RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 BAG6P46379 1132 aa9.98□□□□□ -0.81
PRPF40B-214ENST00000551320 PTF1AQ7RTS3 328 aa9.98□□□□□ -0.81
PRPF40B-214ENST00000551320 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
PRPF40B-214ENST00000551320 SPATA31A1Q5TZJ5 1347 aa9.98□□□□□ -0.81
PRPF40B-214ENST00000551320 ARHGEF28Q8N1W1 1705 aaKnown RBP9.98□□□□□ -0.81
PRPF40B-214ENST00000551320 CRYBG1Q9Y4K1 1723 aa9.98□□□□□ -0.81
PRPF40B-214ENST00000551320 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
PRPF40B-214ENST00000551320 SOX12O15370 315 aa9.97□□□□□ -0.81
PRPF40B-214ENST00000551320 EVA1CP58658 441 aa9.97□□□□□ -0.81
PRPF40B-214ENST00000551320 ABTB2Q8N961 1025 aa9.97□□□□□ -0.81
PRPF40B-214ENST00000551320 APBA3O96018 575 aa9.96□□□□□ -0.82
PRPF40B-214ENST00000551320 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
PRPF40B-214ENST00000551320 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.82
PRPF40B-214ENST00000551320 PYGBP11216 843 aa9.95□□□□□ -0.82
PRPF40B-214ENST00000551320 SRPK2P78362 688 aaKnown RBP9.95□□□□□ -0.82
PRPF40B-214ENST00000551320 CAMKK2Q96RR4 588 aa9.95□□□□□ -0.82
PRPF40B-214ENST00000551320 PHRF1Q9P1Y6 1649 aaKnown RBP9.95□□□□□ -0.82
PRPF40B-214ENST00000551320 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
PRPF40B-214ENST00000551320 THSD7AQ9UPZ6 1657 aa9.94□□□□□ -0.82
PRPF40B-214ENST00000551320 CABP1Q9NZU7 370 aa9.94□□□□□ -0.82
PRPF40B-214ENST00000551320 NEUROD1Q13562 356 aa9.93□□□□□ -0.82
PRPF40B-214ENST00000551320 CCDC61Q9Y6R9 512 aa9.93□□□□□ -0.82
PRPF40B-214ENST00000551320 TNS1Q9HBL0 1735 aaKnown RBP9.93□□□□□ -0.82
PRPF40B-214ENST00000551320 PPIP5K1Q6PFW1 1433 aa9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 SSH2Q76I76 1423 aa9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 GCP02774 474 aa9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 CHRM1P11229 460 aaPredicted RBP9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 PDE3BQ13370 1112 aa9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 PDGFDQ9GZP0 370 aaPredicted RBP9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 NRKQ7Z2Y5 1582 aa9.92□□□□□ -0.82
PRPF40B-214ENST00000551320 POLR3AO14802 1390 aaPredicted RBP9.91□□□□□ -0.82
PRPF40B-214ENST00000551320 EIF3AQ14152 1382 aaKnown RBP9.91□□□□□ -0.82
PRPF40B-214ENST00000551320 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
PRPF40B-214ENST00000551320 L3MBTL2Q969R5 705 aa9.91□□□□□ -0.82
PRPF40B-214ENST00000551320 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
PRPF40B-214ENST00000551320 TOPAZ1Q8N9V7 1692 aa9.9□□□□□ -0.82
PRPF40B-214ENST00000551320 CENPJQ9HC77 1338 aaPredicted RBP9.9□□□□□ -0.82
PRPF40B-214ENST00000551320 RIOK3O14730 519 aaKnown RBP9.9□□□□□ -0.82
PRPF40B-214ENST00000551320 NLRP6P59044 892 aa9.9□□□□□ -0.82
PRPF40B-214ENST00000551320 FAM196AQ6ZSG2 479 aa9.9□□□□□ -0.82
PRPF40B-214ENST00000551320 TCP11L2Q8N4U5 519 aa9.9□□□□□ -0.82
PRPF40B-214ENST00000551320 RGPD1P0DJD0 1748 aa9.9□□□□□ -0.83
PRPF40B-214ENST00000551320 USP19O94966 1318 aa9.89□□□□□ -0.83
PRPF40B-214ENST00000551320 ITSN1Q15811 1721 aa9.89□□□□□ -0.83
PRPF40B-214ENST00000551320 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
PRPF40B-214ENST00000551320 LRP5O75197 1615 aa9.88□□□□□ -0.83
PRPF40B-214ENST00000551320 LMO7Q8WWI1 1683 aa9.87□□□□□ -0.83
PRPF40B-214ENST00000551320 COL5A2P05997 1499 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-214ENST00000551320 BARGINQ6ZT62 677 aa9.87□□□□□ -0.83
PRPF40B-214ENST00000551320 TOM1L2Q6ZVM7 507 aa9.87□□□□□ -0.83
PRPF40B-214ENST00000551320 NLRP13Q86W25 1043 aa9.87□□□□□ -0.83
PRPF40B-214ENST00000551320 QRICH2Q9H0J4 1663 aa9.87□□□□□ -0.83
PRPF40B-214ENST00000551320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.86□□□□□ -0.83
PRPF40B-214ENST00000551320 MARCH10Q8NA82 808 aaPredicted RBP9.86□□□□□ -0.83
PRPF40B-214ENST00000551320 DISP2A7MBM2 1401 aa9.85□□□□□ -0.83
PRPF40B-214ENST00000551320 USP6P35125 1406 aa9.85□□□□□ -0.83
PRPF40B-214ENST00000551320 KCNQ2O43526 872 aa9.85□□□□□ -0.83
PRPF40B-214ENST00000551320 CD44P16070 742 aaKnown RBP9.85□□□□□ -0.83
PRPF40B-214ENST00000551320 CPDO75976 1380 aa9.85□□□□□ -0.83
PRPF40B-214ENST00000551320 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
PRPF40B-214ENST00000551320 PIK3C2AO00443 1686 aa9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 RGPD5Q99666 1765 aa9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 ZBTB7AO95365 584 aa9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 FBLN1P23142 703 aa9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 PLCB2Q00722 1185 aa9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 BBXQ8WY36 941 aaPredicted RBP9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
PRPF40B-214ENST00000551320 TTC21BQ7Z4L5 1316 aa9.83□□□□□ -0.84
PRPF40B-214ENST00000551320 CRB1P82279 1406 aa9.83□□□□□ -0.84
PRPF40B-214ENST00000551320 DDB1Q16531 1140 aa9.83□□□□□ -0.84
PRPF40B-214ENST00000551320 NME9Q86XW9 330 aa9.83□□□□□ -0.84
PRPF40B-214ENST00000551320 STAC3Q96MF2 364 aa9.83□□□□□ -0.84
PRPF40B-214ENST00000551320 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
PRPF40B-214ENST00000551320 KIAA1210Q9ULL0 1709 aa9.82□□□□□ -0.84
PRPF40B-214ENST00000551320 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
PRPF40B-214ENST00000551320 PPP1R1BQ9UD71 204 aaPredicted RBP9.82□□□□□ -0.84
PRPF40B-214ENST00000551320 RREB1Q92766 1687 aa9.82□□□□□ -0.84
PRPF40B-214ENST00000551320 COL18A1P39060 1754 aa9.82□□□□□ -0.84
PRPF40B-214ENST00000551320 UTRNP46939 3433 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 AATKQ6ZMQ8 1374 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 KCNQ4P56696 695 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 NBPF14Q5TI25 921 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 ARHGEF25Q86VW2 580 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 TMC1Q8TDI8 760 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 PEAK1Q9H792 1746 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 LRRC37A3O60309 1634 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 SLIT3O75094 1523 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 EVC2Q86UK5 1308 aa9.81□□□□□ -0.84
PRPF40B-214ENST00000551320 LTV1Q96GA3 475 aaPredicted RBP9.8□□□□□ -0.84
PRPF40B-214ENST00000551320 SLC12A5Q9H2X9 1139 aa9.8□□□□□ -0.84
PRPF40B-214ENST00000551320 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
PRPF40B-214ENST00000551320 THRAP3Q9Y2W1 955 aaKnown RBP9.8□□□□□ -0.84
PRPF40B-214ENST00000551320 CPSF1Q10570 1443 aaKnown RBP9.8□□□□□ -0.84
PRPF40B-214ENST00000551320 WDR17Q8IZU2 1322 aa9.8□□□□□ -0.84
PRPF40B-214ENST00000551320 PARP4Q9UKK3 1724 aaKnown RBP9.79□□□□□ -0.84
PRPF40B-214ENST00000551320 TRPM1Q7Z4N2 1603 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms