RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CPDO75976 1380 aa37.14■■■■□ 3.54
CCM2-218ENST00000541586 AATKQ6ZMQ8 1374 aa37.13■■■■□ 3.54
CCM2-218ENST00000541586 AXIN2Q9Y2T1 843 aa37.1■■■■□ 3.53
CCM2-218ENST00000541586 BTG4Q9NY30 223 aa37.1■■■■□ 3.53
CCM2-218ENST00000541586 MAP2P11137 1827 aaKnown RBP37.09■■■■□ 3.53
CCM2-218ENST00000541586 MTHFSP49914 203 aa37.09■■■■□ 3.53
CCM2-218ENST00000541586 IP6K1Q92551 441 aa37.07■■■■□ 3.52
CCM2-218ENST00000541586 HOXC9P31274 260 aa37.06■■■■□ 3.52
CCM2-218ENST00000541586 LTN1O94822 1766 aa37.06■■■■□ 3.52
CCM2-218ENST00000541586 HSP90AB2PQ58FF8 381 aa37.05■■■■□ 3.52
CCM2-218ENST00000541586 EVA1CP58658 441 aa37.04■■■■□ 3.52
CCM2-218ENST00000541586 WDR43Q15061 677 aaKnown RBP eCLIP37.04■■■■□ 3.52
CCM2-218ENST00000541586 LTV1Q96GA3 475 aaPredicted RBP37.04■■■■□ 3.52
CCM2-218ENST00000541586 STRN4Q9NRL3 753 aa37.04■■■■□ 3.52
CCM2-218ENST00000541586 INSRP06213 1382 aa37.04■■■■□ 3.52
CCM2-218ENST00000541586 AFF2P51816 1311 aa37.02■■■■□ 3.52
CCM2-218ENST00000541586 ADAMTS8Q9UP79 889 aa37.02■■■■□ 3.52
CCM2-218ENST00000541586 FNBP4Q8N3X1 1017 aaPredicted RBP37■■■■□ 3.51
CCM2-218ENST00000541586 USP21Q9UK80 565 aa37■■■■□ 3.51
CCM2-218ENST00000541586 ZBED9Q6R2W3 1325 aa37■■■■□ 3.51
CCM2-218ENST00000541586 FLT4P35916 1363 aa37■■■■□ 3.51
CCM2-218ENST00000541586 COL14A1Q05707 1796 aaKnown RBP36.99■■■■□ 3.51
CCM2-218ENST00000541586 BLMP54132 1417 aaPredicted RBP36.99■■■■□ 3.51
CCM2-218ENST00000541586 CFAP53Q96M91 514 aa36.98■■■■□ 3.51
CCM2-218ENST00000541586 CAMTA1Q9Y6Y1 1673 aa36.98■■■■□ 3.51
CCM2-218ENST00000541586 CSB-PGBD3P0DP91 1061 aa36.96■■■■□ 3.51
CCM2-218ENST00000541586 ANKRD24Q8TF21 1146 aa36.96■■■■□ 3.51
CCM2-218ENST00000541586 PHF23Q9BUL5 403 aaPredicted RBP36.96■■■■□ 3.51
CCM2-218ENST00000541586 RTL1A6NKG5 1358 aa36.96■■■■□ 3.51
CCM2-218ENST00000541586 PEAK1Q9H792 1746 aa36.95■■■■□ 3.51
CCM2-218ENST00000541586 UNC5CLQ8IV45 518 aa36.95■■■■□ 3.51
CCM2-218ENST00000541586 COL18A1P39060 1754 aa36.95■■■■□ 3.51
CCM2-218ENST00000541586 SLIT2O94813 1529 aa36.94■■■■□ 3.5
CCM2-218ENST00000541586 KIF24Q5T7B8 1368 aa36.94■■■■□ 3.5
CCM2-218ENST00000541586 RGPD5Q99666 1765 aa36.93■■■■□ 3.5
CCM2-218ENST00000541586 CCDC9Q9Y3X0 531 aaKnown RBP36.91■■■■□ 3.5
CCM2-218ENST00000541586 PLCH1Q4KWH8 1693 aa36.91■■■■□ 3.5
CCM2-218ENST00000541586 LMO7Q8WWI1 1683 aa36.91■■■■□ 3.5
CCM2-218ENST00000541586 LARP1Q6PKG0 1096 aaKnown RBP36.9■■■■□ 3.5
CCM2-218ENST00000541586 BCL9LQ86UU0 1499 aa36.9■■■■□ 3.5
CCM2-218ENST00000541586 SMG6Q86US8 1419 aaKnown RBP36.9■■■■□ 3.5
CCM2-218ENST00000541586 ERBB3P21860 1342 aa36.89■■■■□ 3.5
CCM2-218ENST00000541586 SENP3-EIF4A1A0A087X0R7 540 aa36.89■■■■□ 3.5
CCM2-218ENST00000541586 COL5A2P05997 1499 aaPredicted RBP36.88■■■■□ 3.5
CCM2-218ENST00000541586 TOM1L2Q6ZVM7 507 aa36.88■■■■□ 3.49
CCM2-218ENST00000541586 EIF4A2Q14240 407 aaKnown RBP36.88■■■■□ 3.49
CCM2-218ENST00000541586 USP35Q9P2H5 1018 aa36.88■■■■□ 3.49
CCM2-218ENST00000541586 COL3A1P02461 1466 aaPredicted RBP36.87■■■■□ 3.49
CCM2-218ENST00000541586 NLRP2Q9NX02 1062 aa36.86■■■■□ 3.49
CCM2-218ENST00000541586 CDK12Q9NYV4 1490 aaPredicted RBP36.86■■■■□ 3.49
CCM2-218ENST00000541586 ZNF772Q68DY9 489 aaPredicted RBP36.85■■■■□ 3.49
CCM2-218ENST00000541586 QTRT2Q9H974 415 aaKnown RBP36.85■■■■□ 3.49
CCM2-218ENST00000541586 ABCC6O95255 1503 aa36.85■■■■□ 3.49
CCM2-218ENST00000541586 WDR17Q8IZU2 1322 aa36.84■■■■□ 3.49
CCM2-218ENST00000541586 DIAPH1O60610 1272 aaKnown RBP36.84■■■■□ 3.49
CCM2-218ENST00000541586 NWD2Q9ULI1 1742 aa36.83■■■■□ 3.49
CCM2-218ENST00000541586 TRPC5Q9UL62 973 aaPredicted RBP36.82■■■■□ 3.48
CCM2-218ENST00000541586 RGS17Q9UGC6 210 aaPredicted RBP36.81■■■■□ 3.48
CCM2-218ENST00000541586 VPS72Q15906 364 aa36.8■■■■□ 3.48
CCM2-218ENST00000541586 IL13P35225 146 aa36.79■■■■□ 3.48
CCM2-218ENST00000541586 NBPF6Q5VWK0 638 aa36.79■■■■□ 3.48
CCM2-218ENST00000541586 NBPF4Q96M43 638 aa36.79■■■■□ 3.48
CCM2-218ENST00000541586 USHBP1Q8N6Y0 703 aa36.78■■■■□ 3.48
CCM2-218ENST00000541586 NRAPQ86VF7 1730 aa36.77■■■■□ 3.48
CCM2-218ENST00000541586 U2SURPO15042 1029 aaKnown RBP36.77■■■■□ 3.48
CCM2-218ENST00000541586 EYA1Q99502 592 aa36.77■■■■□ 3.48
CCM2-218ENST00000541586 CCDC146Q8IYE0 955 aa36.76■■■■□ 3.48
CCM2-218ENST00000541586 CRB1P82279 1406 aa36.75■■■■□ 3.47
CCM2-218ENST00000541586 NUDCQ9Y266 331 aa36.75■■■■□ 3.47
CCM2-218ENST00000541586 CARD10Q9BWT7 1032 aa36.74■■■■□ 3.47
CCM2-218ENST00000541586 SALL2Q9Y467 1007 aaPredicted RBP36.74■■■■□ 3.47
CCM2-218ENST00000541586 SPATA31A5Q5VU36 1347 aa36.74■■■■□ 3.47
CCM2-218ENST00000541586 SPATA31A7Q8IWB4 1347 aa36.74■■■■□ 3.47
CCM2-218ENST00000541586 GJD4Q96KN9 370 aaPredicted RBP36.73■■■■□ 3.47
CCM2-218ENST00000541586 SPATA31A1Q5TZJ5 1347 aa36.72■■■■□ 3.47
CCM2-218ENST00000541586 U2AF1L5P0DN76 240 aaPredicted RBP36.71■■■■□ 3.47
CCM2-218ENST00000541586 U2AF1Q01081 240 aaKnown RBP eCLIP36.71■■■■□ 3.47
CCM2-218ENST00000541586 POTEAQ6S8J7 498 aa36.71■■■■□ 3.47
CCM2-218ENST00000541586 ATRNO75882 1429 aa36.7■■■■□ 3.47
CCM2-218ENST00000541586 TCP11L2Q8N4U5 519 aa36.7■■■■□ 3.47
CCM2-218ENST00000541586 RGPD2P0DJD1 1756 aa36.69■■■■□ 3.46
CCM2-218ENST00000541586 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.69■■■■□ 3.46
CCM2-218ENST00000541586 HMOX1P09601 288 aa36.67■■■■□ 3.46
CCM2-218ENST00000541586 FAM98CQ17RN3 349 aaKnown RBP36.67■■■■□ 3.46
CCM2-218ENST00000541586 SULT6B1Q6IMI4 303 aa36.67■■■■□ 3.46
CCM2-218ENST00000541586 APAF1O14727 1248 aa36.65■■■■□ 3.46
CCM2-218ENST00000541586 RUNDC1Q96C34 613 aa36.65■■■■□ 3.46
CCM2-218ENST00000541586 RXRBP28702 533 aa36.64■■■■□ 3.46
CCM2-218ENST00000541586 AEBP1Q8IUX7 1158 aa36.64■■■■□ 3.46
CCM2-218ENST00000541586 IGSF1Q8N6C5 1336 aa36.64■■■■□ 3.46
CCM2-218ENST00000541586 A0A0G2JS52 829 aa36.63■■■■□ 3.45
CCM2-218ENST00000541586 RBM6P78332 1123 aaKnown RBP36.63■■■■□ 3.45
CCM2-218ENST00000541586 MYT1Q01538 1121 aa36.63■■■■□ 3.45
CCM2-218ENST00000541586 THRAP3Q9Y2W1 955 aaKnown RBP36.63■■■■□ 3.45
CCM2-218ENST00000541586 FAM208AQ9UK61 1670 aaKnown RBP36.59■■■■□ 3.45
CCM2-218ENST00000541586 RAPGEF4Q8WZA2 1011 aa36.59■■■■□ 3.45
CCM2-218ENST00000541586 IL2RBP14784 551 aa36.57■■■■□ 3.45
CCM2-218ENST00000541586 PDE3BQ13370 1112 aa36.57■■■■□ 3.45
CCM2-218ENST00000541586 BARGINQ6ZT62 677 aa36.57■■■■□ 3.45
CCM2-218ENST00000541586 GTF3C3Q9Y5Q9 886 aa36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms