RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
FOXN3-216ENST00000557496 ZC3H4Q9UPT8 1303 aaKnown RBP6.71□□□□□ -1.34
FOXN3-216ENST00000557496 UPP2O95045 317 aa6.7□□□□□ -1.34
FOXN3-216ENST00000557496 MAN1A2O60476 641 aa6.69□□□□□ -1.34
FOXN3-216ENST00000557496 VSIG8P0DPA2 414 aa6.69□□□□□ -1.34
FOXN3-216ENST00000557496 BMP2P12643 396 aa6.69□□□□□ -1.34
FOXN3-216ENST00000557496 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
FOXN3-216ENST00000557496 SLC10A4Q96EP9 437 aa6.69□□□□□ -1.34
FOXN3-216ENST00000557496 OCSTAMPQ9BR26 566 aa6.69□□□□□ -1.34
FOXN3-216ENST00000557496 SOS2Q07890 1332 aaPredicted RBP6.69□□□□□ -1.34
FOXN3-216ENST00000557496 AP1G2O75843 785 aa6.68□□□□□ -1.34
FOXN3-216ENST00000557496 PPP1R26Q5T8A7 1209 aaPredicted RBP6.68□□□□□ -1.34
FOXN3-216ENST00000557496 TSEN34Q9BSV6 310 aaKnown RBP6.68□□□□□ -1.34
FOXN3-216ENST00000557496 HMX1Q9NP08 348 aaPredicted RBP6.68□□□□□ -1.34
FOXN3-216ENST00000557496 DNMT3LQ9UJW3 386 aa6.68□□□□□ -1.34
FOXN3-216ENST00000557496 CDV3Q9UKY7 258 aaKnown RBP6.68□□□□□ -1.34
FOXN3-216ENST00000557496 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
FOXN3-216ENST00000557496 Q6ZVU0 165 aa6.67□□□□□ -1.34
FOXN3-216ENST00000557496 ZBTB33Q86T24 672 aa6.67□□□□□ -1.34
FOXN3-216ENST00000557496 EPS8L1Q8TE68 723 aa6.67□□□□□ -1.34
FOXN3-216ENST00000557496 KCTD15Q96SI1 283 aaPredicted RBP6.67□□□□□ -1.34
FOXN3-216ENST00000557496 GPSM3Q9Y4H4 160 aa6.67□□□□□ -1.34
FOXN3-216ENST00000557496 PTK2Q05397 1052 aa6.66□□□□□ -1.34
FOXN3-216ENST00000557496 PGPEP1Q9NXJ5 209 aa6.66□□□□□ -1.34
FOXN3-216ENST00000557496 ATP1B4Q9UN42 357 aaPredicted RBP6.66□□□□□ -1.34
FOXN3-216ENST00000557496 RFC5P40937 340 aa6.65□□□□□ -1.34
FOXN3-216ENST00000557496 DHX9Q08211 1270 aaKnown RBP6.65□□□□□ -1.34
FOXN3-216ENST00000557496 CBLBQ13191 982 aa6.65□□□□□ -1.34
FOXN3-216ENST00000557496 INTS6LQ5JSJ4 861 aaKnown RBP6.65□□□□□ -1.34
FOXN3-216ENST00000557496 ZSCAN1Q8NBB4 408 aa6.65□□□□□ -1.34
FOXN3-216ENST00000557496 ADAM32Q8TC27 787 aa6.65□□□□□ -1.34
FOXN3-216ENST00000557496 GOPCQ9HD26 462 aa6.65□□□□□ -1.34
FOXN3-216ENST00000557496 TTLL8A6PVC2 850 aa6.64□□□□□ -1.35
FOXN3-216ENST00000557496 PPFIA3O75145 1194 aa6.64□□□□□ -1.35
FOXN3-216ENST00000557496 SPINT1O43278 529 aa6.63□□□□□ -1.35
FOXN3-216ENST00000557496 SLC24A1O60721 1099 aa6.63□□□□□ -1.35
FOXN3-216ENST00000557496 NBPF20Q3BBV1 942 aa6.63□□□□□ -1.35
FOXN3-216ENST00000557496 PNMA1Q8ND90 353 aa6.63□□□□□ -1.35
FOXN3-216ENST00000557496 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
FOXN3-216ENST00000557496 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.62□□□□□ -1.358e-7■■■□□ 14.6
FOXN3-216ENST00000557496 TRIM34Q9BYJ4 488 aa6.62□□□□□ -1.35
FOXN3-216ENST00000557496 PTSQ03393 145 aa6.6□□□□□ -1.35
FOXN3-216ENST00000557496 PCMTD1Q96MG8 357 aaPredicted RBP6.6□□□□□ -1.35
FOXN3-216ENST00000557496 ESPNB1AK53 854 aa6.59□□□□□ -1.35
FOXN3-216ENST00000557496 DZIP3Q86Y13 1208 aaKnown RBP6.59□□□□□ -1.35
FOXN3-216ENST00000557496 ZNF784Q8NCA9 323 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-216ENST00000557496 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
FOXN3-216ENST00000557496 TMPRSS4Q9NRS4 437 aa6.59□□□□□ -1.35
FOXN3-216ENST00000557496 FIGNL2A6NMB9 653 aa6.58□□□□□ -1.36
FOXN3-216ENST00000557496 ERVH48-1M5A8F1 160 aa6.58□□□□□ -1.36
FOXN3-216ENST00000557496 CTSOP43234 321 aaPredicted RBP6.58□□□□□ -1.36
FOXN3-216ENST00000557496 RELBQ01201 579 aa6.58□□□□□ -1.36
FOXN3-216ENST00000557496 NEUROD2Q15784 382 aa6.58□□□□□ -1.36
FOXN3-216ENST00000557496 TMEM259Q4ZIN3 620 aa6.58□□□□□ -1.36
FOXN3-216ENST00000557496 GJD4Q96KN9 370 aaPredicted RBP6.58□□□□□ -1.36
FOXN3-216ENST00000557496 INSM2Q96T92 566 aaPredicted RBP6.58□□□□□ -1.36
FOXN3-216ENST00000557496 LILRA1O75019 489 aa6.57□□□□□ -1.36
FOXN3-216ENST00000557496 ADH1AP07327 375 aa6.57□□□□□ -1.36
FOXN3-216ENST00000557496 RAB15P59190 212 aa6.57□□□□□ -1.36
FOXN3-216ENST00000557496 SLC35F4A4IF30 521 aa6.56□□□□□ -1.36
FOXN3-216ENST00000557496 ADD1P35611 737 aaKnown RBP6.56□□□□□ -1.36
FOXN3-216ENST00000557496 KRT76Q01546 638 aa6.56□□□□□ -1.36
FOXN3-216ENST00000557496 SEPT12Q8IYM1 358 aa6.56□□□□□ -1.36
FOXN3-216ENST00000557496 CCDC155Q8N6L0 562 aa6.56□□□□□ -1.36
FOXN3-216ENST00000557496 GPR161Q8N6U8 529 aaKnown RBP6.56□□□□□ -1.36
FOXN3-216ENST00000557496 KDF1Q8NAX2 398 aaPredicted RBP6.56□□□□□ -1.36
FOXN3-216ENST00000557496 IL27Q8NEV9 243 aa6.56□□□□□ -1.36
FOXN3-216ENST00000557496 RNF217Q8TC41 542 aa6.56□□□□□ -1.36
FOXN3-216ENST00000557496 ZBBXA8MT70 800 aa6.55□□□□□ -1.36
FOXN3-216ENST00000557496 BRPF1P55201 1214 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-216ENST00000557496 NANOS1Q8WY41 292 aaKnown RBP6.55□□□□□ -1.36
FOXN3-216ENST00000557496 ZNF395Q9H8N7 513 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-216ENST00000557496 POLMQ9NP87 494 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-216ENST00000557496 FBXO45P0C2W1 286 aa6.54□□□□□ -1.36
FOXN3-216ENST00000557496 FOXD4L5Q5VV16 416 aaPredicted RBP6.54□□□□□ -1.36
FOXN3-216ENST00000557496 SENP3-EIF4A1A0A087X0R7 540 aa6.53□□□□□ -1.36
FOXN3-216ENST00000557496 ITGA6P23229 1130 aa6.53□□□□□ -1.36
FOXN3-216ENST00000557496 PTGIRP43119 386 aa6.53□□□□□ -1.36
FOXN3-216ENST00000557496 CYLDQ9NQC7 956 aa6.53□□□□□ -1.36
FOXN3-216ENST00000557496 SOCS7O14512 581 aa6.52□□□□□ -1.37
FOXN3-216ENST00000557496 GPR37L1O60883 481 aa6.52□□□□□ -1.37
FOXN3-216ENST00000557496 PCDHB9Q9Y5E1 797 aa6.52□□□□□ -1.37
FOXN3-216ENST00000557496 GIGYF1O75420 1035 aaPredicted RBP6.51□□□□□ -1.37
FOXN3-216ENST00000557496 RNFT1Q5M7Z0 435 aa6.51□□□□□ -1.37
FOXN3-216ENST00000557496 CNTNAP3BQ96NU0 1288 aa6.51□□□□□ -1.37
FOXN3-216ENST00000557496 COL25A1Q9BXS0 654 aaPredicted RBP6.51□□□□□ -1.37
FOXN3-216ENST00000557496 CNTNAP3Q9BZ76 1288 aa6.51□□□□□ -1.37
FOXN3-216ENST00000557496 MTMR14Q8NCE2 650 aa6.5□□□□□ -1.37
FOXN3-216ENST00000557496 BANK1Q8NDB2 785 aa6.5□□□□□ -1.37
FOXN3-216ENST00000557496 TRIM52Q96A61 297 aa6.5□□□□□ -1.37
FOXN3-216ENST00000557496 CDC14CA4D256 554 aa6.49□□□□□ -1.37
FOXN3-216ENST00000557496 ATP5J2-PTCD1G3V325 749 aa6.49□□□□□ -1.37
FOXN3-216ENST00000557496 ERVK-9P63128 1117 aa6.49□□□□□ -1.37
FOXN3-216ENST00000557496 NR1H3Q13133 447 aa6.49□□□□□ -1.37
FOXN3-216ENST00000557496 LYSMD3Q7Z3D4 306 aa6.49□□□□□ -1.37
FOXN3-216ENST00000557496 CCDC125Q86Z20 511 aa6.49□□□□□ -1.37
FOXN3-216ENST00000557496 RNF144AP50876 292 aaPredicted RBP6.48□□□□□ -1.37
FOXN3-216ENST00000557496 SV2AQ7L0J3 742 aa6.48□□□□□ -1.37
FOXN3-216ENST00000557496 VWA5B2Q8N398 1253 aa6.48□□□□□ -1.37
FOXN3-216ENST00000557496 NDUFB9Q9Y6M9 179 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 383.7 ms