RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ZNF787Q6DD87 383 aa7.36□□□□□ -1.23
VTI1B-203ENST00000554636 EPS8L1Q8TE68 723 aa7.36□□□□□ -1.23
VTI1B-203ENST00000554636 GOPCQ9HD26 462 aa7.36□□□□□ -1.23
VTI1B-203ENST00000554636 BIVM-ERCC5R4GMW8 1640 aa7.36□□□□□ -1.23
VTI1B-203ENST00000554636 TDRD9Q8NDG6 1382 aaKnown RBP7.35□□□□□ -1.23
VTI1B-203ENST00000554636 ABCA5Q8WWZ7 1642 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 SYNJ1O43426 1573 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 POTECB2RU33 542 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 AVPP01185 164 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 ARMC2Q8NEN0 867 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 FAM174AQ8TBP5 190 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 ABCA10Q8WWZ4 1543 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 SNAPC4Q5SXM2 1469 aa7.35□□□□□ -1.23
VTI1B-203ENST00000554636 TOP2BQ02880 1626 aa7.34□□□□□ -1.23
VTI1B-203ENST00000554636 BPHLQ86WA6 291 aaPredicted RBP7.34□□□□□ -1.23
VTI1B-203ENST00000554636 WRNQ14191 1432 aaPredicted RBP eCLIP7.34□□□□□ -1.23
VTI1B-203ENST00000554636 PBRM1Q86U86 1689 aa7.33□□□□□ -1.24
VTI1B-203ENST00000554636 GRIN2BQ13224 1484 aa7.33□□□□□ -1.24
VTI1B-203ENST00000554636 MAGI1Q96QZ7 1491 aaPredicted RBP7.33□□□□□ -1.24
VTI1B-203ENST00000554636 FKBPLQ9UIM3 349 aa7.33□□□□□ -1.24
VTI1B-203ENST00000554636 RIMBP3CA6NJZ7 1639 aa7.32□□□□□ -1.24
VTI1B-203ENST00000554636 RIMBP3BA6NNM3 1639 aa7.32□□□□□ -1.24
VTI1B-203ENST00000554636 RIMBP3Q9UFD9 1639 aa7.32□□□□□ -1.24
VTI1B-203ENST00000554636 NNTQ13423 1086 aa7.32□□□□□ -1.24
VTI1B-203ENST00000554636 CTC1Q2NKJ3 1217 aa7.32□□□□□ -1.24
VTI1B-203ENST00000554636 GAPVD1Q14C86 1478 aa7.31□□□□□ -1.24
VTI1B-203ENST00000554636 SH3BP5LQ7L8J4 393 aa7.31□□□□□ -1.24
VTI1B-203ENST00000554636 CRIPAKQ8N1N5 446 aa7.31□□□□□ -1.24
VTI1B-203ENST00000554636 ADH1CP00326 375 aa7.3□□□□□ -1.24
VTI1B-203ENST00000554636 BMP1P13497 986 aa7.3□□□□□ -1.24
VTI1B-203ENST00000554636 SH3RF1Q7Z6J0 888 aa7.3□□□□□ -1.24
VTI1B-203ENST00000554636 ARHGAP9Q9BRR9 750 aa7.3□□□□□ -1.24
VTI1B-203ENST00000554636 GMPR2Q9P2T1 348 aaKnown RBP7.3□□□□□ -1.24
VTI1B-203ENST00000554636 ARHGEF11O15085 1522 aa7.3□□□□□ -1.24
VTI1B-203ENST00000554636 CLASP1Q7Z460 1538 aa7.3□□□□□ -1.24
VTI1B-203ENST00000554636 SYNJ2O15056 1496 aa7.3□□□□□ -1.24
VTI1B-203ENST00000554636 FSHRP23945 695 aa7.29□□□□□ -1.24
VTI1B-203ENST00000554636 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
VTI1B-203ENST00000554636 TMEM259Q4ZIN3 620 aa7.29□□□□□ -1.24
VTI1B-203ENST00000554636 VASH1Q7L8A9 365 aaPredicted RBP7.29□□□□□ -1.24
VTI1B-203ENST00000554636 ADAMTS12P58397 1594 aa7.29□□□□□ -1.24
VTI1B-203ENST00000554636 CAPN5O15484 640 aaPredicted RBP7.28□□□□□ -1.24
VTI1B-203ENST00000554636 ERFEQ4G0M1 354 aa7.28□□□□□ -1.24
VTI1B-203ENST00000554636 ZBTB33Q86T24 672 aa7.28□□□□□ -1.24
VTI1B-203ENST00000554636 GPKOWQ92917 476 aaPredicted RBP eCLIP7.28□□□□□ -1.24
VTI1B-203ENST00000554636 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
VTI1B-203ENST00000554636 ATP13A2Q9NQ11 1180 aa7.28□□□□□ -1.24
VTI1B-203ENST00000554636 NR3C2P08235 984 aa7.27□□□□□ -1.25
VTI1B-203ENST00000554636 WDR4P57081 412 aaKnown RBP7.27□□□□□ -1.25
VTI1B-203ENST00000554636 PDXDC2PQ6P474 469 aa7.27□□□□□ -1.25
VTI1B-203ENST00000554636 C1QTNF2Q9BXJ5 285 aa7.27□□□□□ -1.25
VTI1B-203ENST00000554636 C11orf95C9JLR9 678 aaPredicted RBP7.26□□□□□ -1.25
VTI1B-203ENST00000554636 PTK2Q05397 1052 aa7.26□□□□□ -1.25
VTI1B-203ENST00000554636 PNMA1Q8ND90 353 aa7.26□□□□□ -1.25
VTI1B-203ENST00000554636 SLC10A4Q96EP9 437 aa7.26□□□□□ -1.25
VTI1B-203ENST00000554636 CDK15Q96Q40 435 aa7.26□□□□□ -1.25
VTI1B-203ENST00000554636 OCSTAMPQ9BR26 566 aa7.26□□□□□ -1.25
VTI1B-203ENST00000554636 ARAP1Q96P48 1450 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 TIMP2P16035 220 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 GRM5P41594 1212 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 MPNDQ8N594 471 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 ADAM32Q8TC27 787 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 CHMP7Q8WUX9 453 aaPredicted RBP7.25□□□□□ -1.25
VTI1B-203ENST00000554636 GJD4Q96KN9 370 aaPredicted RBP7.25□□□□□ -1.25
VTI1B-203ENST00000554636 ZFAND3Q9H8U3 227 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 SNRKQ9NRH2 765 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 ERICH3Q5RHP9 1530 aa7.25□□□□□ -1.25
VTI1B-203ENST00000554636 ZC3H4Q9UPT8 1303 aaKnown RBP7.25□□□□□ -1.25
VTI1B-203ENST00000554636 GRIN2AQ12879 1464 aa7.24□□□□□ -1.25
VTI1B-203ENST00000554636 ZIC2O95409 532 aaPredicted RBP7.24□□□□□ -1.25
VTI1B-203ENST00000554636 RAB15P59190 212 aa7.24□□□□□ -1.25
VTI1B-203ENST00000554636 NR5A1Q13285 461 aa7.24□□□□□ -1.25
VTI1B-203ENST00000554636 TRMT44Q8IYL2 757 aaKnown RBP7.24□□□□□ -1.25
VTI1B-203ENST00000554636 ITPKCQ96DU7 683 aa7.24□□□□□ -1.25
VTI1B-203ENST00000554636 CEP170Q5SW79 1584 aa7.24□□□□□ -1.25
VTI1B-203ENST00000554636 SNRPBP14678 240 aaKnown RBP7.23□□□□□ -1.25
VTI1B-203ENST00000554636 TRIM46Q7Z4K8 759 aa7.23□□□□□ -1.25
VTI1B-203ENST00000554636 MTMR14Q8NCE2 650 aa7.23□□□□□ -1.25
VTI1B-203ENST00000554636 FHAD1B1AJZ9 1412 aa7.23□□□□□ -1.25
VTI1B-203ENST00000554636 NUP160Q12769 1436 aa7.23□□□□□ -1.25
VTI1B-203ENST00000554636 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
VTI1B-203ENST00000554636 KCTD15Q96SI1 283 aaPredicted RBP7.22□□□□□ -1.25
VTI1B-203ENST00000554636 MAP4K5Q9Y4K4 846 aa7.22□□□□□ -1.25
VTI1B-203ENST00000554636 CCDC116Q8IYX3 515 aa7.21□□□□□ -1.26
VTI1B-203ENST00000554636 PURBQ96QR8 312 aaKnown RBP7.21□□□□□ -1.26
VTI1B-203ENST00000554636 SENP2Q9HC62 589 aa7.21□□□□□ -1.26
VTI1B-203ENST00000554636 FBXO45P0C2W1 286 aa7.2□□□□□ -1.26
VTI1B-203ENST00000554636 C6orf118Q5T5N4 469 aa7.2□□□□□ -1.26
VTI1B-203ENST00000554636 DZIP3Q86Y13 1208 aaKnown RBP7.2□□□□□ -1.26
VTI1B-203ENST00000554636 BANK1Q8NDB2 785 aa7.2□□□□□ -1.26
VTI1B-203ENST00000554636 TRIM47Q96LD4 638 aa7.2□□□□□ -1.26
VTI1B-203ENST00000554636 KLF16Q9BXK1 252 aaPredicted RBP7.2□□□□□ -1.26
VTI1B-203ENST00000554636 GPSM3Q9Y4H4 160 aa7.2□□□□□ -1.26
VTI1B-203ENST00000554636 PCDHB9Q9Y5E1 797 aa7.2□□□□□ -1.26
VTI1B-203ENST00000554636 NDUFB9Q9Y6M9 179 aa7.2□□□□□ -1.26
VTI1B-203ENST00000554636 SHROOM2Q13796 1616 aa7.19□□□□□ -1.26
VTI1B-203ENST00000554636 MRPL14Q6P1L8 145 aaKnown RBP7.19□□□□□ -1.26
VTI1B-203ENST00000554636 ZFP42Q96MM3 310 aa7.19□□□□□ -1.26
VTI1B-203ENST00000554636 ERCC6L2Q5T890 1561 aa7.19□□□□□ -1.26
VTI1B-203ENST00000554636 KIF27Q86VH2 1401 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms