RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
LETMD1-209ENST00000547318 CCDC61Q9Y6R9 512 aa18.4■□□□□ 0.54
LETMD1-209ENST00000547318 COG3Q96JB2 828 aa18.4■□□□□ 0.54
LETMD1-209ENST00000547318 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
LETMD1-209ENST00000547318 TSPOAP1O95153 1857 aa18.4■□□□□ 0.54
LETMD1-209ENST00000547318 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
LETMD1-209ENST00000547318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.39■□□□□ 0.53
LETMD1-209ENST00000547318 TBC1D2Q9BYX2 928 aa18.39■□□□□ 0.53
LETMD1-209ENST00000547318 TOPAZ1Q8N9V7 1692 aa18.38■□□□□ 0.53
LETMD1-209ENST00000547318 VAMP4O75379 141 aa18.38■□□□□ 0.53
LETMD1-209ENST00000547318 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
LETMD1-209ENST00000547318 MRPL50Q8N5N7 158 aaKnown RBP18.38■□□□□ 0.53
LETMD1-209ENST00000547318 ABCC4O15439 1325 aa18.38■□□□□ 0.53
LETMD1-209ENST00000547318 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
LETMD1-209ENST00000547318 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
LETMD1-209ENST00000547318 NUDT16Q96DE0 195 aaKnown RBP18.37■□□□□ 0.53
LETMD1-209ENST00000547318 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
LETMD1-209ENST00000547318 METP08581 1390 aa18.36■□□□□ 0.53
LETMD1-209ENST00000547318 RBM25P49756 843 aaKnown RBP18.36■□□□□ 0.53
LETMD1-209ENST00000547318 CHD1LQ86WJ1 897 aa18.36■□□□□ 0.53
LETMD1-209ENST00000547318 UBR1Q8IWV7 1749 aa18.35■□□□□ 0.53
LETMD1-209ENST00000547318 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
LETMD1-209ENST00000547318 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
LETMD1-209ENST00000547318 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
LETMD1-209ENST00000547318 TNRQ92752 1358 aa18.34■□□□□ 0.53
LETMD1-209ENST00000547318 SNX21Q969T3 373 aa18.33■□□□□ 0.53
LETMD1-209ENST00000547318 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.53
LETMD1-209ENST00000547318 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
LETMD1-209ENST00000547318 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
LETMD1-209ENST00000547318 EMILIN1Q9Y6C2 1016 aa18.32■□□□□ 0.52
LETMD1-209ENST00000547318 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
LETMD1-209ENST00000547318 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
LETMD1-209ENST00000547318 L1TD1Q5T7N2 865 aaKnown RBP18.32■□□□□ 0.52
LETMD1-209ENST00000547318 NME9Q86XW9 330 aa18.32■□□□□ 0.52
LETMD1-209ENST00000547318 MBIPQ9NS73 344 aa18.32■□□□□ 0.52
LETMD1-209ENST00000547318 NCOA3Q9Y6Q9 1424 aa18.31■□□□□ 0.52
LETMD1-209ENST00000547318 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
LETMD1-209ENST00000547318 HMOX1P09601 288 aa18.3■□□□□ 0.52
LETMD1-209ENST00000547318 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
LETMD1-209ENST00000547318 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
LETMD1-209ENST00000547318 OVOS2A0A0J9YW53 1432 aa18.3■□□□□ 0.52
LETMD1-209ENST00000547318 OVOS2Q6IE36 1432 aa18.3■□□□□ 0.52
LETMD1-209ENST00000547318 RGPD1P0DJD0 1748 aa18.29■□□□□ 0.52
LETMD1-209ENST00000547318 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
LETMD1-209ENST00000547318 TTC21BQ7Z4L5 1316 aa18.29■□□□□ 0.52
LETMD1-209ENST00000547318 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
LETMD1-209ENST00000547318 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
LETMD1-209ENST00000547318 USP31Q70CQ4 1352 aa18.27■□□□□ 0.52
LETMD1-209ENST00000547318 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.52
LETMD1-209ENST00000547318 PTMSP20962 102 aa18.27■□□□□ 0.52
LETMD1-209ENST00000547318 TXNDC2Q86VQ3 553 aa18.27■□□□□ 0.52
LETMD1-209ENST00000547318 LNPKQ9C0E8 428 aa18.27■□□□□ 0.51
LETMD1-209ENST00000547318 ADAMTS13Q76LX8 1427 aa18.26■□□□□ 0.51
LETMD1-209ENST00000547318 RIMS1Q86UR5 1692 aaKnown RBP18.26■□□□□ 0.51
LETMD1-209ENST00000547318 INTS3Q68E01 1043 aaKnown RBP18.26■□□□□ 0.51
LETMD1-209ENST00000547318 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-209ENST00000547318 USP6P35125 1406 aa18.25■□□□□ 0.51
LETMD1-209ENST00000547318 PTPRCP08575 1304 aa18.25■□□□□ 0.51
LETMD1-209ENST00000547318 DDX11L8A8MPP1 907 aa18.25■□□□□ 0.51
LETMD1-209ENST00000547318 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
LETMD1-209ENST00000547318 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
LETMD1-209ENST00000547318 ANKRD45Q5TZF3 282 aa18.24■□□□□ 0.51
LETMD1-209ENST00000547318 ARHGEF10O15013 1369 aa18.24■□□□□ 0.51
LETMD1-209ENST00000547318 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-209ENST00000547318 DIP2AQ14689 1571 aa18.24■□□□□ 0.51
LETMD1-209ENST00000547318 MCM4P33991 863 aa18.23■□□□□ 0.51
LETMD1-209ENST00000547318 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
LETMD1-209ENST00000547318 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
LETMD1-209ENST00000547318 IL27Q8NEV9 243 aa18.23■□□□□ 0.51
LETMD1-209ENST00000547318 ROBO2Q9HCK4 1378 aa18.22■□□□□ 0.51
LETMD1-209ENST00000547318 RPAP2Q8IXW5 612 aaPredicted RBP18.22■□□□□ 0.51
LETMD1-209ENST00000547318 FMN2Q9NZ56 1722 aa18.22■□□□□ 0.51
LETMD1-209ENST00000547318 CHL1O00533 1208 aa18.22■□□□□ 0.51
LETMD1-209ENST00000547318 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
LETMD1-209ENST00000547318 THUMPD2Q9BTF0 503 aaKnown RBP18.22■□□□□ 0.51
LETMD1-209ENST00000547318 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
LETMD1-209ENST00000547318 CDC45O75419 566 aa18.21■□□□□ 0.51
LETMD1-209ENST00000547318 DDIT3P35638 169 aa18.21■□□□□ 0.51
LETMD1-209ENST00000547318 MLECQ14165 292 aa18.21■□□□□ 0.51
LETMD1-209ENST00000547318 FBLN1P23142 703 aa18.2■□□□□ 0.5
LETMD1-209ENST00000547318 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
LETMD1-209ENST00000547318 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
LETMD1-209ENST00000547318 SLIT1O75093 1534 aa18.2■□□□□ 0.5
LETMD1-209ENST00000547318 DCTPP1Q9H773 170 aa18.2■□□□□ 0.5
LETMD1-209ENST00000547318 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
LETMD1-209ENST00000547318 PEAK1Q9H792 1746 aa18.19■□□□□ 0.5
LETMD1-209ENST00000547318 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
LETMD1-209ENST00000547318 ACEP12821 1306 aa18.18■□□□□ 0.5
LETMD1-209ENST00000547318 USP54Q70EL1 1684 aa18.18■□□□□ 0.5
LETMD1-209ENST00000547318 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
LETMD1-209ENST00000547318 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
LETMD1-209ENST00000547318 SOS1Q07889 1333 aaPredicted RBP18.18■□□□□ 0.5
LETMD1-209ENST00000547318 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
LETMD1-209ENST00000547318 RGS12O14924 1447 aa18.17■□□□□ 0.5
LETMD1-209ENST00000547318 PTPRUQ92729 1446 aa18.17■□□□□ 0.5
LETMD1-209ENST00000547318 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
LETMD1-209ENST00000547318 FAM43AQ8N2R8 423 aa18.16■□□□□ 0.5
LETMD1-209ENST00000547318 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
LETMD1-209ENST00000547318 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
LETMD1-209ENST00000547318 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms