RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
RAB5C-207ENST00000550504 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
RAB5C-207ENST00000550504 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
RAB5C-207ENST00000550504 FLT4P35916 1363 aa13.8□□□□□ -0.2
RAB5C-207ENST00000550504 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
RAB5C-207ENST00000550504 IP6K1Q92551 441 aa13.79□□□□□ -0.2
RAB5C-207ENST00000550504 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
RAB5C-207ENST00000550504 CPDO75976 1380 aa13.79□□□□□ -0.2
RAB5C-207ENST00000550504 COL3A1P02461 1466 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-207ENST00000550504 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
RAB5C-207ENST00000550504 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
RAB5C-207ENST00000550504 LTV1Q96GA3 475 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-207ENST00000550504 INSRP06213 1382 aa13.77□□□□□ -0.21
RAB5C-207ENST00000550504 EIF4A2Q14240 407 aaKnown RBP13.77□□□□□ -0.21
RAB5C-207ENST00000550504 WDR43Q15061 677 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAB5C-207ENST00000550504 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
RAB5C-207ENST00000550504 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
RAB5C-207ENST00000550504 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
RAB5C-207ENST00000550504 SPATA31A6Q5VVP1 1343 aa13.76□□□□□ -0.21
RAB5C-207ENST00000550504 FAM83GA6ND36 823 aa13.76□□□□□ -0.21
RAB5C-207ENST00000550504 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
RAB5C-207ENST00000550504 COL18A1P39060 1754 aa13.76□□□□□ -0.21
RAB5C-207ENST00000550504 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
RAB5C-207ENST00000550504 IL13P35225 146 aa13.75□□□□□ -0.21
RAB5C-207ENST00000550504 ANKRD24Q8TF21 1146 aa13.75□□□□□ -0.21
RAB5C-207ENST00000550504 NUDCQ9Y266 331 aa13.75□□□□□ -0.21
RAB5C-207ENST00000550504 BLMP54132 1417 aaPredicted RBP13.74□□□□□ -0.21
RAB5C-207ENST00000550504 U2AF1L5P0DN76 240 aaPredicted RBP13.74□□□□□ -0.21
RAB5C-207ENST00000550504 U2AF1Q01081 240 aaKnown RBP eCLIP13.74□□□□□ -0.21
RAB5C-207ENST00000550504 LRP6O75581 1613 aa13.74□□□□□ -0.21
RAB5C-207ENST00000550504 ADAMTS8Q9UP79 889 aa13.73□□□□□ -0.21
RAB5C-207ENST00000550504 COL14A1Q05707 1796 aaKnown RBP13.73□□□□□ -0.21
RAB5C-207ENST00000550504 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
RAB5C-207ENST00000550504 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
RAB5C-207ENST00000550504 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
RAB5C-207ENST00000550504 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
RAB5C-207ENST00000550504 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
RAB5C-207ENST00000550504 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
RAB5C-207ENST00000550504 ABCC6O95255 1503 aa13.72□□□□□ -0.21
RAB5C-207ENST00000550504 ERBB3P21860 1342 aa13.71□□□□□ -0.21
RAB5C-207ENST00000550504 HMOX1P09601 288 aa13.71□□□□□ -0.21
RAB5C-207ENST00000550504 BTG4Q9NY30 223 aa13.71□□□□□ -0.21
RAB5C-207ENST00000550504 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
RAB5C-207ENST00000550504 EVA1CP58658 441 aa13.7□□□□□ -0.22
RAB5C-207ENST00000550504 USHBP1Q8N6Y0 703 aa13.7□□□□□ -0.22
RAB5C-207ENST00000550504 NGLY1Q96IV0 654 aa13.7□□□□□ -0.22
RAB5C-207ENST00000550504 EYA1Q99502 592 aa13.7□□□□□ -0.22
RAB5C-207ENST00000550504 COL5A2P05997 1499 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-207ENST00000550504 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 SULT6B1Q6IMI4 303 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 NLRP2Q9NX02 1062 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
RAB5C-207ENST00000550504 IGSF1Q8N6C5 1336 aa13.68□□□□□ -0.22
RAB5C-207ENST00000550504 YTHDC1Q96MU7 727 aaKnown RBP13.68□□□□□ -0.22
RAB5C-207ENST00000550504 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
RAB5C-207ENST00000550504 TOM1L2Q6ZVM7 507 aa13.67□□□□□ -0.22
RAB5C-207ENST00000550504 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
RAB5C-207ENST00000550504 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
RAB5C-207ENST00000550504 RSPH6AQ9H0K4 717 aa13.66□□□□□ -0.22
RAB5C-207ENST00000550504 FAM208AQ9UK61 1670 aaKnown RBP13.66□□□□□ -0.22
RAB5C-207ENST00000550504 SLIT2O94813 1529 aa13.65□□□□□ -0.22
RAB5C-207ENST00000550504 FCHSD2O94868 740 aa13.65□□□□□ -0.22
RAB5C-207ENST00000550504 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
RAB5C-207ENST00000550504 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
RAB5C-207ENST00000550504 NWD2Q9ULI1 1742 aa13.64□□□□□ -0.23
RAB5C-207ENST00000550504 RUNDC1Q96C34 613 aa13.64□□□□□ -0.23
RAB5C-207ENST00000550504 CRB1P82279 1406 aa13.64□□□□□ -0.23
RAB5C-207ENST00000550504 KDRP35968 1356 aa13.63□□□□□ -0.23
RAB5C-207ENST00000550504 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
RAB5C-207ENST00000550504 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
RAB5C-207ENST00000550504 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
RAB5C-207ENST00000550504 PNNQ9H307 717 aaKnown RBP13.63□□□□□ -0.23
RAB5C-207ENST00000550504 USP21Q9UK80 565 aa13.63□□□□□ -0.23
RAB5C-207ENST00000550504 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
RAB5C-207ENST00000550504 AFF2P51816 1311 aa13.63□□□□□ -0.23
RAB5C-207ENST00000550504 MAPK8IP3Q9UPT6 1336 aa13.63□□□□□ -0.23
RAB5C-207ENST00000550504 NEFMP07197 916 aa13.62□□□□□ -0.23
RAB5C-207ENST00000550504 HNRNPUQ00839 825 aaKnown RBP eCLIP13.62□□□□□ -0.23
RAB5C-207ENST00000550504 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
RAB5C-207ENST00000550504 CARD10Q9BWT7 1032 aa13.62□□□□□ -0.23
RAB5C-207ENST00000550504 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
RAB5C-207ENST00000550504 APAF1O14727 1248 aa13.61□□□□□ -0.23
RAB5C-207ENST00000550504 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
RAB5C-207ENST00000550504 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
RAB5C-207ENST00000550504 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
RAB5C-207ENST00000550504 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
RAB5C-207ENST00000550504 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
RAB5C-207ENST00000550504 RAPGEF4Q8WZA2 1011 aa13.6□□□□□ -0.23
RAB5C-207ENST00000550504 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
RAB5C-207ENST00000550504 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
RAB5C-207ENST00000550504 MEGF6O75095 1541 aa13.59□□□□□ -0.23
RAB5C-207ENST00000550504 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.59□□□□□ -0.23
RAB5C-207ENST00000550504 VPS72Q15906 364 aa13.58□□□□□ -0.24
RAB5C-207ENST00000550504 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAB5C-207ENST00000550504 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms