RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 VWA5B2Q8N398 1253 aa9.64□□□□□ -0.87
SRP54-207ENST00000555535 WHAMMQ8TF30 809 aa9.64□□□□□ -0.87
SRP54-207ENST00000555535 GPKOWQ92917 476 aaPredicted RBP eCLIP9.64□□□□□ -0.87
SRP54-207ENST00000555535 CDC14CA4D256 554 aa9.63□□□□□ -0.87
SRP54-207ENST00000555535 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
SRP54-207ENST00000555535 MSTNO14793 375 aa9.62□□□□□ -0.87
SRP54-207ENST00000555535 SH3BP5LQ7L8J4 393 aa9.62□□□□□ -0.87
SRP54-207ENST00000555535 PCDHB15Q9Y5E8 787 aa9.62□□□□□ -0.87
SRP54-207ENST00000555535 PHF20L1A8MW92 1017 aa9.61□□□□□ -0.87
SRP54-207ENST00000555535 SRSF11Q05519 484 aaKnown RBP9.61□□□□□ -0.87
SRP54-207ENST00000555535 DHX9Q08211 1270 aaKnown RBP9.61□□□□□ -0.87
SRP54-207ENST00000555535 XP32Q5T750 250 aa9.61□□□□□ -0.87
SRP54-207ENST00000555535 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
SRP54-207ENST00000555535 CDV3Q9UKY7 258 aaKnown RBP9.61□□□□□ -0.87
SRP54-207ENST00000555535 ADAMTS2O95450 1211 aa9.6□□□□□ -0.87
SRP54-207ENST00000555535 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
SRP54-207ENST00000555535 ADAM23O75077 832 aa9.58□□□□□ -0.88
SRP54-207ENST00000555535 RIC3Q7Z5B4 369 aa9.58□□□□□ -0.88
SRP54-207ENST00000555535 PER1O15534 1290 aaPredicted RBP9.57□□□□□ -0.88
SRP54-207ENST00000555535 CBLBQ13191 982 aa9.56□□□□□ -0.88
SRP54-207ENST00000555535 LYPD4Q6UWN0 246 aa9.56□□□□□ -0.88
SRP54-207ENST00000555535 HELBQ8NG08 1087 aaPredicted RBP9.56□□□□□ -0.88
SRP54-207ENST00000555535 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
SRP54-207ENST00000555535 TUSC1Q2TAM9 212 aa9.55□□□□□ -0.88
SRP54-207ENST00000555535 PLA2G4EQ3MJ16 856 aa9.55□□□□□ -0.88
SRP54-207ENST00000555535 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
SRP54-207ENST00000555535 PODNQ7Z5L7 613 aa9.55□□□□□ -0.88
SRP54-207ENST00000555535 BEND7Q8N7W2 519 aaPredicted RBP9.55□□□□□ -0.88
SRP54-207ENST00000555535 TSC1Q92574 1164 aa9.55□□□□□ -0.88
SRP54-207ENST00000555535 NUTM2BA6NNL0 878 aaPredicted RBP9.54□□□□□ -0.88
SRP54-207ENST00000555535 NUTM2EB1AL46 878 aaPredicted RBP9.54□□□□□ -0.88
SRP54-207ENST00000555535 CELA2BP08218 269 aaPredicted RBP9.54□□□□□ -0.88
SRP54-207ENST00000555535 NUTM2DQ5VT03 806 aaPredicted RBP9.54□□□□□ -0.88
SRP54-207ENST00000555535 NUTM2AQ8IVF1 878 aaPredicted RBP9.54□□□□□ -0.88
SRP54-207ENST00000555535 CABLES1Q8TDN4 633 aa9.54□□□□□ -0.88
SRP54-207ENST00000555535 BARGINQ6ZT62 677 aa9.53□□□□□ -0.88
SRP54-207ENST00000555535 GMCL1Q96IK5 515 aa9.53□□□□□ -0.88
SRP54-207ENST00000555535 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
SRP54-207ENST00000555535 CARD14Q9BXL6 1004 aa9.53□□□□□ -0.88
SRP54-207ENST00000555535 POLMQ9NP87 494 aaPredicted RBP9.53□□□□□ -0.88
SRP54-207ENST00000555535 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
SRP54-207ENST00000555535 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.89
SRP54-207ENST00000555535 DCAF5Q96JK2 942 aa9.52□□□□□ -0.89
SRP54-207ENST00000555535 GALNT6Q8NCL4 622 aa9.51□□□□□ -0.89
SRP54-207ENST00000555535 RNF217Q8TC41 542 aa9.51□□□□□ -0.89
SRP54-207ENST00000555535 KCTD15Q96SI1 283 aaPredicted RBP9.51□□□□□ -0.89
SRP54-207ENST00000555535 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
SRP54-207ENST00000555535 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
SRP54-207ENST00000555535 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
SRP54-207ENST00000555535 FOXR1Q6PIV2 292 aa9.5□□□□□ -0.89
SRP54-207ENST00000555535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
SRP54-207ENST00000555535 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
SRP54-207ENST00000555535 RELBQ01201 579 aa9.49□□□□□ -0.89
SRP54-207ENST00000555535 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
SRP54-207ENST00000555535 MBIPQ9NS73 344 aa9.49□□□□□ -0.89
SRP54-207ENST00000555535 LILRB3O75022 631 aa9.48□□□□□ -0.89
SRP54-207ENST00000555535 ARHGAP9Q9BRR9 750 aa9.48□□□□□ -0.89
SRP54-207ENST00000555535 LRRC4BQ9NT99 713 aa9.48□□□□□ -0.89
SRP54-207ENST00000555535 ZMYND10O75800 440 aa9.47□□□□□ -0.89
SRP54-207ENST00000555535 HAP1P54257 671 aaPredicted RBP9.47□□□□□ -0.89
SRP54-207ENST00000555535 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
SRP54-207ENST00000555535 GAS6Q14393 721 aa9.46□□□□□ -0.9
SRP54-207ENST00000555535 PARP9Q8IXQ6 854 aa9.46□□□□□ -0.9
SRP54-207ENST00000555535 ZC3H4Q9UPT8 1303 aaKnown RBP9.46□□□□□ -0.9
SRP54-207ENST00000555535 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
SRP54-207ENST00000555535 BCRP11274 1271 aa9.45□□□□□ -0.9
SRP54-207ENST00000555535 LYSMD3Q7Z3D4 306 aa9.45□□□□□ -0.9
SRP54-207ENST00000555535 ZBTB33Q86T24 672 aa9.45□□□□□ -0.9
SRP54-207ENST00000555535 NEDD1Q8NHV4 660 aa9.45□□□□□ -0.9
SRP54-207ENST00000555535 CNTNAP5Q8WYK1 1306 aa9.45□□□□□ -0.9
SRP54-207ENST00000555535 PROCP04070 461 aa9.44□□□□□ -0.9
SRP54-207ENST00000555535 QPCTQ16769 361 aa9.44□□□□□ -0.9
SRP54-207ENST00000555535 INTS6LQ5JSJ4 861 aaKnown RBP9.44□□□□□ -0.9
SRP54-207ENST00000555535 NBPF20Q3BBV1 942 aa9.43□□□□□ -0.9
SRP54-207ENST00000555535 ALYREFQ86V81 257 aaKnown RBP9.43□□□□□ -0.9
SRP54-207ENST00000555535 ZNF395Q9H8N7 513 aaPredicted RBP9.43□□□□□ -0.9
SRP54-207ENST00000555535 ADH1AP07327 375 aa9.42□□□□□ -0.9
SRP54-207ENST00000555535 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
SRP54-207ENST00000555535 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
SRP54-207ENST00000555535 LIMD1Q9UGP4 676 aa9.42□□□□□ -0.9
SRP54-207ENST00000555535 NSFL1CQ9UNZ2 370 aaKnown RBP9.42□□□□□ -0.9
SRP54-207ENST00000555535 GPSM3Q9Y4H4 160 aa9.42□□□□□ -0.9
SRP54-207ENST00000555535 IGF1RP08069 1367 aa9.41□□□□□ -0.9
SRP54-207ENST00000555535 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
SRP54-207ENST00000555535 ITGB2P05107 769 aa9.4□□□□□ -0.9
SRP54-207ENST00000555535 PTK2Q05397 1052 aa9.4□□□□□ -0.9
SRP54-207ENST00000555535 FOXD4L5Q5VV16 416 aaPredicted RBP9.4□□□□□ -0.9
SRP54-207ENST00000555535 KRTAP4-8Q9BYQ9 185 aa9.4□□□□□ -0.9
SRP54-207ENST00000555535 H7C1W4 665 aa9.39□□□□□ -0.91
SRP54-207ENST00000555535 PTGIRP43119 386 aa9.39□□□□□ -0.91
SRP54-207ENST00000555535 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
SRP54-207ENST00000555535 TRERF1Q96PN7 1200 aa9.39□□□□□ -0.91
SRP54-207ENST00000555535 CUEDC1Q9NWM3 386 aaPredicted RBP9.39□□□□□ -0.91
SRP54-207ENST00000555535 RNF144AP50876 292 aaPredicted RBP9.37□□□□□ -0.91
SRP54-207ENST00000555535 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
SRP54-207ENST00000555535 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
SRP54-207ENST00000555535 TRIM66O15016 1216 aa9.36□□□□□ -0.91
SRP54-207ENST00000555535 Q8N3U1 123 aa9.36□□□□□ -0.91
SRP54-207ENST00000555535 ZNF784Q8NCA9 323 aaPredicted RBP9.36□□□□□ -0.91
SRP54-207ENST00000555535 BAG6P46379 1132 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms