RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 SOX12O15370 315 aa16.05■□□□□ 0.16
APEX1-212ENST00000556054 HSPA1LP34931 641 aa16.05■□□□□ 0.16
APEX1-212ENST00000556054 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
APEX1-212ENST00000556054 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
APEX1-212ENST00000556054 IL13P35225 146 aa16.04■□□□□ 0.16
APEX1-212ENST00000556054 LMO7Q8WWI1 1683 aa16.03■□□□□ 0.16
APEX1-212ENST00000556054 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
APEX1-212ENST00000556054 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
APEX1-212ENST00000556054 HSP90AB2PQ58FF8 381 aa16.03■□□□□ 0.16
APEX1-212ENST00000556054 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
APEX1-212ENST00000556054 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
APEX1-212ENST00000556054 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
APEX1-212ENST00000556054 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
APEX1-212ENST00000556054 RGPD5Q99666 1765 aa16.01■□□□□ 0.15
APEX1-212ENST00000556054 EIF4A2Q14240 407 aaKnown RBP16.01■□□□□ 0.15
APEX1-212ENST00000556054 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
APEX1-212ENST00000556054 PNNQ9H307 717 aaKnown RBP16■□□□□ 0.15
APEX1-212ENST00000556054 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
APEX1-212ENST00000556054 AXIN2Q9Y2T1 843 aa15.99■□□□□ 0.15
APEX1-212ENST00000556054 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
APEX1-212ENST00000556054 FCHSD2O94868 740 aa15.98■□□□□ 0.15
APEX1-212ENST00000556054 NCAPD2Q15021 1401 aa15.98■□□□□ 0.15
APEX1-212ENST00000556054 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
APEX1-212ENST00000556054 NWD2Q9ULI1 1742 aa15.98■□□□□ 0.15
APEX1-212ENST00000556054 CAMTA1Q9Y6Y1 1673 aa15.98■□□□□ 0.15
APEX1-212ENST00000556054 ERBB3P21860 1342 aa15.97■□□□□ 0.15
APEX1-212ENST00000556054 IGSF1Q8N6C5 1336 aa15.97■□□□□ 0.15
APEX1-212ENST00000556054 KDRP35968 1356 aa15.97■□□□□ 0.15
APEX1-212ENST00000556054 PLEKHG2Q9H7P9 1386 aa15.97■□□□□ 0.15
APEX1-212ENST00000556054 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
APEX1-212ENST00000556054 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
APEX1-212ENST00000556054 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
APEX1-212ENST00000556054 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
APEX1-212ENST00000556054 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
APEX1-212ENST00000556054 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
APEX1-212ENST00000556054 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
APEX1-212ENST00000556054 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
APEX1-212ENST00000556054 EYA1Q99502 592 aa15.95■□□□□ 0.14
APEX1-212ENST00000556054 COL5A2P05997 1499 aaPredicted RBP15.95■□□□□ 0.14
APEX1-212ENST00000556054 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
APEX1-212ENST00000556054 PLCH1Q4KWH8 1693 aa15.94■□□□□ 0.14
APEX1-212ENST00000556054 SLIT2O94813 1529 aa15.94■□□□□ 0.14
APEX1-212ENST00000556054 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
APEX1-212ENST00000556054 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
APEX1-212ENST00000556054 RGPD2P0DJD1 1756 aa15.92■□□□□ 0.14
APEX1-212ENST00000556054 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
APEX1-212ENST00000556054 NUTM2BA6NNL0 878 aaPredicted RBP15.92■□□□□ 0.14
APEX1-212ENST00000556054 NUTM2EB1AL46 878 aaPredicted RBP15.92■□□□□ 0.14
APEX1-212ENST00000556054 NUTM2AQ8IVF1 878 aaPredicted RBP15.92■□□□□ 0.14
APEX1-212ENST00000556054 RUNDC1Q96C34 613 aa15.92■□□□□ 0.14
APEX1-212ENST00000556054 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
APEX1-212ENST00000556054 LRP6O75581 1613 aa15.92■□□□□ 0.14
APEX1-212ENST00000556054 ADAMTS2O95450 1211 aa15.91■□□□□ 0.14
APEX1-212ENST00000556054 NBPF6Q5VWK0 638 aa15.91■□□□□ 0.14
APEX1-212ENST00000556054 FNBP4Q8N3X1 1017 aaPredicted RBP15.91■□□□□ 0.14
APEX1-212ENST00000556054 NBPF4Q96M43 638 aa15.91■□□□□ 0.14
APEX1-212ENST00000556054 CARD10Q9BWT7 1032 aa15.91■□□□□ 0.14
APEX1-212ENST00000556054 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
APEX1-212ENST00000556054 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.91■□□□□ 0.14
APEX1-212ENST00000556054 SULT6B1Q6IMI4 303 aa15.9■□□□□ 0.14
APEX1-212ENST00000556054 LTV1Q96GA3 475 aaPredicted RBP15.9■□□□□ 0.14
APEX1-212ENST00000556054 CRB1P82279 1406 aa15.89■□□□□ 0.13
APEX1-212ENST00000556054 EVA1CP58658 441 aa15.89■□□□□ 0.13
APEX1-212ENST00000556054 NEFMP07197 916 aa15.88■□□□□ 0.13
APEX1-212ENST00000556054 CSB-PGBD3P0DP91 1061 aa15.88■□□□□ 0.13
APEX1-212ENST00000556054 HMOX1P09601 288 aa15.87■□□□□ 0.13
APEX1-212ENST00000556054 PRKAR2BP31323 418 aa15.87■□□□□ 0.13
APEX1-212ENST00000556054 NGLY1Q96IV0 654 aa15.87■□□□□ 0.13
APEX1-212ENST00000556054 NLRP2Q9NX02 1062 aa15.87■□□□□ 0.13
APEX1-212ENST00000556054 BCL9LQ86UU0 1499 aa15.86■□□□□ 0.13
APEX1-212ENST00000556054 TOM1L2Q6ZVM7 507 aa15.86■□□□□ 0.13
APEX1-212ENST00000556054 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
APEX1-212ENST00000556054 UNC5CLQ8IV45 518 aa15.86■□□□□ 0.13
APEX1-212ENST00000556054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.86■□□□□ 0.138e-8■□□□□ 10.1
APEX1-212ENST00000556054 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
APEX1-212ENST00000556054 CCDC27Q2M243 656 aa15.85■□□□□ 0.13
APEX1-212ENST00000556054 LARP1Q6PKG0 1096 aaKnown RBP15.85■□□□□ 0.13
APEX1-212ENST00000556054 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
APEX1-212ENST00000556054 THRAP3Q9Y2W1 955 aaKnown RBP15.85■□□□□ 0.13
APEX1-212ENST00000556054 VPS72Q15906 364 aa15.84■□□□□ 0.13
APEX1-212ENST00000556054 AMOTQ4VCS5 1084 aa15.84■□□□□ 0.13
APEX1-212ENST00000556054 C8orf37Q96NL8 207 aa15.84■□□□□ 0.13
APEX1-212ENST00000556054 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
APEX1-212ENST00000556054 PARP4Q9UKK3 1724 aaKnown RBP15.83■□□□□ 0.13
APEX1-212ENST00000556054 APAF1O14727 1248 aa15.83■□□□□ 0.12
APEX1-212ENST00000556054 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
APEX1-212ENST00000556054 NFE2L2Q16236 605 aa15.83■□□□□ 0.12
APEX1-212ENST00000556054 MEX3CQ5U5Q3 659 aaKnown RBP15.83■□□□□ 0.12
APEX1-212ENST00000556054 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
APEX1-212ENST00000556054 RAPGEF4Q8WZA2 1011 aa15.83■□□□□ 0.12
APEX1-212ENST00000556054 PHACTR3Q96KR7 559 aa15.83■□□□□ 0.12
APEX1-212ENST00000556054 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
APEX1-212ENST00000556054 CDCA7Q9BWT1 371 aaPredicted RBP15.83■□□□□ 0.12
APEX1-212ENST00000556054 ZBED9Q6R2W3 1325 aa15.83■□□□□ 0.12
APEX1-212ENST00000556054 TMPOP42166 694 aaKnown RBP15.82■□□□□ 0.12
APEX1-212ENST00000556054 GAS2L2Q8NHY3 880 aa15.82■□□□□ 0.12
APEX1-212ENST00000556054 SPATA31A5Q5VU36 1347 aa15.82■□□□□ 0.12
APEX1-212ENST00000556054 SPATA31A7Q8IWB4 1347 aa15.82■□□□□ 0.12
APEX1-212ENST00000556054 TATP17735 454 aaPredicted RBP15.81■□□□□ 0.12
APEX1-212ENST00000556054 PLEKHO1Q53GL0 409 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms