RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 GJD4Q96KN9 370 aaPredicted RBP16.13■□□□□ 0.17
TRIT1-215ENST00000541099 COL5A2P05997 1499 aaPredicted RBP16.12■□□□□ 0.17
TRIT1-215ENST00000541099 RXRBP28702 533 aa16.12■□□□□ 0.17
TRIT1-215ENST00000541099 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
TRIT1-215ENST00000541099 RRS1Q15050 365 aaKnown RBP16.12■□□□□ 0.17
TRIT1-215ENST00000541099 LARP1Q6PKG0 1096 aaKnown RBP16.12■□□□□ 0.17
TRIT1-215ENST00000541099 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
TRIT1-215ENST00000541099 MAP3K19Q56UN5 1328 aa16.12■□□□□ 0.17
TRIT1-215ENST00000541099 KIF20BQ96Q89 1820 aa16.11■□□□□ 0.17
TRIT1-215ENST00000541099 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
TRIT1-215ENST00000541099 RGS12O14924 1447 aa16.11■□□□□ 0.17
TRIT1-215ENST00000541099 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
TRIT1-215ENST00000541099 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
TRIT1-215ENST00000541099 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.16
TRIT1-215ENST00000541099 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.16
TRIT1-215ENST00000541099 IP6K1Q92551 441 aa16.07■□□□□ 0.16
TRIT1-215ENST00000541099 KNSTRNQ9Y448 316 aa16.07■□□□□ 0.16
TRIT1-215ENST00000541099 CDK12Q9NYV4 1490 aaPredicted RBP16.07■□□□□ 0.16
TRIT1-215ENST00000541099 PEAK1Q9H792 1746 aa16.07■□□□□ 0.16
TRIT1-215ENST00000541099 RGPD5Q99666 1765 aa16.06■□□□□ 0.16
TRIT1-215ENST00000541099 ABCC6O95255 1503 aa16.06■□□□□ 0.16
TRIT1-215ENST00000541099 ONECUT3O60422 494 aaPredicted RBP16.06■□□□□ 0.16
TRIT1-215ENST00000541099 HOXC9P31274 260 aa16.06■□□□□ 0.16
TRIT1-215ENST00000541099 EVA1CP58658 441 aa16.06■□□□□ 0.16
TRIT1-215ENST00000541099 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
TRIT1-215ENST00000541099 LTN1O94822 1766 aa16.05■□□□□ 0.16
TRIT1-215ENST00000541099 NSD2O96028 1365 aa16.05■□□□□ 0.16
TRIT1-215ENST00000541099 TNNT2P45379 298 aaPredicted RBP16.05■□□□□ 0.16
TRIT1-215ENST00000541099 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
TRIT1-215ENST00000541099 ERBB3P21860 1342 aa16.04■□□□□ 0.16
TRIT1-215ENST00000541099 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
TRIT1-215ENST00000541099 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
TRIT1-215ENST00000541099 HSP90AB2PQ58FF8 381 aa16.04■□□□□ 0.16
TRIT1-215ENST00000541099 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
TRIT1-215ENST00000541099 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
TRIT1-215ENST00000541099 ANKRD24Q8TF21 1146 aa16.03■□□□□ 0.16
TRIT1-215ENST00000541099 CRB1P82279 1406 aa16.02■□□□□ 0.16
TRIT1-215ENST00000541099 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.16
TRIT1-215ENST00000541099 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.16
TRIT1-215ENST00000541099 AMPHP49418 695 aa16.02■□□□□ 0.16
TRIT1-215ENST00000541099 SEPT12Q8IYM1 358 aa16.02■□□□□ 0.16
TRIT1-215ENST00000541099 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.15
TRIT1-215ENST00000541099 RTL1A6NKG5 1358 aa16.01■□□□□ 0.15
TRIT1-215ENST00000541099 TOM1L2Q6ZVM7 507 aa16.01■□□□□ 0.15
TRIT1-215ENST00000541099 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
TRIT1-215ENST00000541099 TCP11L2Q8N4U5 519 aa16.01■□□□□ 0.15
TRIT1-215ENST00000541099 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
TRIT1-215ENST00000541099 THSD7AQ9UPZ6 1657 aa16■□□□□ 0.15
TRIT1-215ENST00000541099 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
TRIT1-215ENST00000541099 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
TRIT1-215ENST00000541099 BARGINQ6ZT62 677 aa16■□□□□ 0.15
TRIT1-215ENST00000541099 CARD10Q9BWT7 1032 aa16■□□□□ 0.15
TRIT1-215ENST00000541099 CSB-PGBD3P0DP91 1061 aa15.99■□□□□ 0.15
TRIT1-215ENST00000541099 DISP2A7MBM2 1401 aa15.99■□□□□ 0.15
TRIT1-215ENST00000541099 SMG6Q86US8 1419 aaKnown RBP15.99■□□□□ 0.15
TRIT1-215ENST00000541099 INSRP06213 1382 aa15.99■□□□□ 0.15
TRIT1-215ENST00000541099 FLT4P35916 1363 aa15.99■□□□□ 0.15
TRIT1-215ENST00000541099 KIF24Q5T7B8 1368 aa15.98■□□□□ 0.15
TRIT1-215ENST00000541099 PPM1GO15355 546 aaPredicted RBP15.97■□□□□ 0.15
TRIT1-215ENST00000541099 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
TRIT1-215ENST00000541099 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
TRIT1-215ENST00000541099 SOCS7O14512 581 aa15.96■□□□□ 0.15
TRIT1-215ENST00000541099 NLRP2Q9NX02 1062 aa15.96■□□□□ 0.15
TRIT1-215ENST00000541099 THRAP3Q9Y2W1 955 aaKnown RBP15.96■□□□□ 0.15
TRIT1-215ENST00000541099 MAP2P11137 1827 aaKnown RBP15.96■□□□□ 0.14
TRIT1-215ENST00000541099 FAM182BQ5T319 152 aa15.95■□□□□ 0.14
TRIT1-215ENST00000541099 BRWD3Q6RI45 1802 aa15.95■□□□□ 0.14
TRIT1-215ENST00000541099 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
TRIT1-215ENST00000541099 EIF4A2Q14240 407 aaKnown RBP15.94■□□□□ 0.14
TRIT1-215ENST00000541099 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
TRIT1-215ENST00000541099 FAM208AQ9UK61 1670 aaKnown RBP15.94■□□□□ 0.14
TRIT1-215ENST00000541099 RGPD2P0DJD1 1756 aa15.93■□□□□ 0.14
TRIT1-215ENST00000541099 EP400Q96L91 3159 aa15.93■□□□□ 0.14
TRIT1-215ENST00000541099 MTHFSP49914 203 aa15.93■□□□□ 0.14
TRIT1-215ENST00000541099 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
TRIT1-215ENST00000541099 A0A0G2JS52 829 aa15.92■□□□□ 0.14
TRIT1-215ENST00000541099 MYT1Q01538 1121 aa15.92■□□□□ 0.14
TRIT1-215ENST00000541099 KRT27Q7Z3Y8 459 aa15.92■□□□□ 0.14
TRIT1-215ENST00000541099 EYA1Q99502 592 aa15.92■□□□□ 0.14
TRIT1-215ENST00000541099 NCAPD2Q15021 1401 aa15.92■□□□□ 0.14
TRIT1-215ENST00000541099 MEGF6O75095 1541 aa15.91■□□□□ 0.14
TRIT1-215ENST00000541099 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
TRIT1-215ENST00000541099 UPF1Q92900 1129 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRIT1-215ENST00000541099 IL13P35225 146 aa15.9■□□□□ 0.14
TRIT1-215ENST00000541099 COL3A1P02461 1466 aaPredicted RBP15.9■□□□□ 0.14
TRIT1-215ENST00000541099 LRRC37A3O60309 1634 aa15.9■□□□□ 0.14
TRIT1-215ENST00000541099 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
TRIT1-215ENST00000541099 PARD3Q8TEW0 1356 aa15.89■□□□□ 0.13
TRIT1-215ENST00000541099 PARP4Q9UKK3 1724 aaKnown RBP15.89■□□□□ 0.13
TRIT1-215ENST00000541099 PPP2R1AP30153 589 aa15.89■□□□□ 0.13
TRIT1-215ENST00000541099 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.13
TRIT1-215ENST00000541099 IL2RBP14784 551 aa15.88■□□□□ 0.13
TRIT1-215ENST00000541099 DDB1Q16531 1140 aa15.87■□□□□ 0.13
TRIT1-215ENST00000541099 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
TRIT1-215ENST00000541099 IGSF1Q8N6C5 1336 aa15.87■□□□□ 0.13
TRIT1-215ENST00000541099 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
TRIT1-215ENST00000541099 TNS2Q63HR2 1409 aa15.85■□□□□ 0.13
TRIT1-215ENST00000541099 KCNA4P22459 653 aa15.85■□□□□ 0.13
TRIT1-215ENST00000541099 OVOS2A0A0G2JMS6 1433 aa15.85■□□□□ 0.13
TRIT1-215ENST00000541099 EXOC5O00471 708 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms