57
SHMT2-234ENST00000557703 ZBTB7CA1YPR0 619 aa18.59■□□□□ 0.57
SHMT2-234ENST00000557703 CARD10Q9BWT7 1032 aa18.59■□□□□ 0.57
SHMT2-234ENST00000557703 STRN4Q9NRL3 753 aa18.59■□□□□ 0.57
SHMT2-234ENST00000557703 POLKQ9UBT6 870 aa18.59■□□□□ 0.57
SHMT2-234ENST00000557703 CCDC9Q9Y3X0 531 aaKnown RBP18.59■□□□□ 0.57
SHMT2-234ENST00000557703 RRS1Q15050 365 aaKnown RBP18.58■□□□□ 0.56
SHMT2-234ENST00000557703 TCP11L2Q8N4U5 519 aa18.58■□□□□ 0.56
SHMT2-234ENST00000557703 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
SHMT2-234ENST00000557703 CSB-PGBD3P0DP91 1061 aa18.57■□□□□ 0.56
SHMT2-234ENST00000557703 LARP1Q6PKG0 1096 aaKnown RBP18.57■□□□□ 0.56
SHMT2-234ENST00000557703 TOM1L2Q6ZVM7 507 aa18.57■□□□□ 0.56
SHMT2-234ENST00000557703 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
SHMT2-234ENST00000557703 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
SHMT2-234ENST00000557703 MAP2P11137 1827 aaKnown RBP18.56■□□□□ 0.56
SHMT2-234ENST00000557703 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
SHMT2-234ENST00000557703 FAM208AQ9UK61 1670 aaKnown RBP18.54■□□□□ 0.56
SHMT2-234ENST00000557703 GLI3P10071 1580 aa18.53■□□□□ 0.56
SHMT2-234ENST00000557703 FBLN1P23142 703 aa18.53■□□□□ 0.56
SHMT2-234ENST00000557703 EMILIN1Q9Y6C2 1016 aa18.53■□□□□ 0.56
SHMT2-234ENST00000557703 TNNT2P45379 298 aaPredicted RBP18.52■□□□□ 0.56
SHMT2-234ENST00000557703 RALBP1Q15311 655 aa18.52■□□□□ 0.56
SHMT2-234ENST00000557703 PPM1GO15355 546 aaPredicted RBP18.51■□□□□ 0.55
SHMT2-234ENST00000557703 HSP90AB2PQ58FF8 381 aa18.51■□□□□ 0.55
SHMT2-234ENST00000557703 NLRP2Q9NX02 1062 aa18.51■□□□□ 0.55
SHMT2-234ENST00000557703 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
SHMT2-234ENST00000557703 FAM98CQ17RN3 349 aaKnown RBP18.5■□□□□ 0.55
SHMT2-234ENST00000557703 SEPT12Q8IYM1 358 aa18.5■□□□□ 0.55
SHMT2-234ENST00000557703 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
SHMT2-234ENST00000557703 MTHFSP49914 203 aa18.48■□□□□ 0.55
SHMT2-234ENST00000557703 USP35Q9P2H5 1018 aa18.48■□□□□ 0.55
SHMT2-234ENST00000557703 RGS12O14924 1447 aa18.48■□□□□ 0.55
SHMT2-234ENST00000557703 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
SHMT2-234ENST00000557703 PEAK1Q9H792 1746 aa18.46■□□□□ 0.55
SHMT2-234ENST00000557703 IL2RBP14784 551 aa18.46■□□□□ 0.55
SHMT2-234ENST00000557703 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
SHMT2-234ENST00000557703 KRT27Q7Z3Y8 459 aa18.45■□□□□ 0.54
SHMT2-234ENST00000557703 LTV1Q96GA3 475 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-234ENST00000557703 THSD7AQ9UPZ6 1657 aa18.44■□□□□ 0.54
SHMT2-234ENST00000557703 A0A0G2JS52 829 aa18.44■□□□□ 0.54
SHMT2-234ENST00000557703 EXOC5O00471 708 aa18.44■□□□□ 0.54
SHMT2-234ENST00000557703 MYT1Q01538 1121 aa18.44■□□□□ 0.54
SHMT2-234ENST00000557703 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
SHMT2-234ENST00000557703 NBPF6Q5VWK0 638 aa18.44■□□□□ 0.54
SHMT2-234ENST00000557703 NBPF4Q96M43 638 aa18.44■□□□□ 0.54
SHMT2-234ENST00000557703 DISP2A7MBM2 1401 aa18.43■□□□□ 0.54
SHMT2-234ENST00000557703 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
SHMT2-234ENST00000557703 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
SHMT2-234ENST00000557703 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
SHMT2-234ENST00000557703 DDB1Q16531 1140 aa18.43■□□□□ 0.54
SHMT2-234ENST00000557703 DIAPH1O60610 1272 aaKnown RBP18.42■□□□□ 0.54
SHMT2-234ENST00000557703 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
SHMT2-234ENST00000557703 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
SHMT2-234ENST00000557703 PARP4Q9UKK3 1724 aaKnown RBP18.41■□□□□ 0.54
SHMT2-234ENST00000557703 EYA1Q99502 592 aa18.41■□□□□ 0.54
SHMT2-234ENST00000557703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.54
SHMT2-234ENST00000557703 IGSF1Q8N6C5 1336 aa18.41■□□□□ 0.54
SHMT2-234ENST00000557703 IL13P35225 146 aa18.4■□□□□ 0.54
SHMT2-234ENST00000557703 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
SHMT2-234ENST00000557703 TATP17735 454 aaPredicted RBP18.39■□□□□ 0.53
SHMT2-234ENST00000557703 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
SHMT2-234ENST00000557703 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
SHMT2-234ENST00000557703 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
SHMT2-234ENST00000557703 BCL9O00512 1426 aa18.39■□□□□ 0.53
SHMT2-234ENST00000557703 KDRP35968 1356 aa18.37■□□□□ 0.53
SHMT2-234ENST00000557703 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
SHMT2-234ENST00000557703 TNS2Q63HR2 1409 aa18.37■□□□□ 0.53
SHMT2-234ENST00000557703 WNK3Q9BYP7 1800 aa18.37■□□□□ 0.53
SHMT2-234ENST00000557703 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
SHMT2-234ENST00000557703 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
SHMT2-234ENST00000557703 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
SHMT2-234ENST00000557703 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
SHMT2-234ENST00000557703 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
SHMT2-234ENST00000557703 ANP32CO43423 234 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms