RNA–Protein interactions for RNA: ENST00000552408.1

PRIM1-207, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-207ENST00000552408 CCDC116Q8IYX3 515 aa9.6□□□□□ -0.87
PRIM1-207ENST00000552408 LINC00528Q8N1L1 170 aa9.6□□□□□ -0.87
PRIM1-207ENST00000552408 MEIOBQ8N635 442 aa9.6□□□□□ -0.87
PRIM1-207ENST00000552408 BMP2P12643 396 aa9.59□□□□□ -0.87
PRIM1-207ENST00000552408 IL27Q8NEV9 243 aa9.59□□□□□ -0.87
PRIM1-207ENST00000552408 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
PRIM1-207ENST00000552408 H3BM21 787 aa9.58□□□□□ -0.88
PRIM1-207ENST00000552408 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
PRIM1-207ENST00000552408 ZBTB33Q86T24 672 aa9.57□□□□□ -0.88
PRIM1-207ENST00000552408 ADAM32Q8TC27 787 aa9.57□□□□□ -0.88
PRIM1-207ENST00000552408 KCTD15Q96SI1 283 aaPredicted RBP9.57□□□□□ -0.88
PRIM1-207ENST00000552408 SLC16A10Q8TF71 515 aa9.56□□□□□ -0.88
PRIM1-207ENST00000552408 SLC10A4Q96EP9 437 aa9.56□□□□□ -0.88
PRIM1-207ENST00000552408 MAN1A2O60476 641 aa9.55□□□□□ -0.88
PRIM1-207ENST00000552408 INTS6LQ5JSJ4 861 aaKnown RBP9.55□□□□□ -0.88
PRIM1-207ENST00000552408 TRIM34Q9BYJ4 488 aa9.55□□□□□ -0.88
PRIM1-207ENST00000552408 DNMT3LQ9UJW3 386 aa9.55□□□□□ -0.88
PRIM1-207ENST00000552408 EMILIN1Q9Y6C2 1016 aa9.55□□□□□ -0.88
PRIM1-207ENST00000552408 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
PRIM1-207ENST00000552408 RAB15P59190 212 aa9.54□□□□□ -0.88
PRIM1-207ENST00000552408 AGBL1Q96MI9 1066 aa9.54□□□□□ -0.88
PRIM1-207ENST00000552408 SOS2Q07890 1332 aaPredicted RBP9.54□□□□□ -0.88
PRIM1-207ENST00000552408 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
PRIM1-207ENST00000552408 PTK2Q05397 1052 aa9.53□□□□□ -0.88
PRIM1-207ENST00000552408 IRF7Q92985 503 aa9.53□□□□□ -0.88
PRIM1-207ENST00000552408 PCMTD1Q96MG8 357 aaPredicted RBP9.53□□□□□ -0.88
PRIM1-207ENST00000552408 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
PRIM1-207ENST00000552408 FIGNL2A6NMB9 653 aa9.52□□□□□ -0.89
PRIM1-207ENST00000552408 UPP2O95045 317 aa9.52□□□□□ -0.89
PRIM1-207ENST00000552408 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
PRIM1-207ENST00000552408 ZC3H4Q9UPT8 1303 aaKnown RBP9.52□□□□□ -0.89
PRIM1-207ENST00000552408 Q6ZVU0 165 aa9.5□□□□□ -0.89
PRIM1-207ENST00000552408 NPAS3Q8IXF0 933 aa9.5□□□□□ -0.89
PRIM1-207ENST00000552408 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
PRIM1-207ENST00000552408 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
PRIM1-207ENST00000552408 RELBQ01201 579 aa9.49□□□□□ -0.89
PRIM1-207ENST00000552408 PGPEP1Q9NXJ5 209 aa9.49□□□□□ -0.89
PRIM1-207ENST00000552408 STK17AQ9UEE5 414 aa9.49□□□□□ -0.89
PRIM1-207ENST00000552408 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
PRIM1-207ENST00000552408 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
PRIM1-207ENST00000552408 ZNF395Q9H8N7 513 aaPredicted RBP9.47□□□□□ -0.89
PRIM1-207ENST00000552408 GOPCQ9HD26 462 aa9.47□□□□□ -0.89
PRIM1-207ENST00000552408 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
PRIM1-207ENST00000552408 ERVH48-1M5A8F1 160 aa9.46□□□□□ -0.9
PRIM1-207ENST00000552408 SPINT1O43278 529 aa9.46□□□□□ -0.9
PRIM1-207ENST00000552408 ADD1P35611 737 aaKnown RBP9.46□□□□□ -0.9
PRIM1-207ENST00000552408 CTSOP43234 321 aaPredicted RBP9.46□□□□□ -0.9
PRIM1-207ENST00000552408 DZIP3Q86Y13 1208 aaKnown RBP9.46□□□□□ -0.9
PRIM1-207ENST00000552408 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
PRIM1-207ENST00000552408 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
PRIM1-207ENST00000552408 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
PRIM1-207ENST00000552408 CDV3Q9UKY7 258 aaKnown RBP9.45□□□□□ -0.9
PRIM1-207ENST00000552408 LILRA1O75019 489 aa9.44□□□□□ -0.9
PRIM1-207ENST00000552408 PTSQ03393 145 aa9.44□□□□□ -0.9
PRIM1-207ENST00000552408 TMEM259Q4ZIN3 620 aa9.44□□□□□ -0.9
PRIM1-207ENST00000552408 FBXO45P0C2W1 286 aa9.43□□□□□ -0.9
PRIM1-207ENST00000552408 VSIG8P0DPA2 414 aa9.43□□□□□ -0.9
PRIM1-207ENST00000552408 DHX9Q08211 1270 aaKnown RBP9.43□□□□□ -0.9
PRIM1-207ENST00000552408 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
PRIM1-207ENST00000552408 KDF1Q8NAX2 398 aaPredicted RBP9.43□□□□□ -0.9
PRIM1-207ENST00000552408 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
PRIM1-207ENST00000552408 ESPNB1AK53 854 aa9.42□□□□□ -0.9
PRIM1-207ENST00000552408 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
PRIM1-207ENST00000552408 CYLDQ9NQC7 956 aa9.42□□□□□ -0.9
PRIM1-207ENST00000552408 PCDHB9Q9Y5E1 797 aa9.42□□□□□ -0.9
PRIM1-207ENST00000552408 GPR37L1O60883 481 aa9.41□□□□□ -0.9
PRIM1-207ENST00000552408 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
PRIM1-207ENST00000552408 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.41□□□□□ -0.9
PRIM1-207ENST00000552408 PNMA1Q8ND90 353 aa9.41□□□□□ -0.9
PRIM1-207ENST00000552408 POLMQ9NP87 494 aaPredicted RBP9.41□□□□□ -0.9
PRIM1-207ENST00000552408 SNRKQ9NRH2 765 aa9.4□□□□□ -0.9
PRIM1-207ENST00000552408 ZBBXA8MT70 800 aa9.39□□□□□ -0.91
PRIM1-207ENST00000552408 ADH1AP07327 375 aa9.39□□□□□ -0.91
PRIM1-207ENST00000552408 KRT76Q01546 638 aa9.39□□□□□ -0.91
PRIM1-207ENST00000552408 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
PRIM1-207ENST00000552408 CCDC155Q8N6L0 562 aa9.38□□□□□ -0.91
PRIM1-207ENST00000552408 MTMR14Q8NCE2 650 aa9.38□□□□□ -0.91
PRIM1-207ENST00000552408 RNF217Q8TC41 542 aa9.38□□□□□ -0.91
PRIM1-207ENST00000552408 SLC35F4A4IF30 521 aa9.36□□□□□ -0.91
PRIM1-207ENST00000552408 PTGIRP43119 386 aa9.36□□□□□ -0.91
PRIM1-207ENST00000552408 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
PRIM1-207ENST00000552408 CNTNAP3BQ96NU0 1288 aa9.34□□□□□ -0.91
PRIM1-207ENST00000552408 CNTNAP3Q9BZ76 1288 aa9.34□□□□□ -0.91
PRIM1-207ENST00000552408 RNFT1Q5M7Z0 435 aa9.33□□□□□ -0.92
PRIM1-207ENST00000552408 VWA5B2Q8N398 1253 aa9.33□□□□□ -0.92
PRIM1-207ENST00000552408 CDC14CA4D256 554 aa9.32□□□□□ -0.92
PRIM1-207ENST00000552408 RHOQP17081 205 aa9.32□□□□□ -0.92
PRIM1-207ENST00000552408 SCTRP47872 440 aa9.32□□□□□ -0.92
PRIM1-207ENST00000552408 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
PRIM1-207ENST00000552408 ITGA6P23229 1130 aa9.31□□□□□ -0.92
PRIM1-207ENST00000552408 NR1H3Q13133 447 aa9.31□□□□□ -0.92
PRIM1-207ENST00000552408 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
PRIM1-207ENST00000552408 SEPT12Q8IYM1 358 aa9.31□□□□□ -0.92
PRIM1-207ENST00000552408 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
PRIM1-207ENST00000552408 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
PRIM1-207ENST00000552408 TBC1D2BQ9UPU7 963 aa9.29□□□□□ -0.92
PRIM1-207ENST00000552408 NDUFB9Q9Y6M9 179 aa9.29□□□□□ -0.92
PRIM1-207ENST00000552408 FAM181BA6NEQ2 426 aa9.28□□□□□ -0.92
PRIM1-207ENST00000552408 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
PRIM1-207ENST00000552408 MEN1O00255 615 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms