RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 CAMTA1Q9Y6Y1 1673 aa12.82□□□□□ -0.36
CHD8-206ENST00000553870 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
CHD8-206ENST00000553870 NFAT5O94916 1531 aa12.82□□□□□ -0.36
CHD8-206ENST00000553870 ABCC6O95255 1503 aa12.82□□□□□ -0.36
CHD8-206ENST00000553870 ZBTB7CA1YPR0 619 aa12.81□□□□□ -0.36
CHD8-206ENST00000553870 IP6K1Q92551 441 aa12.81□□□□□ -0.36
CHD8-206ENST00000553870 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
CHD8-206ENST00000553870 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
CHD8-206ENST00000553870 SPATA31A1Q5TZJ5 1347 aa12.81□□□□□ -0.36
CHD8-206ENST00000553870 NSD2O96028 1365 aa12.81□□□□□ -0.36
CHD8-206ENST00000553870 LMO7Q8WWI1 1683 aa12.8□□□□□ -0.36
CHD8-206ENST00000553870 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
CHD8-206ENST00000553870 KIF24Q5T7B8 1368 aa12.8□□□□□ -0.36
CHD8-206ENST00000553870 NRAPQ86VF7 1730 aa12.79□□□□□ -0.36
CHD8-206ENST00000553870 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
CHD8-206ENST00000553870 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
CHD8-206ENST00000553870 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
CHD8-206ENST00000553870 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
CHD8-206ENST00000553870 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
CHD8-206ENST00000553870 AMPHP49418 695 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 TOM1L2Q6ZVM7 507 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 SEPT12Q8IYM1 358 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 COL18A1P39060 1754 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 RGS12O14924 1447 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 BLMP54132 1417 aaPredicted RBP12.78□□□□□ -0.36
CHD8-206ENST00000553870 CRB1P82279 1406 aa12.78□□□□□ -0.36
CHD8-206ENST00000553870 GLI3P10071 1580 aa12.77□□□□□ -0.36
CHD8-206ENST00000553870 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
CHD8-206ENST00000553870 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
CHD8-206ENST00000553870 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
CHD8-206ENST00000553870 RTL1A6NKG5 1358 aa12.77□□□□□ -0.37
CHD8-206ENST00000553870 HOXC9P31274 260 aa12.76□□□□□ -0.37
CHD8-206ENST00000553870 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
CHD8-206ENST00000553870 ERBB3P21860 1342 aa12.76□□□□□ -0.37
CHD8-206ENST00000553870 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
CHD8-206ENST00000553870 FBLN1P23142 703 aa12.75□□□□□ -0.37
CHD8-206ENST00000553870 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
CHD8-206ENST00000553870 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
CHD8-206ENST00000553870 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
CHD8-206ENST00000553870 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
CHD8-206ENST00000553870 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
CHD8-206ENST00000553870 INSRP06213 1382 aa12.73□□□□□ -0.37
CHD8-206ENST00000553870 FLT4P35916 1363 aa12.73□□□□□ -0.37
CHD8-206ENST00000553870 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
CHD8-206ENST00000553870 POLKQ9UBT6 870 aa12.73□□□□□ -0.37
CHD8-206ENST00000553870 LTN1O94822 1766 aa12.72□□□□□ -0.37
CHD8-206ENST00000553870 A0A0G2JS52 829 aa12.72□□□□□ -0.37
CHD8-206ENST00000553870 MYT1Q01538 1121 aa12.72□□□□□ -0.37
CHD8-206ENST00000553870 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
CHD8-206ENST00000553870 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
CHD8-206ENST00000553870 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
CHD8-206ENST00000553870 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
CHD8-206ENST00000553870 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.37
CHD8-206ENST00000553870 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHD8-206ENST00000553870 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
CHD8-206ENST00000553870 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
CHD8-206ENST00000553870 ANKRD26Q9UPS8 1709 aa12.69□□□□□ -0.38
CHD8-206ENST00000553870 EXOC5O00471 708 aa12.69□□□□□ -0.38
CHD8-206ENST00000553870 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
CHD8-206ENST00000553870 TNNT2P45379 298 aaPredicted RBP12.69□□□□□ -0.38
CHD8-206ENST00000553870 DDB1Q16531 1140 aa12.69□□□□□ -0.38
CHD8-206ENST00000553870 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
CHD8-206ENST00000553870 THSD7AQ9UPZ6 1657 aa12.68□□□□□ -0.38
CHD8-206ENST00000553870 IL2RBP14784 551 aa12.68□□□□□ -0.38
CHD8-206ENST00000553870 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
CHD8-206ENST00000553870 FAM196AQ6ZSG2 479 aa12.68□□□□□ -0.38
CHD8-206ENST00000553870 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
CHD8-206ENST00000553870 NBPF6Q5VWK0 638 aa12.67□□□□□ -0.38
CHD8-206ENST00000553870 NBPF4Q96M43 638 aa12.67□□□□□ -0.38
CHD8-206ENST00000553870 DISP2A7MBM2 1401 aa12.67□□□□□ -0.38
CHD8-206ENST00000553870 FAM208AQ9UK61 1670 aaKnown RBP12.66□□□□□ -0.38
CHD8-206ENST00000553870 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.39
CHD8-206ENST00000553870 MTHFSP49914 203 aa12.64□□□□□ -0.39
CHD8-206ENST00000553870 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
CHD8-206ENST00000553870 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
CHD8-206ENST00000553870 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
CHD8-206ENST00000553870 SF3B2Q13435 895 aaKnown RBP12.63□□□□□ -0.39
CHD8-206ENST00000553870 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
CHD8-206ENST00000553870 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
CHD8-206ENST00000553870 EYA1Q99502 592 aa12.63□□□□□ -0.39
CHD8-206ENST00000553870 BCL9O00512 1426 aa12.62□□□□□ -0.39
CHD8-206ENST00000553870 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
CHD8-206ENST00000553870 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
CHD8-206ENST00000553870 TATP17735 454 aaPredicted RBP12.62□□□□□ -0.39
CHD8-206ENST00000553870 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
CHD8-206ENST00000553870 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
CHD8-206ENST00000553870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.393e-7■□□□□ 9.7
CHD8-206ENST00000553870 OVOS2A0A0G2JMS6 1433 aa12.61□□□□□ -0.39
CHD8-206ENST00000553870 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
CHD8-206ENST00000553870 IL13P35225 146 aa12.6□□□□□ -0.39
CHD8-206ENST00000553870 RALBP1Q15311 655 aa12.6□□□□□ -0.39
CHD8-206ENST00000553870 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
CHD8-206ENST00000553870 TNS2Q63HR2 1409 aa12.6□□□□□ -0.39
CHD8-206ENST00000553870 IGSF1Q8N6C5 1336 aa12.6□□□□□ -0.39
CHD8-206ENST00000553870 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
CHD8-206ENST00000553870 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
CHD8-206ENST00000553870 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
CHD8-206ENST00000553870 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms