RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 NME9Q86XW9 330 aa23.11■■□□□ 1.29
TNFAIP1-202ENST00000544907 PROSER2Q86WR7 435 aaPredicted RBP23.1■■□□□ 1.29
TNFAIP1-202ENST00000544907 DZIP1LQ8IYY4 767 aaKnown RBP23.1■■□□□ 1.29
TNFAIP1-202ENST00000544907 KIF16BQ96L93 1317 aa23.1■■□□□ 1.29
TNFAIP1-202ENST00000544907 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.1■■□□□ 1.29
TNFAIP1-202ENST00000544907 RLBP1P12271 317 aa23.09■■□□□ 1.29
TNFAIP1-202ENST00000544907 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
TNFAIP1-202ENST00000544907 C8orf34Q49A92 452 aa23.09■■□□□ 1.29
TNFAIP1-202ENST00000544907 TSR2Q969E8 191 aaKnown RBP23.09■■□□□ 1.29
TNFAIP1-202ENST00000544907 IPO8O15397 1037 aaKnown RBP23.08■■□□□ 1.29
TNFAIP1-202ENST00000544907 PAK3O75914 559 aaPredicted RBP23.08■■□□□ 1.29
TNFAIP1-202ENST00000544907 RWDD1Q9H446 243 aaPredicted RBP23.08■■□□□ 1.29
TNFAIP1-202ENST00000544907 SMC4Q9NTJ3 1288 aa23.08■■□□□ 1.29
TNFAIP1-202ENST00000544907 OVOS2A0A0J9YW53 1432 aa23.07■■□□□ 1.28
TNFAIP1-202ENST00000544907 OVOS2Q6IE36 1432 aa23.07■■□□□ 1.28
TNFAIP1-202ENST00000544907 XIRP1Q702N8 1843 aaKnown RBP23.07■■□□□ 1.28
TNFAIP1-202ENST00000544907 TMEM94Q12767 1356 aa23.07■■□□□ 1.28
TNFAIP1-202ENST00000544907 ATF7IPQ6VMQ6 1270 aa23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 FTSJ3Q8IY81 847 aaKnown RBP23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 EMILIN1Q9Y6C2 1016 aa23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 USP6P35125 1406 aa23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 TTC21BQ7Z4L5 1316 aa23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 SSH1Q8WYL5 1049 aa23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 IFT57Q9NWB7 429 aa23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 DDX19BQ9UMR2 479 aa23.06■■□□□ 1.28
TNFAIP1-202ENST00000544907 SSH2Q76I76 1423 aa23.05■■□□□ 1.28
TNFAIP1-202ENST00000544907 USP31Q70CQ4 1352 aa23.05■■□□□ 1.28
TNFAIP1-202ENST00000544907 SKAP1Q86WV1 359 aa23.04■■□□□ 1.28
TNFAIP1-202ENST00000544907 RBM33Q96EV2 1170 aaKnown RBP23.04■■□□□ 1.28
TNFAIP1-202ENST00000544907 TTC21AQ8NDW8 1320 aa23.04■■□□□ 1.28
TNFAIP1-202ENST00000544907 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 GNAI1P63096 354 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 NALCNQ8IZF0 1738 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 BCL2L13Q9BXK5 485 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 NCOA3Q9Y6Q9 1424 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 ZNF853P0CG23 659 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 TRIM27P14373 513 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
TNFAIP1-202ENST00000544907 ACEP12821 1306 aa23.01■■□□□ 1.27
TNFAIP1-202ENST00000544907 HDAC1Q13547 482 aaPredicted RBP23.01■■□□□ 1.27
TNFAIP1-202ENST00000544907 NPM2Q86SE8 214 aaKnown RBP23.01■■□□□ 1.27
TNFAIP1-202ENST00000544907 ARHGAP45Q92619 1136 aa23.01■■□□□ 1.27
TNFAIP1-202ENST00000544907 RGS3P49796 1198 aa23■■□□□ 1.27
TNFAIP1-202ENST00000544907 ADGRL3Q9HAR2 1447 aa23■■□□□ 1.27
TNFAIP1-202ENST00000544907 PHACTR3Q96KR7 559 aa23■■□□□ 1.27
TNFAIP1-202ENST00000544907 CHMP4BQ9H444 224 aaKnown RBP23■■□□□ 1.27
TNFAIP1-202ENST00000544907 VIRMAQ69YN4 1812 aaKnown RBP22.99■■□□□ 1.27
TNFAIP1-202ENST00000544907 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
TNFAIP1-202ENST00000544907 MSH6P52701 1360 aa22.98■■□□□ 1.27
TNFAIP1-202ENST00000544907 ZRANB1Q9UGI0 708 aa22.98■■□□□ 1.27
TNFAIP1-202ENST00000544907 TNNQ9UQP3 1299 aa22.98■■□□□ 1.27
TNFAIP1-202ENST00000544907 FBLN1P23142 703 aa22.97■■□□□ 1.27
TNFAIP1-202ENST00000544907 CERKQ8TCT0 537 aa22.97■■□□□ 1.27
TNFAIP1-202ENST00000544907 NOB1Q9ULX3 412 aaKnown RBP22.97■■□□□ 1.27
TNFAIP1-202ENST00000544907 HMOX1P09601 288 aa22.97■■□□□ 1.27
TNFAIP1-202ENST00000544907 CFAP44Q96MT7 982 aa22.97■■□□□ 1.27
TNFAIP1-202ENST00000544907 RRS1Q15050 365 aaKnown RBP22.95■■□□□ 1.26
TNFAIP1-202ENST00000544907 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
TNFAIP1-202ENST00000544907 C19orf44Q9H6X5 657 aa22.94■■□□□ 1.26
TNFAIP1-202ENST00000544907 DCCP43146 1447 aa22.94■■□□□ 1.26
TNFAIP1-202ENST00000544907 VAMP4O75379 141 aa22.93■■□□□ 1.26
TNFAIP1-202ENST00000544907 ZBTB40Q9NUA8 1239 aa22.93■■□□□ 1.26
TNFAIP1-202ENST00000544907 RGPD1P0DJD0 1748 aa22.93■■□□□ 1.26
TNFAIP1-202ENST00000544907 KIF24Q5T7B8 1368 aa22.92■■□□□ 1.26
TNFAIP1-202ENST00000544907 EIF4A2Q14240 407 aaKnown RBP22.91■■□□□ 1.26
TNFAIP1-202ENST00000544907 PDZRN3Q9UPQ7 1066 aa22.91■■□□□ 1.26
TNFAIP1-202ENST00000544907 ARHGEF10O15013 1369 aa22.91■■□□□ 1.26
TNFAIP1-202ENST00000544907 ITPRIPQ8IWB1 547 aa22.9■■□□□ 1.26
TNFAIP1-202ENST00000544907 USP35Q9P2H5 1018 aa22.9■■□□□ 1.26
TNFAIP1-202ENST00000544907 ATF3P18847 181 aa22.9■■□□□ 1.26
TNFAIP1-202ENST00000544907 SMC5Q8IY18 1101 aa22.9■■□□□ 1.26
TNFAIP1-202ENST00000544907 MRPL50Q8N5N7 158 aaKnown RBP22.9■■□□□ 1.26
TNFAIP1-202ENST00000544907 TMEM57Q8N5G2 664 aa22.89■■□□□ 1.25
TNFAIP1-202ENST00000544907 MBIPQ9NS73 344 aa22.89■■□□□ 1.25
TNFAIP1-202ENST00000544907 CADPS2Q86UW7 1296 aa22.88■■□□□ 1.25
TNFAIP1-202ENST00000544907 USP54Q70EL1 1684 aa22.88■■□□□ 1.25
TNFAIP1-202ENST00000544907 FMN2Q9NZ56 1722 aa22.88■■□□□ 1.25
TNFAIP1-202ENST00000544907 SBNO1A3KN83 1393 aa22.88■■□□□ 1.25
TNFAIP1-202ENST00000544907 PEAK1Q9H792 1746 aa22.86■■□□□ 1.25
TNFAIP1-202ENST00000544907 DLG5Q8TDM6 1919 aa22.86■■□□□ 1.25
TNFAIP1-202ENST00000544907 FLT4P35916 1363 aa22.86■■□□□ 1.25
TNFAIP1-202ENST00000544907 KIAA0232Q92628 1395 aa22.85■■□□□ 1.25
TNFAIP1-202ENST00000544907 KDRP35968 1356 aa22.85■■□□□ 1.25
TNFAIP1-202ENST00000544907 ABCC4O15439 1325 aa22.85■■□□□ 1.25
TNFAIP1-202ENST00000544907 TWISTNBQ3B726 338 aaPredicted RBP22.84■■□□□ 1.25
TNFAIP1-202ENST00000544907 LAS1LQ9Y4W2 734 aaKnown RBP22.84■■□□□ 1.25
TNFAIP1-202ENST00000544907 SULT6B1Q6IMI4 303 aa22.84■■□□□ 1.25
TNFAIP1-202ENST00000544907 API5Q9BZZ5 524 aaKnown RBP22.84■■□□□ 1.25
TNFAIP1-202ENST00000544907 TOM1O60784 492 aa22.83■■□□□ 1.24
TNFAIP1-202ENST00000544907 DAXXQ9UER7 740 aaPredicted RBP22.83■■□□□ 1.24
TNFAIP1-202ENST00000544907 USP19O94966 1318 aa22.82■■□□□ 1.24
TNFAIP1-202ENST00000544907 MST1RQ04912 1400 aa22.82■■□□□ 1.24
TNFAIP1-202ENST00000544907 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
TNFAIP1-202ENST00000544907 UBAP1LF5GYI3 381 aa22.81■■□□□ 1.24
TNFAIP1-202ENST00000544907 CHL1O00533 1208 aa22.81■■□□□ 1.24
TNFAIP1-202ENST00000544907 NGDNQ8NEJ9 315 aaKnown RBP22.81■■□□□ 1.24
TNFAIP1-202ENST00000544907 ZBTB7BO15156 539 aaPredicted RBP22.81■■□□□ 1.24
TNFAIP1-202ENST00000544907 RTL5Q5HYW3 569 aaPredicted RBP22.81■■□□□ 1.24
TNFAIP1-202ENST00000544907 UPF2Q9HAU5 1272 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms