RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 ARHGEF25Q86VW2 580 aa28.12■■■□□ 2.09
COMMD5-207ENST00000543949 EIF4A2Q14240 407 aaKnown RBP28.11■■■□□ 2.09
COMMD5-207ENST00000543949 ZBED9Q6R2W3 1325 aa28.11■■■□□ 2.09
COMMD5-207ENST00000543949 ZBTB7CA1YPR0 619 aa28.11■■■□□ 2.09
COMMD5-207ENST00000543949 IP6K1Q92551 441 aa28.11■■■□□ 2.09
COMMD5-207ENST00000543949 COL16A1Q07092 1604 aaPredicted RBP28.1■■■□□ 2.09
COMMD5-207ENST00000543949 CCDC146Q8IYE0 955 aa28.1■■■□□ 2.09
COMMD5-207ENST00000543949 CABLES1Q8TDN4 633 aa28.1■■■□□ 2.09
COMMD5-207ENST00000543949 PNNQ9H307 717 aaKnown RBP28.1■■■□□ 2.09
COMMD5-207ENST00000543949 RGPD1P0DJD0 1748 aa28.09■■■□□ 2.09
COMMD5-207ENST00000543949 RUNDC1Q96C34 613 aa28.08■■■□□ 2.09
COMMD5-207ENST00000543949 COL22A1Q8NFW1 1626 aaPredicted RBP28.07■■■□□ 2.08
COMMD5-207ENST00000543949 ABCC6O95255 1503 aa28.07■■■□□ 2.08
COMMD5-207ENST00000543949 HAP1P54257 671 aaPredicted RBP28.07■■■□□ 2.08
COMMD5-207ENST00000543949 ZC3H6P61129 1189 aaKnown RBP28.07■■■□□ 2.08
COMMD5-207ENST00000543949 FCHSD2O94868 740 aa28.06■■■□□ 2.08
COMMD5-207ENST00000543949 CPDO75976 1380 aa28.05■■■□□ 2.08
COMMD5-207ENST00000543949 MAPK8IP3Q9UPT6 1336 aa28.02■■■□□ 2.08
COMMD5-207ENST00000543949 NEFMP07197 916 aa28.02■■■□□ 2.08
COMMD5-207ENST00000543949 COL18A1P39060 1754 aa28.02■■■□□ 2.08
COMMD5-207ENST00000543949 RGPD5Q99666 1765 aa28.02■■■□□ 2.08
COMMD5-207ENST00000543949 SENP3-EIF4A1A0A087X0R7 540 aa28.01■■■□□ 2.07
COMMD5-207ENST00000543949 APAF1O14727 1248 aa28.01■■■□□ 2.07
COMMD5-207ENST00000543949 NGEFQ8N5V2 710 aa28.01■■■□□ 2.07
COMMD5-207ENST00000543949 RSPH6AQ9H0K4 717 aa28.01■■■□□ 2.07
COMMD5-207ENST00000543949 KIAA0232Q92628 1395 aa28.01■■■□□ 2.07
COMMD5-207ENST00000543949 HMOX1P09601 288 aa28■■■□□ 2.07
COMMD5-207ENST00000543949 LTV1Q96GA3 475 aaPredicted RBP27.99■■■□□ 2.07
COMMD5-207ENST00000543949 PLEKHF1Q96S99 279 aa27.99■■■□□ 2.07
COMMD5-207ENST00000543949 SALL2Q9Y467 1007 aaPredicted RBP27.99■■■□□ 2.07
COMMD5-207ENST00000543949 IGSF1Q8N6C5 1336 aa27.98■■■□□ 2.07
COMMD5-207ENST00000543949 PRKAR2BP31323 418 aa27.98■■■□□ 2.07
COMMD5-207ENST00000543949 SULT6B1Q6IMI4 303 aa27.97■■■□□ 2.07
COMMD5-207ENST00000543949 TCP11L2Q8N4U5 519 aa27.97■■■□□ 2.07
COMMD5-207ENST00000543949 EYA1Q99502 592 aa27.97■■■□□ 2.07
COMMD5-207ENST00000543949 PRDM11Q9NQV5 511 aa27.96■■■□□ 2.07
COMMD5-207ENST00000543949 FAM208AQ9UK61 1670 aaKnown RBP27.94■■■□□ 2.06
COMMD5-207ENST00000543949 ANKRD24Q8TF21 1146 aa27.94■■■□□ 2.06
COMMD5-207ENST00000543949 AXIN2Q9Y2T1 843 aa27.94■■■□□ 2.06
COMMD5-207ENST00000543949 CHRNA2Q15822 529 aa27.94■■■□□ 2.06
COMMD5-207ENST00000543949 KDRP35968 1356 aa27.93■■■□□ 2.06
COMMD5-207ENST00000543949 RGPD2P0DJD1 1756 aa27.93■■■□□ 2.06
COMMD5-207ENST00000543949 LMO7Q8WWI1 1683 aa27.93■■■□□ 2.06
COMMD5-207ENST00000543949 AEBP1Q8IUX7 1158 aa27.92■■■□□ 2.06
COMMD5-207ENST00000543949 NCBP3Q53F19 620 aaKnown RBP27.91■■■□□ 2.06
COMMD5-207ENST00000543949 ERBB3P21860 1342 aa27.91■■■□□ 2.06
COMMD5-207ENST00000543949 CAMTA1Q9Y6Y1 1673 aa27.91■■■□□ 2.06
COMMD5-207ENST00000543949 PDE3BQ13370 1112 aa27.9■■■□□ 2.06
COMMD5-207ENST00000543949 TMPOP42166 694 aaKnown RBP27.88■■■□□ 2.05
COMMD5-207ENST00000543949 NEUROD2Q15784 382 aa27.88■■■□□ 2.05
COMMD5-207ENST00000543949 RRP7AQ9Y3A4 280 aaKnown RBP27.88■■■□□ 2.05
COMMD5-207ENST00000543949 COL14A1Q05707 1796 aaKnown RBP27.88■■■□□ 2.05
COMMD5-207ENST00000543949 NBPF6Q5VWK0 638 aa27.86■■■□□ 2.05
COMMD5-207ENST00000543949 NBPF4Q96M43 638 aa27.86■■■□□ 2.05
COMMD5-207ENST00000543949 NCAPD2Q15021 1401 aa27.86■■■□□ 2.05
COMMD5-207ENST00000543949 JCADQ9P266 1359 aa27.86■■■□□ 2.05
COMMD5-207ENST00000543949 CCDC27Q2M243 656 aa27.86■■■□□ 2.05
COMMD5-207ENST00000543949 PHACTR3Q96KR7 559 aa27.86■■■□□ 2.05
COMMD5-207ENST00000543949 ZNF521Q96K83 1311 aa27.85■■■□□ 2.05
COMMD5-207ENST00000543949 CSB-PGBD3P0DP91 1061 aa27.85■■■□□ 2.05
COMMD5-207ENST00000543949 NFE2L2Q16236 605 aa27.84■■■□□ 2.05
COMMD5-207ENST00000543949 USHBP1Q8N6Y0 703 aa27.83■■■□□ 2.05
COMMD5-207ENST00000543949 DLG5Q8TDM6 1919 aa27.83■■■□□ 2.05
COMMD5-207ENST00000543949 RIPK4P57078 832 aa27.82■■■□□ 2.04
COMMD5-207ENST00000543949 WWC1Q8IX03 1113 aa27.82■■■□□ 2.04
COMMD5-207ENST00000543949 COL5A2P05997 1499 aaPredicted RBP27.82■■■□□ 2.04
COMMD5-207ENST00000543949 FAM83GA6ND36 823 aa27.82■■■□□ 2.04
COMMD5-207ENST00000543949 PHF23Q9BUL5 403 aaPredicted RBP27.82■■■□□ 2.04
COMMD5-207ENST00000543949 GOLGA2Q08379 1002 aa27.81■■■□□ 2.04
COMMD5-207ENST00000543949 NLRP2Q9NX02 1062 aa27.8■■■□□ 2.04
COMMD5-207ENST00000543949 WDR17Q8IZU2 1322 aa27.79■■■□□ 2.04
COMMD5-207ENST00000543949 LMOD3Q0VAK6 560 aa27.77■■■□□ 2.04
COMMD5-207ENST00000543949 NUTM2BA6NNL0 878 aaPredicted RBP27.77■■■□□ 2.04
COMMD5-207ENST00000543949 NUTM2EB1AL46 878 aaPredicted RBP27.77■■■□□ 2.04
COMMD5-207ENST00000543949 NUTM2AQ8IVF1 878 aaPredicted RBP27.77■■■□□ 2.04
COMMD5-207ENST00000543949 WDR63Q8IWG1 891 aa27.77■■■□□ 2.04
COMMD5-207ENST00000543949 PLCH1Q4KWH8 1693 aa27.77■■■□□ 2.04
COMMD5-207ENST00000543949 EVA1CP58658 441 aa27.76■■■□□ 2.03
COMMD5-207ENST00000543949 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.03
COMMD5-207ENST00000543949 TRIM35Q9UPQ4 493 aa27.76■■■□□ 2.03
COMMD5-207ENST00000543949 HSPA1LP34931 641 aa27.75■■■□□ 2.03
COMMD5-207ENST00000543949 ADAMTS2O95450 1211 aa27.74■■■□□ 2.03
COMMD5-207ENST00000543949 CDCA7LQ96GN5 454 aa27.74■■■□□ 2.03
COMMD5-207ENST00000543949 BTG4Q9NY30 223 aa27.74■■■□□ 2.03
COMMD5-207ENST00000543949 SPATA31A6Q5VVP1 1343 aa27.74■■■□□ 2.03
COMMD5-207ENST00000543949 TOM1L2Q6ZVM7 507 aa27.73■■■□□ 2.03
COMMD5-207ENST00000543949 MTHFSDQ2M296 383 aaKnown RBP27.73■■■□□ 2.03
COMMD5-207ENST00000543949 STRN4Q9NRL3 753 aa27.73■■■□□ 2.03
COMMD5-207ENST00000543949 E9PSI1 815 aa27.72■■■□□ 2.03
COMMD5-207ENST00000543949 RAPGEF4Q8WZA2 1011 aa27.71■■■□□ 2.03
COMMD5-207ENST00000543949 NWD2Q9ULI1 1742 aa27.7■■■□□ 2.03
COMMD5-207ENST00000543949 SLFN5Q08AF3 891 aa27.7■■■□□ 2.03
COMMD5-207ENST00000543949 PLEKHG2Q9H7P9 1386 aa27.7■■■□□ 2.02
COMMD5-207ENST00000543949 AMOTQ4VCS5 1084 aa27.69■■■□□ 2.02
COMMD5-207ENST00000543949 CALD1Q05682 793 aaKnown RBP27.69■■■□□ 2.02
COMMD5-207ENST00000543949 PLEKHO1Q53GL0 409 aaPredicted RBP27.69■■■□□ 2.02
COMMD5-207ENST00000543949 CARD10Q9BWT7 1032 aa27.69■■■□□ 2.02
COMMD5-207ENST00000543949 CRB1P82279 1406 aa27.68■■■□□ 2.02
COMMD5-207ENST00000543949 NRAPQ86VF7 1730 aa27.68■■■□□ 2.02
COMMD5-207ENST00000543949 PARP4Q9UKK3 1724 aaKnown RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms