RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 PIK3R4Q99570 1358 aa12.37□□□□□ -0.43
UBC-213ENST00000546120 ZNF518AQ6AHZ1 1483 aa12.37□□□□□ -0.43
UBC-213ENST00000546120 TRPM2O94759 1503 aa12.37□□□□□ -0.43
UBC-213ENST00000546120 NOS1P29475 1434 aa12.37□□□□□ -0.43
UBC-213ENST00000546120 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
UBC-213ENST00000546120 TRIM27P14373 513 aa12.36□□□□□ -0.43
UBC-213ENST00000546120 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
UBC-213ENST00000546120 GAS2L2Q8NHY3 880 aa12.36□□□□□ -0.43
UBC-213ENST00000546120 ATP6V1DQ9Y5K8 247 aa12.36□□□□□ -0.43
UBC-213ENST00000546120 MYO5CQ9NQX4 1742 aa12.36□□□□□ -0.43
UBC-213ENST00000546120 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
UBC-213ENST00000546120 ASXL2Q76L83 1435 aa12.36□□□□□ -0.43
UBC-213ENST00000546120 MYOM1P52179 1685 aa12.35□□□□□ -0.43
UBC-213ENST00000546120 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
UBC-213ENST00000546120 MED14O60244 1454 aa12.35□□□□□ -0.43
UBC-213ENST00000546120 PLB1Q6P1J6 1458 aa12.35□□□□□ -0.43
UBC-213ENST00000546120 PRPF40AO75400 957 aaKnown RBP12.35□□□□□ -0.43
UBC-213ENST00000546120 ANAPC15P60006 121 aa12.35□□□□□ -0.43
UBC-213ENST00000546120 DHX8Q14562 1220 aaKnown RBP12.35□□□□□ -0.43
UBC-213ENST00000546120 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
UBC-213ENST00000546120 TRAPPC8Q9Y2L5 1435 aa12.35□□□□□ -0.43
UBC-213ENST00000546120 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
UBC-213ENST00000546120 TUBB4AP04350 444 aa12.34□□□□□ -0.43
UBC-213ENST00000546120 IL17RAQ96F46 866 aa12.34□□□□□ -0.43
UBC-213ENST00000546120 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
UBC-213ENST00000546120 ZHX1Q9UKY1 873 aaPredicted RBP12.34□□□□□ -0.43
UBC-213ENST00000546120 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■□□□□ 9
UBC-213ENST00000546120 ABCA8O94911 1581 aa12.34□□□□□ -0.43
UBC-213ENST00000546120 SPHKAPQ2M3C7 1700 aa12.34□□□□□ -0.43
UBC-213ENST00000546120 MYO3AQ8NEV4 1616 aa12.33□□□□□ -0.43
UBC-213ENST00000546120 USP26Q9BXU7 913 aa12.33□□□□□ -0.44
UBC-213ENST00000546120 CAVIN2O95810 425 aa12.32□□□□□ -0.44
UBC-213ENST00000546120 MCCP23508 829 aa12.32□□□□□ -0.44
UBC-213ENST00000546120 CCDC183Q5T5S1 534 aa12.32□□□□□ -0.44
UBC-213ENST00000546120 TIGD1Q96MW7 591 aa12.32□□□□□ -0.44
UBC-213ENST00000546120 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
UBC-213ENST00000546120 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
UBC-213ENST00000546120 ERVK-7P63135 1459 aa12.32□□□□□ -0.44
UBC-213ENST00000546120 DIP2BQ9P265 1576 aa12.31□□□□□ -0.44
UBC-213ENST00000546120 PREX2Q70Z35 1606 aa12.31□□□□□ -0.44
UBC-213ENST00000546120 NEMFO60524 1076 aa12.31□□□□□ -0.44
UBC-213ENST00000546120 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
UBC-213ENST00000546120 GPT2Q8TD30 523 aa12.31□□□□□ -0.44
UBC-213ENST00000546120 WDR33Q9C0J8 1336 aaKnown RBP12.31□□□□□ -0.44
UBC-213ENST00000546120 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 ATP10BO94823 1461 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 SMTNL1A8MU46 457 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 KIF2AO00139 706 aaPredicted RBP12.3□□□□□ -0.44
UBC-213ENST00000546120 BRD1O95696 1058 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 CUL4AQ13619 759 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 SLFNL1Q499Z3 407 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 CTR9Q6PD62 1173 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
UBC-213ENST00000546120 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
UBC-213ENST00000546120 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
UBC-213ENST00000546120 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
UBC-213ENST00000546120 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 SYCE3A1L190 88 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 KDM4AO75164 1064 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 CBX1P83916 185 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 ANKRD45Q5TZF3 282 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.29□□□□□ -0.44
UBC-213ENST00000546120 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 LNPKQ9C0E8 428 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 TMEM51Q9NW97 253 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
UBC-213ENST00000546120 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
UBC-213ENST00000546120 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
UBC-213ENST00000546120 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
UBC-213ENST00000546120 MX1P20591 662 aa12.28□□□□□ -0.44
UBC-213ENST00000546120 HNRNPMP52272 730 aaKnown RBP eCLIP12.28□□□□□ -0.445e-20■■■□□ 15.9
UBC-213ENST00000546120 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
UBC-213ENST00000546120 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
UBC-213ENST00000546120 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
UBC-213ENST00000546120 DDX41Q9UJV9 622 aaKnown RBP12.28□□□□□ -0.44
UBC-213ENST00000546120 CEP152O94986 1710 aa12.28□□□□□ -0.44
UBC-213ENST00000546120 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
UBC-213ENST00000546120 TTC22Q5TAA0 569 aa12.27□□□□□ -0.45
UBC-213ENST00000546120 KRT222Q8N1A0 295 aa12.27□□□□□ -0.45
UBC-213ENST00000546120 SAMD9LQ8IVG5 1584 aa12.26□□□□□ -0.45
UBC-213ENST00000546120 ZCCHC11Q5TAX3 1644 aaKnown RBP12.26□□□□□ -0.45
UBC-213ENST00000546120 ERC2O15083 957 aa12.26□□□□□ -0.45
UBC-213ENST00000546120 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
UBC-213ENST00000546120 UBE2HP62256 183 aa12.26□□□□□ -0.45
UBC-213ENST00000546120 EXOSC9Q06265 439 aaKnown RBP12.26□□□□□ -0.45
UBC-213ENST00000546120 DCTPP1Q9H773 170 aa12.26□□□□□ -0.45
UBC-213ENST00000546120 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
UBC-213ENST00000546120 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
UBC-213ENST00000546120 OSBPL3Q9H4L5 887 aa12.25□□□□□ -0.45
UBC-213ENST00000546120 PRDM10Q9NQV6 1147 aa12.25□□□□□ -0.45
UBC-213ENST00000546120 NRXN1Q9ULB1 1477 aa12.25□□□□□ -0.45
UBC-213ENST00000546120 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
UBC-213ENST00000546120 ADCY5O95622 1261 aa12.24□□□□□ -0.45
UBC-213ENST00000546120 MTHFSP49914 203 aa12.24□□□□□ -0.45
UBC-213ENST00000546120 ATP2B3Q16720 1220 aa12.24□□□□□ -0.45
UBC-213ENST00000546120 RPGRIP1LQ68CZ1 1315 aa12.24□□□□□ -0.45
UBC-213ENST00000546120 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
UBC-213ENST00000546120 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms