RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 QTRT2Q9H974 415 aaKnown RBP16.44■□□□□ 0.22
PFDN5-208ENST00000549995 BTG4Q9NY30 223 aa16.44■□□□□ 0.22
PFDN5-208ENST00000549995 MAP2P11137 1827 aaKnown RBP16.44■□□□□ 0.22
PFDN5-208ENST00000549995 RGS12O14924 1447 aa16.44■□□□□ 0.22
PFDN5-208ENST00000549995 ILDR2Q71H61 639 aa16.43■□□□□ 0.22
PFDN5-208ENST00000549995 SMG6Q86US8 1419 aaKnown RBP16.43■□□□□ 0.22
PFDN5-208ENST00000549995 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
PFDN5-208ENST00000549995 BRWD3Q6RI45 1802 aa16.42■□□□□ 0.22
PFDN5-208ENST00000549995 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
PFDN5-208ENST00000549995 GJD4Q96KN9 370 aaPredicted RBP16.41■□□□□ 0.22
PFDN5-208ENST00000549995 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
PFDN5-208ENST00000549995 SPATA31A5Q5VU36 1347 aa16.41■□□□□ 0.22
PFDN5-208ENST00000549995 SPATA31A7Q8IWB4 1347 aa16.41■□□□□ 0.22
PFDN5-208ENST00000549995 CRB1P82279 1406 aa16.4■□□□□ 0.22
PFDN5-208ENST00000549995 ONECUT3O60422 494 aaPredicted RBP16.4■□□□□ 0.22
PFDN5-208ENST00000549995 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
PFDN5-208ENST00000549995 RXRBP28702 533 aa16.4■□□□□ 0.22
PFDN5-208ENST00000549995 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
PFDN5-208ENST00000549995 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
PFDN5-208ENST00000549995 AXIN2Q9Y2T1 843 aa16.38■□□□□ 0.21
PFDN5-208ENST00000549995 ERBB3P21860 1342 aa16.38■□□□□ 0.21
PFDN5-208ENST00000549995 MAP3K19Q56UN5 1328 aa16.38■□□□□ 0.21
PFDN5-208ENST00000549995 SPATA31A1Q5TZJ5 1347 aa16.38■□□□□ 0.21
PFDN5-208ENST00000549995 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
PFDN5-208ENST00000549995 RGPD2P0DJD1 1756 aa16.36■□□□□ 0.21
PFDN5-208ENST00000549995 IP6K1Q92551 441 aa16.36■□□□□ 0.21
PFDN5-208ENST00000549995 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
PFDN5-208ENST00000549995 LRRC37A3O60309 1634 aa16.36■□□□□ 0.21
PFDN5-208ENST00000549995 FLT4P35916 1363 aa16.36■□□□□ 0.21
PFDN5-208ENST00000549995 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
PFDN5-208ENST00000549995 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
PFDN5-208ENST00000549995 BARGINQ6ZT62 677 aa16.34■□□□□ 0.21
PFDN5-208ENST00000549995 THRAP3Q9Y2W1 955 aaKnown RBP16.34■□□□□ 0.21
PFDN5-208ENST00000549995 INSRP06213 1382 aa16.34■□□□□ 0.21
PFDN5-208ENST00000549995 SOX12O15370 315 aa16.33■□□□□ 0.2
PFDN5-208ENST00000549995 HOXC9P31274 260 aa16.33■□□□□ 0.2
PFDN5-208ENST00000549995 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
PFDN5-208ENST00000549995 RGPD1P0DJD0 1748 aa16.32■□□□□ 0.2
PFDN5-208ENST00000549995 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
PFDN5-208ENST00000549995 FBLN1P23142 703 aa16.3■□□□□ 0.2
PFDN5-208ENST00000549995 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
PFDN5-208ENST00000549995 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
PFDN5-208ENST00000549995 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
PFDN5-208ENST00000549995 SHANK3Q9BYB0 1731 aa16.3■□□□□ 0.2
PFDN5-208ENST00000549995 EVA1CP58658 441 aa16.29■□□□□ 0.2
PFDN5-208ENST00000549995 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
PFDN5-208ENST00000549995 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
PFDN5-208ENST00000549995 ANKRD24Q8TF21 1146 aa16.28■□□□□ 0.2
PFDN5-208ENST00000549995 PKD1L3Q7Z443 1732 aa16.28■□□□□ 0.2
PFDN5-208ENST00000549995 PLEKHG2Q9H7P9 1386 aa16.27■□□□□ 0.2
PFDN5-208ENST00000549995 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.2
PFDN5-208ENST00000549995 AMPHP49418 695 aa16.27■□□□□ 0.2
PFDN5-208ENST00000549995 MORC1Q86VD1 984 aa16.27■□□□□ 0.2
PFDN5-208ENST00000549995 SOCS7O14512 581 aa16.26■□□□□ 0.19
PFDN5-208ENST00000549995 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
PFDN5-208ENST00000549995 TOM1L2Q6ZVM7 507 aa16.26■□□□□ 0.19
PFDN5-208ENST00000549995 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
PFDN5-208ENST00000549995 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
PFDN5-208ENST00000549995 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
PFDN5-208ENST00000549995 EP400Q96L91 3159 aa16.25■□□□□ 0.19
PFDN5-208ENST00000549995 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
PFDN5-208ENST00000549995 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
PFDN5-208ENST00000549995 PARD3Q8TEW0 1356 aa16.25■□□□□ 0.19
PFDN5-208ENST00000549995 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
PFDN5-208ENST00000549995 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
PFDN5-208ENST00000549995 BCL9O00512 1426 aa16.24■□□□□ 0.19
PFDN5-208ENST00000549995 TNS1Q9HBL0 1735 aaKnown RBP16.24■□□□□ 0.19
PFDN5-208ENST00000549995 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
PFDN5-208ENST00000549995 MEGF6O75095 1541 aa16.21■□□□□ 0.19
PFDN5-208ENST00000549995 CSB-PGBD3P0DP91 1061 aa16.21■□□□□ 0.19
PFDN5-208ENST00000549995 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
PFDN5-208ENST00000549995 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
PFDN5-208ENST00000549995 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 KDRP35968 1356 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 NBPF6Q5VWK0 638 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 NBPF4Q96M43 638 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 USP35Q9P2H5 1018 aa16.19■□□□□ 0.18
PFDN5-208ENST00000549995 NHSQ6T4R5 1651 aa16.18■□□□□ 0.18
PFDN5-208ENST00000549995 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
PFDN5-208ENST00000549995 TNNT2P45379 298 aaPredicted RBP16.18■□□□□ 0.18
PFDN5-208ENST00000549995 EIF4A2Q14240 407 aaKnown RBP16.18■□□□□ 0.18
PFDN5-208ENST00000549995 IL2RBP14784 551 aa16.17■□□□□ 0.18
PFDN5-208ENST00000549995 MTHFSP49914 203 aa16.16■□□□□ 0.18
PFDN5-208ENST00000549995 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
PFDN5-208ENST00000549995 LTV1Q96GA3 475 aaPredicted RBP16.16■□□□□ 0.18
PFDN5-208ENST00000549995 IL13P35225 146 aa16.15■□□□□ 0.18
PFDN5-208ENST00000549995 DDB1Q16531 1140 aa16.15■□□□□ 0.18
PFDN5-208ENST00000549995 UPF1Q92900 1129 aaKnown RBP eCLIP16.15■□□□□ 0.18
PFDN5-208ENST00000549995 EYA1Q99502 592 aa16.15■□□□□ 0.18
PFDN5-208ENST00000549995 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
PFDN5-208ENST00000549995 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
PFDN5-208ENST00000549995 DOT1LQ8TEK3 1739 aa16.14■□□□□ 0.17
PFDN5-208ENST00000549995 RREB1Q92766 1687 aa16.12■□□□□ 0.17
PFDN5-208ENST00000549995 TOGARAM1Q9Y4F4 1720 aa16.12■□□□□ 0.17
PFDN5-208ENST00000549995 RALBP1Q15311 655 aa16.12■□□□□ 0.17
PFDN5-208ENST00000549995 CCDC125Q86Z20 511 aa16.12■□□□□ 0.17
PFDN5-208ENST00000549995 A0A0G2JS52 829 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms