RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 LTN1O94822 1766 aa28.32■■■□□ 2.12
FOXA1-203ENST00000553751 EP400Q96L91 3159 aa28.31■■■□□ 2.12
FOXA1-203ENST00000553751 KIF20BQ96Q89 1820 aa28.29■■■□□ 2.12
FOXA1-203ENST00000553751 RGPD5Q99666 1765 aa28.29■■■□□ 2.12
FOXA1-203ENST00000553751 CRB1P82279 1406 aa28.29■■■□□ 2.12
FOXA1-203ENST00000553751 CARD14Q9BXL6 1004 aa28.29■■■□□ 2.12
FOXA1-203ENST00000553751 NSD3Q9BZ95 1437 aa28.28■■■□□ 2.12
FOXA1-203ENST00000553751 A0A0G2JS52 829 aa28.28■■■□□ 2.12
FOXA1-203ENST00000553751 MYT1Q01538 1121 aa28.28■■■□□ 2.12
FOXA1-203ENST00000553751 COG3Q96JB2 828 aa28.28■■■□□ 2.12
FOXA1-203ENST00000553751 POLR3GLQ9BT43 218 aa28.28■■■□□ 2.12
FOXA1-203ENST00000553751 FYB1O15117 783 aa28.27■■■□□ 2.12
FOXA1-203ENST00000553751 USP35Q9P2H5 1018 aa28.27■■■□□ 2.12
FOXA1-203ENST00000553751 C11orf95C9JLR9 678 aaPredicted RBP28.26■■■□□ 2.11
FOXA1-203ENST00000553751 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
FOXA1-203ENST00000553751 BARGINQ6ZT62 677 aa28.25■■■□□ 2.11
FOXA1-203ENST00000553751 KRT27Q7Z3Y8 459 aa28.25■■■□□ 2.11
FOXA1-203ENST00000553751 TCP11L2Q8N4U5 519 aa28.24■■■□□ 2.11
FOXA1-203ENST00000553751 GGNBP2Q9H3C7 697 aa28.24■■■□□ 2.11
FOXA1-203ENST00000553751 THRAP3Q9Y2W1 955 aaKnown RBP28.22■■■□□ 2.11
FOXA1-203ENST00000553751 TOM1L2Q6ZVM7 507 aa28.2■■■□□ 2.1
FOXA1-203ENST00000553751 WNK3Q9BYP7 1800 aa28.19■■■□□ 2.1
FOXA1-203ENST00000553751 ERBB3P21860 1342 aa28.18■■■□□ 2.1
FOXA1-203ENST00000553751 PARP4Q9UKK3 1724 aaKnown RBP28.18■■■□□ 2.1
FOXA1-203ENST00000553751 BLMP54132 1417 aaPredicted RBP28.18■■■□□ 2.1
FOXA1-203ENST00000553751 MAP3K19Q56UN5 1328 aa28.18■■■□□ 2.1
FOXA1-203ENST00000553751 FBLN1P23142 703 aa28.17■■■□□ 2.1
FOXA1-203ENST00000553751 KIF7Q2M1P5 1343 aa28.17■■■□□ 2.1
FOXA1-203ENST00000553751 CSB-PGBD3P0DP91 1061 aa28.16■■■□□ 2.1
FOXA1-203ENST00000553751 CGNL1Q0VF96 1302 aa28.15■■■□□ 2.1
FOXA1-203ENST00000553751 IP6K1Q92551 441 aa28.14■■■□□ 2.1
FOXA1-203ENST00000553751 CARD10Q9BWT7 1032 aa28.14■■■□□ 2.1
FOXA1-203ENST00000553751 LRRC37A3O60309 1634 aa28.14■■■□□ 2.09
FOXA1-203ENST00000553751 PANK3Q9H999 370 aa28.13■■■□□ 2.09
FOXA1-203ENST00000553751 RTL1A6NKG5 1358 aa28.12■■■□□ 2.09
FOXA1-203ENST00000553751 FAM182BQ5T319 152 aa28.12■■■□□ 2.09
FOXA1-203ENST00000553751 ANKRD24Q8TF21 1146 aa28.12■■■□□ 2.09
FOXA1-203ENST00000553751 DISP2A7MBM2 1401 aa28.11■■■□□ 2.09
FOXA1-203ENST00000553751 RRS1Q15050 365 aaKnown RBP28.11■■■□□ 2.09
FOXA1-203ENST00000553751 CCDC125Q86Z20 511 aa28.11■■■□□ 2.09
FOXA1-203ENST00000553751 CCDC7Q96M83 1385 aa28.11■■■□□ 2.09
FOXA1-203ENST00000553751 ANKRD26Q9UPS8 1709 aa28.1■■■□□ 2.09
FOXA1-203ENST00000553751 HOXC9P31274 260 aa28.1■■■□□ 2.09
FOXA1-203ENST00000553751 FAM208AQ9UK61 1670 aaKnown RBP28.1■■■□□ 2.09
FOXA1-203ENST00000553751 PEAK1Q9H792 1746 aa28.09■■■□□ 2.09
FOXA1-203ENST00000553751 AMPHP49418 695 aa28.08■■■□□ 2.09
FOXA1-203ENST00000553751 NLRP2Q9NX02 1062 aa28.07■■■□□ 2.08
FOXA1-203ENST00000553751 PDE3BQ13370 1112 aa28.06■■■□□ 2.08
FOXA1-203ENST00000553751 CDCA7Q9BWT1 371 aaPredicted RBP28.06■■■□□ 2.08
FOXA1-203ENST00000553751 KIF24Q5T7B8 1368 aa28.04■■■□□ 2.08
FOXA1-203ENST00000553751 RGPD1P0DJD0 1748 aa28.04■■■□□ 2.08
FOXA1-203ENST00000553751 LTV1Q96GA3 475 aaPredicted RBP28.03■■■□□ 2.08
FOXA1-203ENST00000553751 NSD2O96028 1365 aa28.02■■■□□ 2.08
FOXA1-203ENST00000553751 FLT4P35916 1363 aa28.02■■■□□ 2.08
FOXA1-203ENST00000553751 DDB1Q16531 1140 aa28.02■■■□□ 2.08
FOXA1-203ENST00000553751 WASHC2AQ641Q2 1341 aa28.01■■■□□ 2.07
FOXA1-203ENST00000553751 FAM196AQ6ZSG2 479 aa28.01■■■□□ 2.07
FOXA1-203ENST00000553751 EMILIN1Q9Y6C2 1016 aa28.01■■■□□ 2.07
FOXA1-203ENST00000553751 TNS1Q9HBL0 1735 aaKnown RBP28.01■■■□□ 2.07
FOXA1-203ENST00000553751 TNS2Q63HR2 1409 aa28■■■□□ 2.07
FOXA1-203ENST00000553751 INSRP06213 1382 aa27.99■■■□□ 2.07
FOXA1-203ENST00000553751 OVOS2A0A0G2JMS6 1433 aa27.99■■■□□ 2.07
FOXA1-203ENST00000553751 RGPD2P0DJD1 1756 aa27.99■■■□□ 2.07
FOXA1-203ENST00000553751 SF3B2Q13435 895 aaKnown RBP27.98■■■□□ 2.07
FOXA1-203ENST00000553751 HSP90AB2PQ58FF8 381 aa27.98■■■□□ 2.07
FOXA1-203ENST00000553751 KNSTRNQ9Y448 316 aa27.97■■■□□ 2.07
FOXA1-203ENST00000553751 SMG6Q86US8 1419 aaKnown RBP27.97■■■□□ 2.07
FOXA1-203ENST00000553751 IL2RBP14784 551 aa27.96■■■□□ 2.07
FOXA1-203ENST00000553751 DEFB132Q7Z7B7 95 aa27.96■■■□□ 2.07
FOXA1-203ENST00000553751 MAP2P11137 1827 aaKnown RBP27.96■■■□□ 2.07
FOXA1-203ENST00000553751 MARCH10Q8NA82 808 aaPredicted RBP27.94■■■□□ 2.06
FOXA1-203ENST00000553751 TNNT2P45379 298 aaPredicted RBP27.93■■■□□ 2.06
FOXA1-203ENST00000553751 AMER1Q5JTC6 1135 aaPredicted RBP27.93■■■□□ 2.06
FOXA1-203ENST00000553751 POLKQ9UBT6 870 aa27.93■■■□□ 2.06
FOXA1-203ENST00000553751 EXOC5O00471 708 aa27.92■■■□□ 2.06
FOXA1-203ENST00000553751 TRIM37O94972 964 aa27.92■■■□□ 2.06
FOXA1-203ENST00000553751 BCL9O00512 1426 aa27.92■■■□□ 2.06
FOXA1-203ENST00000553751 PER1O15534 1290 aaPredicted RBP27.91■■■□□ 2.06
FOXA1-203ENST00000553751 NBPF6Q5VWK0 638 aa27.91■■■□□ 2.06
FOXA1-203ENST00000553751 NBPF4Q96M43 638 aa27.91■■■□□ 2.06
FOXA1-203ENST00000553751 PPM1GO15355 546 aaPredicted RBP27.9■■■□□ 2.06
FOXA1-203ENST00000553751 BAG6P46379 1132 aa27.9■■■□□ 2.06
FOXA1-203ENST00000553751 MEGF6O75095 1541 aa27.89■■■□□ 2.06
FOXA1-203ENST00000553751 SBF2Q86WG5 1849 aa27.89■■■□□ 2.06
FOXA1-203ENST00000553751 MORC1Q86VD1 984 aa27.88■■■□□ 2.05
FOXA1-203ENST00000553751 USHBP1Q8N6Y0 703 aa27.86■■■□□ 2.05
FOXA1-203ENST00000553751 NCAPD2Q15021 1401 aa27.84■■■□□ 2.05
FOXA1-203ENST00000553751 EN1Q05925 392 aaPredicted RBP27.84■■■□□ 2.05
FOXA1-203ENST00000553751 SHANK3Q9BYB0 1731 aa27.84■■■□□ 2.05
FOXA1-203ENST00000553751 APBA3O96018 575 aa27.82■■■□□ 2.04
FOXA1-203ENST00000553751 NPC1L1Q9UHC9 1359 aa27.81■■■□□ 2.04
FOXA1-203ENST00000553751 PTF1AQ7RTS3 328 aa27.79■■■□□ 2.04
FOXA1-203ENST00000553751 CAMKK2Q96RR4 588 aa27.79■■■□□ 2.04
FOXA1-203ENST00000553751 NHSQ6T4R5 1651 aa27.78■■■□□ 2.04
FOXA1-203ENST00000553751 PARD3Q8TEW0 1356 aa27.78■■■□□ 2.04
FOXA1-203ENST00000553751 EIF4A2Q14240 407 aaKnown RBP27.78■■■□□ 2.04
FOXA1-203ENST00000553751 CC2D1BQ5T0F9 858 aaKnown RBP27.78■■■□□ 2.04
FOXA1-203ENST00000553751 BCL11BQ9C0K0 894 aaPredicted RBP27.78■■■□□ 2.04
FOXA1-203ENST00000553751 EZH2Q15910 746 aaKnown RBP27.77■■■□□ 2.04
FOXA1-203ENST00000553751 RAPGEF4Q8WZA2 1011 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms