RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 A0A0G2JS52 829 aa22.15■■□□□ 1.14
DDX54-204ENST00000546898 MYT1Q01538 1121 aa22.15■■□□□ 1.14
DDX54-204ENST00000546898 ZRANB1Q9UGI0 708 aa22.14■■□□□ 1.13
DDX54-204ENST00000546898 PARP4Q9UKK3 1724 aaKnown RBP22.14■■□□□ 1.13
DDX54-204ENST00000546898 SOX12O15370 315 aa22.13■■□□□ 1.13
DDX54-204ENST00000546898 LARP1Q6PKG0 1096 aaKnown RBP22.13■■□□□ 1.13
DDX54-204ENST00000546898 KRT27Q7Z3Y8 459 aa22.13■■□□□ 1.13
DDX54-204ENST00000546898 EP400Q96L91 3159 aa22.13■■□□□ 1.13
DDX54-204ENST00000546898 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
DDX54-204ENST00000546898 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
DDX54-204ENST00000546898 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
DDX54-204ENST00000546898 CCDC125Q86Z20 511 aa22.1■■□□□ 1.13
DDX54-204ENST00000546898 TCP11L2Q8N4U5 519 aa22.1■■□□□ 1.13
DDX54-204ENST00000546898 WDR17Q8IZU2 1322 aa22.09■■□□□ 1.13
DDX54-204ENST00000546898 COG3Q96JB2 828 aa22.09■■□□□ 1.13
DDX54-204ENST00000546898 USP35Q9P2H5 1018 aa22.09■■□□□ 1.13
DDX54-204ENST00000546898 BLMP54132 1417 aaPredicted RBP22.08■■□□□ 1.13
DDX54-204ENST00000546898 AXIN2Q9Y2T1 843 aa22.08■■□□□ 1.13
DDX54-204ENST00000546898 RGPD1P0DJD0 1748 aa22.08■■□□□ 1.12
DDX54-204ENST00000546898 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
DDX54-204ENST00000546898 TOM1L2Q6ZVM7 507 aa22.06■■□□□ 1.12
DDX54-204ENST00000546898 LRRC37A3O60309 1634 aa22.06■■□□□ 1.12
DDX54-204ENST00000546898 NSD3Q9BZ95 1437 aa22.06■■□□□ 1.12
DDX54-204ENST00000546898 ANKRD26Q9UPS8 1709 aa22.03■■□□□ 1.12
DDX54-204ENST00000546898 FYB1O15117 783 aa22.03■■□□□ 1.12
DDX54-204ENST00000546898 ERBB3P21860 1342 aa22.03■■□□□ 1.12
DDX54-204ENST00000546898 CSB-PGBD3P0DP91 1061 aa22.02■■□□□ 1.12
DDX54-204ENST00000546898 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
DDX54-204ENST00000546898 TNS1Q9HBL0 1735 aaKnown RBP22.01■■□□□ 1.11
DDX54-204ENST00000546898 CARD10Q9BWT7 1032 aa22.01■■□□□ 1.11
DDX54-204ENST00000546898 RTL1A6NKG5 1358 aa22■■□□□ 1.11
DDX54-204ENST00000546898 POLR3GLQ9BT43 218 aa22■■□□□ 1.11
DDX54-204ENST00000546898 CDCA7Q9BWT1 371 aaPredicted RBP22■■□□□ 1.11
DDX54-204ENST00000546898 CARD14Q9BXL6 1004 aa22■■□□□ 1.11
DDX54-204ENST00000546898 GGNBP2Q9H3C7 697 aa22■■□□□ 1.11
DDX54-204ENST00000546898 PDE3BQ13370 1112 aa21.99■■□□□ 1.11
DDX54-204ENST00000546898 SF3B2Q13435 895 aaKnown RBP21.99■■□□□ 1.11
DDX54-204ENST00000546898 DISP2A7MBM2 1401 aa21.98■■□□□ 1.11
DDX54-204ENST00000546898 IP6K1Q92551 441 aa21.98■■□□□ 1.11
DDX54-204ENST00000546898 MAP3K19Q56UN5 1328 aa21.98■■□□□ 1.11
DDX54-204ENST00000546898 PEAK1Q9H792 1746 aa21.97■■□□□ 1.11
DDX54-204ENST00000546898 CGNL1Q0VF96 1302 aa21.97■■□□□ 1.11
DDX54-204ENST00000546898 FAM196AQ6ZSG2 479 aa21.96■■□□□ 1.11
DDX54-204ENST00000546898 ANKRD24Q8TF21 1146 aa21.96■■□□□ 1.11
DDX54-204ENST00000546898 FAM182BQ5T319 152 aa21.95■■□□□ 1.1
DDX54-204ENST00000546898 KIF24Q5T7B8 1368 aa21.95■■□□□ 1.1
DDX54-204ENST00000546898 C11orf95C9JLR9 678 aaPredicted RBP21.94■■□□□ 1.1
DDX54-204ENST00000546898 DDB1Q16531 1140 aa21.94■■□□□ 1.1
DDX54-204ENST00000546898 OVOS2A0A0G2JMS6 1433 aa21.94■■□□□ 1.1
DDX54-204ENST00000546898 SBF2Q86WG5 1849 aa21.94■■□□□ 1.1
DDX54-204ENST00000546898 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
DDX54-204ENST00000546898 MAP2P11137 1827 aaKnown RBP21.93■■□□□ 1.1
DDX54-204ENST00000546898 HOXC9P31274 260 aa21.93■■□□□ 1.1
DDX54-204ENST00000546898 AMPHP49418 695 aa21.93■■□□□ 1.1
DDX54-204ENST00000546898 NLRP2Q9NX02 1062 aa21.92■■□□□ 1.1
DDX54-204ENST00000546898 TNS2Q63HR2 1409 aa21.91■■□□□ 1.1
DDX54-204ENST00000546898 BAG6P46379 1132 aa21.91■■□□□ 1.1
DDX54-204ENST00000546898 FLT4P35916 1363 aa21.9■■□□□ 1.1
DDX54-204ENST00000546898 FBLN1P23142 703 aa21.9■■□□□ 1.1
DDX54-204ENST00000546898 RRS1Q15050 365 aaKnown RBP21.9■■□□□ 1.1
DDX54-204ENST00000546898 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.1
DDX54-204ENST00000546898 NSD2O96028 1365 aa21.89■■□□□ 1.1
DDX54-204ENST00000546898 KIF7Q2M1P5 1343 aa21.89■■□□□ 1.1
DDX54-204ENST00000546898 PANK3Q9H999 370 aa21.89■■□□□ 1.09
DDX54-204ENST00000546898 DEFB132Q7Z7B7 95 aa21.88■■□□□ 1.09
DDX54-204ENST00000546898 BCL9O00512 1426 aa21.88■■□□□ 1.09
DDX54-204ENST00000546898 INSRP06213 1382 aa21.87■■□□□ 1.09
DDX54-204ENST00000546898 EXOC5O00471 708 aa21.86■■□□□ 1.09
DDX54-204ENST00000546898 IL2RBP14784 551 aa21.86■■□□□ 1.09
DDX54-204ENST00000546898 LTV1Q96GA3 475 aaPredicted RBP21.86■■□□□ 1.09
DDX54-204ENST00000546898 RGPD3A6NKT7 1758 aaPredicted RBP21.86■■□□□ 1.09
DDX54-204ENST00000546898 RGPD4Q7Z3J3 1758 aa21.86■■□□□ 1.09
DDX54-204ENST00000546898 TRIM37O94972 964 aa21.85■■□□□ 1.09
DDX54-204ENST00000546898 RREB1Q92766 1687 aa21.84■■□□□ 1.09
DDX54-204ENST00000546898 MARCH10Q8NA82 808 aaPredicted RBP21.83■■□□□ 1.09
DDX54-204ENST00000546898 PARD3Q8TEW0 1356 aa21.83■■□□□ 1.08
DDX54-204ENST00000546898 EMILIN1Q9Y6C2 1016 aa21.82■■□□□ 1.08
DDX54-204ENST00000546898 SHANK3Q9BYB0 1731 aa21.81■■□□□ 1.08
DDX54-204ENST00000546898 KNSTRNQ9Y448 316 aa21.81■■□□□ 1.08
DDX54-204ENST00000546898 NHSQ6T4R5 1651 aa21.81■■□□□ 1.08
DDX54-204ENST00000546898 HSP90AB2PQ58FF8 381 aa21.8■■□□□ 1.08
DDX54-204ENST00000546898 EN1Q05925 392 aaPredicted RBP21.79■■□□□ 1.08
DDX54-204ENST00000546898 NUP188Q5SRE5 1749 aa21.78■■□□□ 1.08
DDX54-204ENST00000546898 APBA3O96018 575 aa21.78■■□□□ 1.08
DDX54-204ENST00000546898 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
DDX54-204ENST00000546898 MEGF6O75095 1541 aa21.77■■□□□ 1.08
DDX54-204ENST00000546898 POLKQ9UBT6 870 aa21.77■■□□□ 1.08
DDX54-204ENST00000546898 NCAPD2Q15021 1401 aa21.76■■□□□ 1.07
DDX54-204ENST00000546898 NBPF6Q5VWK0 638 aa21.76■■□□□ 1.07
DDX54-204ENST00000546898 NBPF4Q96M43 638 aa21.76■■□□□ 1.07
DDX54-204ENST00000546898 CAMKK2Q96RR4 588 aa21.76■■□□□ 1.07
DDX54-204ENST00000546898 KAT6BQ8WYB5 2073 aa21.75■■□□□ 1.07
DDX54-204ENST00000546898 PPM1GO15355 546 aaPredicted RBP21.75■■□□□ 1.07
DDX54-204ENST00000546898 BCL11BQ9C0K0 894 aaPredicted RBP21.75■■□□□ 1.07
DDX54-204ENST00000546898 EZH2Q15910 746 aaKnown RBP21.74■■□□□ 1.07
DDX54-204ENST00000546898 MORC1Q86VD1 984 aa21.74■■□□□ 1.07
DDX54-204ENST00000546898 PKD1L3Q7Z443 1732 aa21.74■■□□□ 1.07
DDX54-204ENST00000546898 TNNT2P45379 298 aaPredicted RBP21.73■■□□□ 1.07
DDX54-204ENST00000546898 AMER1Q5JTC6 1135 aaPredicted RBP21.73■■□□□ 1.07
DDX54-204ENST00000546898 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms