RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
PSEN1-206ENST00000553447 FCHSD2O94868 740 aa23.25■■□□□ 1.31
PSEN1-206ENST00000553447 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
PSEN1-206ENST00000553447 AHDC1Q5TGY3 1603 aaPredicted RBP23.25■■□□□ 1.31
PSEN1-206ENST00000553447 ABCA3Q99758 1704 aa23.24■■□□□ 1.31
PSEN1-206ENST00000553447 PDE3BQ13370 1112 aa23.23■■□□□ 1.31
PSEN1-206ENST00000553447 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
PSEN1-206ENST00000553447 PLEKHG5O94827 1062 aa23.22■■□□□ 1.31
PSEN1-206ENST00000553447 ARHGEF25Q86VW2 580 aa23.22■■□□□ 1.31
PSEN1-206ENST00000553447 TCP11L2Q8N4U5 519 aa23.22■■□□□ 1.31
PSEN1-206ENST00000553447 IP6K1Q92551 441 aa23.22■■□□□ 1.31
PSEN1-206ENST00000553447 ZNF521Q96K83 1311 aa23.21■■□□□ 1.31
PSEN1-206ENST00000553447 MAPK8IP3Q9UPT6 1336 aa23.21■■□□□ 1.31
PSEN1-206ENST00000553447 RGPD5Q99666 1765 aa23.21■■□□□ 1.31
PSEN1-206ENST00000553447 HMOX1P09601 288 aa23.2■■□□□ 1.3
PSEN1-206ENST00000553447 NCBP3Q53F19 620 aaKnown RBP23.2■■□□□ 1.3
PSEN1-206ENST00000553447 PRKAR2BP31323 418 aa23.19■■□□□ 1.3
PSEN1-206ENST00000553447 COL18A1P39060 1754 aa23.19■■□□□ 1.3
PSEN1-206ENST00000553447 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
PSEN1-206ENST00000553447 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
PSEN1-206ENST00000553447 ABCC6O95255 1503 aa23.17■■□□□ 1.3
PSEN1-206ENST00000553447 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
PSEN1-206ENST00000553447 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
PSEN1-206ENST00000553447 RRP7AQ9Y3A4 280 aaKnown RBP23.16■■□□□ 1.3
PSEN1-206ENST00000553447 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
PSEN1-206ENST00000553447 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
PSEN1-206ENST00000553447 TOM1O60784 492 aa23.15■■□□□ 1.3
PSEN1-206ENST00000553447 NEFMP07197 916 aa23.15■■□□□ 1.3
PSEN1-206ENST00000553447 CCDC27Q2M243 656 aa23.15■■□□□ 1.3
PSEN1-206ENST00000553447 SULT6B1Q6IMI4 303 aa23.15■■□□□ 1.3
PSEN1-206ENST00000553447 TMPOP42166 694 aaKnown RBP23.14■■□□□ 1.29
PSEN1-206ENST00000553447 ZC3H6P61129 1189 aaKnown RBP23.14■■□□□ 1.29
PSEN1-206ENST00000553447 AEBP1Q8IUX7 1158 aa23.14■■□□□ 1.29
PSEN1-206ENST00000553447 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
PSEN1-206ENST00000553447 KDRP35968 1356 aa23.14■■□□□ 1.29
PSEN1-206ENST00000553447 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
PSEN1-206ENST00000553447 WWC1Q8IX03 1113 aa23.13■■□□□ 1.29
PSEN1-206ENST00000553447 LTV1Q96GA3 475 aaPredicted RBP23.13■■□□□ 1.29
PSEN1-206ENST00000553447 CDCA7LQ96GN5 454 aa23.13■■□□□ 1.29
PSEN1-206ENST00000553447 EYA1Q99502 592 aa23.13■■□□□ 1.29
PSEN1-206ENST00000553447 CPDO75976 1380 aa23.13■■□□□ 1.29
PSEN1-206ENST00000553447 COL22A1Q8NFW1 1626 aaPredicted RBP23.12■■□□□ 1.29
PSEN1-206ENST00000553447 GOLGA2Q08379 1002 aa23.12■■□□□ 1.29
PSEN1-206ENST00000553447 CAMTA1Q9Y6Y1 1673 aa23.12■■□□□ 1.29
PSEN1-206ENST00000553447 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
PSEN1-206ENST00000553447 PHACTR3Q96KR7 559 aa23.11■■□□□ 1.29
PSEN1-206ENST00000553447 FAM208AQ9UK61 1670 aaKnown RBP23.1■■□□□ 1.29
PSEN1-206ENST00000553447 NFE2L2Q16236 605 aa23.09■■□□□ 1.29
PSEN1-206ENST00000553447 LRRC59Q96AG4 307 aaKnown RBP23.09■■□□□ 1.29
PSEN1-206ENST00000553447 KIAA0232Q92628 1395 aa23.08■■□□□ 1.29
PSEN1-206ENST00000553447 LMO7Q8WWI1 1683 aa23.07■■□□□ 1.28
PSEN1-206ENST00000553447 RIPK4P57078 832 aa23.07■■□□□ 1.28
PSEN1-206ENST00000553447 SLFN5Q08AF3 891 aa23.07■■□□□ 1.28
PSEN1-206ENST00000553447 WDR63Q8IWG1 891 aa23.07■■□□□ 1.28
PSEN1-206ENST00000553447 ANKRD24Q8TF21 1146 aa23.07■■□□□ 1.28
PSEN1-206ENST00000553447 TRIM35Q9UPQ4 493 aa23.07■■□□□ 1.28
PSEN1-206ENST00000553447 AXIN2Q9Y2T1 843 aa23.07■■□□□ 1.28
PSEN1-206ENST00000553447 UBAP1LF5GYI3 381 aa23.06■■□□□ 1.28
PSEN1-206ENST00000553447 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
PSEN1-206ENST00000553447 PIP4K2BP78356 416 aa23.05■■□□□ 1.28
PSEN1-206ENST00000553447 E9PSI1 815 aa23.04■■□□□ 1.28
PSEN1-206ENST00000553447 HAP1P54257 671 aaPredicted RBP23.04■■□□□ 1.28
PSEN1-206ENST00000553447 NBPF6Q5VWK0 638 aa23.04■■□□□ 1.28
PSEN1-206ENST00000553447 TRMT2AQ8IZ69 625 aaKnown RBP23.04■■□□□ 1.28
PSEN1-206ENST00000553447 CERKQ8TCT0 537 aa23.04■■□□□ 1.28
PSEN1-206ENST00000553447 NBPF4Q96M43 638 aa23.04■■□□□ 1.28
PSEN1-206ENST00000553447 DUSP27Q5VZP5 1158 aa23.03■■□□□ 1.28
PSEN1-206ENST00000553447 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
PSEN1-206ENST00000553447 ERBB3P21860 1342 aa23.03■■□□□ 1.28
PSEN1-206ENST00000553447 CHRNA2Q15822 529 aa23.02■■□□□ 1.28
PSEN1-206ENST00000553447 USHBP1Q8N6Y0 703 aa23.02■■□□□ 1.28
PSEN1-206ENST00000553447 PRDM11Q9NQV5 511 aa23.01■■□□□ 1.27
PSEN1-206ENST00000553447 GTF3C3Q9Y5Q9 886 aa23.01■■□□□ 1.27
PSEN1-206ENST00000553447 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
PSEN1-206ENST00000553447 SUPT16HQ9Y5B9 1047 aaKnown RBP23■■□□□ 1.27
PSEN1-206ENST00000553447 IL16Q14005 1332 aa22.98■■□□□ 1.27
PSEN1-206ENST00000553447 COL14A1Q05707 1796 aaKnown RBP22.98■■□□□ 1.27
PSEN1-206ENST00000553447 MTHFSDQ2M296 383 aaKnown RBP22.96■■□□□ 1.27
PSEN1-206ENST00000553447 GAS2L2Q8NHY3 880 aa22.96■■□□□ 1.27
PSEN1-206ENST00000553447 COL5A2P05997 1499 aaPredicted RBP22.95■■□□□ 1.26
PSEN1-206ENST00000553447 MYH16Q9H6N6 1097 aa22.94■■□□□ 1.26
PSEN1-206ENST00000553447 RCAN3Q9UKA8 241 aa22.94■■□□□ 1.26
PSEN1-206ENST00000553447 CSB-PGBD3P0DP91 1061 aa22.93■■□□□ 1.26
PSEN1-206ENST00000553447 CALD1Q05682 793 aaKnown RBP22.93■■□□□ 1.26
PSEN1-206ENST00000553447 NLRP2Q9NX02 1062 aa22.92■■□□□ 1.26
PSEN1-206ENST00000553447 LRRC37A3O60309 1634 aa22.91■■□□□ 1.26
PSEN1-206ENST00000553447 FAM83GA6ND36 823 aa22.91■■□□□ 1.26
PSEN1-206ENST00000553447 VIRMAQ69YN4 1812 aaKnown RBP22.91■■□□□ 1.26
PSEN1-206ENST00000553447 RNF123Q5XPI4 1314 aa22.9■■□□□ 1.26
PSEN1-206ENST00000553447 WDR17Q8IZU2 1322 aa22.9■■□□□ 1.26
PSEN1-206ENST00000553447 NEFLP07196 543 aa22.9■■□□□ 1.26
PSEN1-206ENST00000553447 THUMPD2Q9BTF0 503 aaKnown RBP22.9■■□□□ 1.26
PSEN1-206ENST00000553447 PLCH1Q4KWH8 1693 aa22.9■■□□□ 1.26
PSEN1-206ENST00000553447 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.26
PSEN1-206ENST00000553447 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
PSEN1-206ENST00000553447 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
PSEN1-206ENST00000553447 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
PSEN1-206ENST00000553447 PKD1L3Q7Z443 1732 aa22.88■■□□□ 1.25
PSEN1-206ENST00000553447 MAP3K5Q99683 1374 aa22.88■■□□□ 1.25
PSEN1-206ENST00000553447 AMOTQ4VCS5 1084 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms