RNA–Protein interactions for RNA: ENST00000557589.1

TIMELESS-205, Transcript of timeless circadian regulator, humanhuman

TSL 2

Gene TIMELESS, Length 2,784 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-205ENST00000557589 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
TIMELESS-205ENST00000557589 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
TIMELESS-205ENST00000557589 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
TIMELESS-205ENST00000557589 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
TIMELESS-205ENST00000557589 TBC1D32Q96NH3 1257 aa12.82□□□□□ -0.36
TIMELESS-205ENST00000557589 RIPK4P57078 832 aa12.82□□□□□ -0.36
TIMELESS-205ENST00000557589 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
TIMELESS-205ENST00000557589 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 TRIM27P14373 513 aa12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 UBR1Q8IWV7 1749 aa12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 SSH1Q8WYL5 1049 aa12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
TIMELESS-205ENST00000557589 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
TIMELESS-205ENST00000557589 HAP1P54257 671 aaPredicted RBP12.8□□□□□ -0.36
TIMELESS-205ENST00000557589 POLKQ9UBT6 870 aa12.8□□□□□ -0.36
TIMELESS-205ENST00000557589 NAP1L2Q9ULW6 460 aaPredicted RBP12.8□□□□□ -0.36
TIMELESS-205ENST00000557589 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
TIMELESS-205ENST00000557589 GNAI1P63096 354 aa12.8□□□□□ -0.36
TIMELESS-205ENST00000557589 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
TIMELESS-205ENST00000557589 SAFB2Q14151 953 aaKnown RBP eCLIP12.79□□□□□ -0.36
TIMELESS-205ENST00000557589 GSE1Q14687 1217 aa12.79□□□□□ -0.36
TIMELESS-205ENST00000557589 ESF1Q9H501 851 aaKnown RBP12.78□□□□□ -0.36
TIMELESS-205ENST00000557589 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
TIMELESS-205ENST00000557589 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.36
TIMELESS-205ENST00000557589 CFAP44Q96MT7 982 aa12.77□□□□□ -0.36
TIMELESS-205ENST00000557589 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.37
TIMELESS-205ENST00000557589 IL13P35225 146 aa12.77□□□□□ -0.37
TIMELESS-205ENST00000557589 CCDC61Q9Y6R9 512 aa12.77□□□□□ -0.37
TIMELESS-205ENST00000557589 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
TIMELESS-205ENST00000557589 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
TIMELESS-205ENST00000557589 GCC1Q96CN9 775 aa12.76□□□□□ -0.37
TIMELESS-205ENST00000557589 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
TIMELESS-205ENST00000557589 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 DIP2AQ14689 1571 aa12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 TNRQ92752 1358 aa12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 CEBPAP49715 358 aaPredicted RBP12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 TMEM2Q9UHN6 1383 aa12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 NUCB1Q02818 461 aa12.75□□□□□ -0.37
TIMELESS-205ENST00000557589 PLEKHG1Q9ULL1 1385 aa12.74□□□□□ -0.37
TIMELESS-205ENST00000557589 COG3Q96JB2 828 aa12.74□□□□□ -0.37
TIMELESS-205ENST00000557589 TNNQ9UQP3 1299 aa12.74□□□□□ -0.37
TIMELESS-205ENST00000557589 METP08581 1390 aa12.74□□□□□ -0.37
TIMELESS-205ENST00000557589 ABCC4O15439 1325 aa12.74□□□□□ -0.37
TIMELESS-205ENST00000557589 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 USP54Q70EL1 1684 aa12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 OVOS2A0A0J9YW53 1432 aa12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 OVOS2Q6IE36 1432 aa12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 API5Q9BZZ5 524 aaKnown RBP12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 ANTXR1Q9H6X2 564 aa12.73□□□□□ -0.37
TIMELESS-205ENST00000557589 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 VAMP4O75379 141 aa12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 SEC24BO95487 1268 aa12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 BBXQ8WY36 941 aaPredicted RBP12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 USP31Q70CQ4 1352 aa12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 ADAMTS13Q76LX8 1427 aa12.72□□□□□ -0.37
TIMELESS-205ENST00000557589 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.37
TIMELESS-205ENST00000557589 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
TIMELESS-205ENST00000557589 NAP1L5Q96NT1 182 aaPredicted RBP12.71□□□□□ -0.37
TIMELESS-205ENST00000557589 SLIT1O75093 1534 aa12.71□□□□□ -0.37
TIMELESS-205ENST00000557589 RBM25P49756 843 aaKnown RBP12.71□□□□□ -0.38
TIMELESS-205ENST00000557589 WAPLQ7Z5K2 1190 aa12.71□□□□□ -0.38
TIMELESS-205ENST00000557589 TTC21BQ7Z4L5 1316 aa12.7□□□□□ -0.38
TIMELESS-205ENST00000557589 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
TIMELESS-205ENST00000557589 HSP90AA2PQ14568 343 aaPredicted RBP12.7□□□□□ -0.38
TIMELESS-205ENST00000557589 SNX21Q969T3 373 aa12.7□□□□□ -0.38
TIMELESS-205ENST00000557589 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
TIMELESS-205ENST00000557589 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
TIMELESS-205ENST00000557589 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 C22orf23Q9BZE7 217 aa12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 ZNF142P52746 1687 aaPredicted RBP12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 ARHGAP23Q9P227 1491 aa12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 SSH2Q76I76 1423 aa12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 PRDM4Q9UKN5 801 aa12.69□□□□□ -0.38
TIMELESS-205ENST00000557589 TTC21AQ8NDW8 1320 aa12.68□□□□□ -0.38
TIMELESS-205ENST00000557589 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
TIMELESS-205ENST00000557589 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
TIMELESS-205ENST00000557589 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
TIMELESS-205ENST00000557589 USP6P35125 1406 aa12.68□□□□□ -0.38
TIMELESS-205ENST00000557589 CEP170BQ9Y4F5 1589 aaPredicted RBP12.67□□□□□ -0.38
TIMELESS-205ENST00000557589 NME9Q86XW9 330 aa12.67□□□□□ -0.38
TIMELESS-205ENST00000557589 PHACTR3Q96KR7 559 aa12.67□□□□□ -0.38
TIMELESS-205ENST00000557589 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
TIMELESS-205ENST00000557589 FRAT2O75474 233 aaPredicted RBP12.66□□□□□ -0.38
TIMELESS-205ENST00000557589 TWISTNBQ3B726 338 aaPredicted RBP12.66□□□□□ -0.38
TIMELESS-205ENST00000557589 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
TIMELESS-205ENST00000557589 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms