RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 TRIM37O94972 964 aa31.77■■■□□ 2.68
PABPN1-207ENST00000556821 TMF1P82094 1093 aa31.77■■■□□ 2.68
PABPN1-207ENST00000556821 FAM196AQ6ZSG2 479 aa31.77■■■□□ 2.68
PABPN1-207ENST00000556821 HDGFL2Q7Z4V5 671 aaPredicted RBP31.77■■■□□ 2.68
PABPN1-207ENST00000556821 USP31Q70CQ4 1352 aa31.77■■■□□ 2.68
PABPN1-207ENST00000556821 PARD3Q8TEW0 1356 aa31.77■■■□□ 2.68
PABPN1-207ENST00000556821 COL5A2P05997 1499 aaPredicted RBP31.77■■■□□ 2.68
PABPN1-207ENST00000556821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.76■■■□□ 2.67
PABPN1-207ENST00000556821 TERF2IPQ9NYB0 399 aa31.76■■■□□ 2.67
PABPN1-207ENST00000556821 SPATA31A1Q5TZJ5 1347 aa31.74■■■□□ 2.67
PABPN1-207ENST00000556821 NME9Q86XW9 330 aa31.73■■■□□ 2.67
PABPN1-207ENST00000556821 STRN4Q9NRL3 753 aa31.73■■■□□ 2.67
PABPN1-207ENST00000556821 AATKQ6ZMQ8 1374 aa31.72■■■□□ 2.67
PABPN1-207ENST00000556821 OVOS2A0A0J9YW53 1432 aa31.72■■■□□ 2.67
PABPN1-207ENST00000556821 OVOS2Q6IE36 1432 aa31.72■■■□□ 2.67
PABPN1-207ENST00000556821 ANKRD36BQ8N2N9 1353 aa31.71■■■□□ 2.67
PABPN1-207ENST00000556821 APBA3O96018 575 aa31.71■■■□□ 2.67
PABPN1-207ENST00000556821 TNS1Q9HBL0 1735 aaKnown RBP31.71■■■□□ 2.67
PABPN1-207ENST00000556821 ABCC6O95255 1503 aa31.7■■■□□ 2.67
PABPN1-207ENST00000556821 PARP4Q9UKK3 1724 aaKnown RBP31.69■■■□□ 2.66
PABPN1-207ENST00000556821 KCNH5Q8NCM2 988 aa31.68■■■□□ 2.66
PABPN1-207ENST00000556821 ZBTB7CA1YPR0 619 aa31.67■■■□□ 2.66
PABPN1-207ENST00000556821 ARHGEF25Q86VW2 580 aa31.67■■■□□ 2.66
PABPN1-207ENST00000556821 SOX12O15370 315 aa31.66■■■□□ 2.66
PABPN1-207ENST00000556821 LARP1Q6PKG0 1096 aaKnown RBP31.66■■■□□ 2.66
PABPN1-207ENST00000556821 EVA1CP58658 441 aa31.64■■■□□ 2.66
PABPN1-207ENST00000556821 CDCA8Q53HL2 280 aa31.64■■■□□ 2.66
PABPN1-207ENST00000556821 CRB1P82279 1406 aa31.62■■■□□ 2.65
PABPN1-207ENST00000556821 AXIN2Q9Y2T1 843 aa31.62■■■□□ 2.65
PABPN1-207ENST00000556821 NBPF14Q5TI25 921 aa31.61■■■□□ 2.65
PABPN1-207ENST00000556821 BARGINQ6ZT62 677 aa31.61■■■□□ 2.65
PABPN1-207ENST00000556821 HSPA5P11021 654 aaKnown RBP31.6■■■□□ 2.65
PABPN1-207ENST00000556821 EIF4G2P78344 907 aaKnown RBP eCLIP31.6■■■□□ 2.653e-7■■□□□ 12.5
PABPN1-207ENST00000556821 SPON1Q9HCB6 807 aa31.6■■■□□ 2.65
PABPN1-207ENST00000556821 LRRC37A3O60309 1634 aa31.6■■■□□ 2.65
PABPN1-207ENST00000556821 KCNQ2O43526 872 aa31.59■■■□□ 2.65
PABPN1-207ENST00000556821 USP35Q9P2H5 1018 aa31.59■■■□□ 2.65
PABPN1-207ENST00000556821 ANKRD26Q9UPS8 1709 aa31.55■■■□□ 2.64
PABPN1-207ENST00000556821 FAM208AQ9UK61 1670 aaKnown RBP31.55■■■□□ 2.64
PABPN1-207ENST00000556821 RGPD2P0DJD1 1756 aa31.55■■■□□ 2.64
PABPN1-207ENST00000556821 WDR17Q8IZU2 1322 aa31.54■■■□□ 2.64
PABPN1-207ENST00000556821 TCP11L2Q8N4U5 519 aa31.54■■■□□ 2.64
PABPN1-207ENST00000556821 PDE3BQ13370 1112 aa31.52■■■□□ 2.64
PABPN1-207ENST00000556821 SBF2Q86WG5 1849 aa31.52■■■□□ 2.64
PABPN1-207ENST00000556821 PPP1R1BQ9UD71 204 aaPredicted RBP31.51■■■□□ 2.63
PABPN1-207ENST00000556821 PEAK1Q9H792 1746 aa31.5■■■□□ 2.63
PABPN1-207ENST00000556821 THRAP3Q9Y2W1 955 aaKnown RBP31.5■■■□□ 2.63
PABPN1-207ENST00000556821 RREB1Q92766 1687 aa31.5■■■□□ 2.63
PABPN1-207ENST00000556821 CARD14Q9BXL6 1004 aa31.49■■■□□ 2.63
PABPN1-207ENST00000556821 NSD3Q9BZ95 1437 aa31.49■■■□□ 2.63
PABPN1-207ENST00000556821 DCAF8L1A6NGE4 600 aa31.48■■■□□ 2.63
PABPN1-207ENST00000556821 FYB1O15117 783 aa31.48■■■□□ 2.63
PABPN1-207ENST00000556821 TOM1L2Q6ZVM7 507 aa31.48■■■□□ 2.63
PABPN1-207ENST00000556821 COG3Q96JB2 828 aa31.48■■■□□ 2.63
PABPN1-207ENST00000556821 MAP2P11137 1827 aaKnown RBP31.47■■■□□ 2.63
PABPN1-207ENST00000556821 NUP188Q5SRE5 1749 aa31.45■■■□□ 2.63
PABPN1-207ENST00000556821 GGNBP2Q9H3C7 697 aa31.45■■■□□ 2.63
PABPN1-207ENST00000556821 ERBB3P21860 1342 aa31.44■■■□□ 2.62
PABPN1-207ENST00000556821 FBLN1P23142 703 aa31.42■■■□□ 2.62
PABPN1-207ENST00000556821 POLR3GLQ9BT43 218 aa31.42■■■□□ 2.62
PABPN1-207ENST00000556821 C11orf95C9JLR9 678 aaPredicted RBP31.41■■■□□ 2.62
PABPN1-207ENST00000556821 CSB-PGBD3P0DP91 1061 aa31.41■■■□□ 2.62
PABPN1-207ENST00000556821 ZNF784Q8NCA9 323 aaPredicted RBP31.41■■■□□ 2.62
PABPN1-207ENST00000556821 MAP3K19Q56UN5 1328 aa31.41■■■□□ 2.62
PABPN1-207ENST00000556821 PLSCR1O15162 318 aa31.4■■■□□ 2.62
PABPN1-207ENST00000556821 CARD10Q9BWT7 1032 aa31.4■■■□□ 2.62
PABPN1-207ENST00000556821 CCDC7Q96M83 1385 aa31.38■■■□□ 2.61
PABPN1-207ENST00000556821 IP6K1Q92551 441 aa31.37■■■□□ 2.61
PABPN1-207ENST00000556821 ANO8Q9HCE9 1232 aaPredicted RBP31.36■■■□□ 2.61
PABPN1-207ENST00000556821 ANKRD24Q8TF21 1146 aa31.35■■■□□ 2.61
PABPN1-207ENST00000556821 RTL1A6NKG5 1358 aa31.34■■■□□ 2.61
PABPN1-207ENST00000556821 PTGER2P43116 358 aa31.33■■■□□ 2.61
PABPN1-207ENST00000556821 PDGFDQ9GZP0 370 aaPredicted RBP31.33■■■□□ 2.61
PABPN1-207ENST00000556821 HOXC9P31274 260 aa31.32■■■□□ 2.6
PABPN1-207ENST00000556821 RRS1Q15050 365 aaKnown RBP31.32■■■□□ 2.6
PABPN1-207ENST00000556821 PROM2Q8N271 834 aa31.32■■■□□ 2.6
PABPN1-207ENST00000556821 SHANK3Q9BYB0 1731 aa31.32■■■□□ 2.6
PABPN1-207ENST00000556821 CDCA7Q9BWT1 371 aaPredicted RBP31.3■■■□□ 2.6
PABPN1-207ENST00000556821 NLRP2Q9NX02 1062 aa31.3■■■□□ 2.6
PABPN1-207ENST00000556821 OVOS2A0A0G2JMS6 1433 aa31.3■■■□□ 2.6
PABPN1-207ENST00000556821 TNS2Q63HR2 1409 aa31.3■■■□□ 2.6
PABPN1-207ENST00000556821 CGNL1Q0VF96 1302 aa31.29■■■□□ 2.6
PABPN1-207ENST00000556821 DDB1Q16531 1140 aa31.29■■■□□ 2.6
PABPN1-207ENST00000556821 AMPHP49418 695 aa31.28■■■□□ 2.6
PABPN1-207ENST00000556821 KIF7Q2M1P5 1343 aa31.27■■■□□ 2.6
PABPN1-207ENST00000556821 PTF1AQ7RTS3 328 aa31.27■■■□□ 2.6
PABPN1-207ENST00000556821 PANK3Q9H999 370 aa31.27■■■□□ 2.6
PABPN1-207ENST00000556821 RGPD3A6NKT7 1758 aaPredicted RBP31.26■■■□□ 2.59
PABPN1-207ENST00000556821 RGPD4Q7Z3J3 1758 aa31.26■■■□□ 2.59
PABPN1-207ENST00000556821 KAT6BQ8WYB5 2073 aa31.26■■■□□ 2.59
PABPN1-207ENST00000556821 LTV1Q96GA3 475 aaPredicted RBP31.25■■■□□ 2.59
PABPN1-207ENST00000556821 BCL11BQ9C0K0 894 aaPredicted RBP31.25■■■□□ 2.59
PABPN1-207ENST00000556821 KIF24Q5T7B8 1368 aa31.24■■■□□ 2.59
PABPN1-207ENST00000556821 ZBTB7AO95365 584 aa31.23■■■□□ 2.59
PABPN1-207ENST00000556821 NHSQ6T4R5 1651 aa31.22■■■□□ 2.59
PABPN1-207ENST00000556821 FLT4P35916 1363 aa31.22■■■□□ 2.59
PABPN1-207ENST00000556821 C1QTNF8P60827 252 aa31.22■■■□□ 2.59
PABPN1-207ENST00000556821 MARCH10Q8NA82 808 aaPredicted RBP31.22■■■□□ 2.59
PABPN1-207ENST00000556821 SYT17Q9BSW7 474 aa31.22■■■□□ 2.59
PABPN1-207ENST00000556821 CASZ1Q86V15 1759 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms