RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 PRAM1Q96QH2 718 aa15.64■□□□□ 0.09
DNMT1-203ENST00000540357 CHMP3Q9Y3E7 222 aa15.64■□□□□ 0.09
DNMT1-203ENST00000540357 UBTFL1P0CB47 393 aaPredicted RBP15.64■□□□□ 0.09
DNMT1-203ENST00000540357 FIBPO43427 364 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 IFIT2P09913 472 aaKnown RBP15.63■□□□□ 0.09
DNMT1-203ENST00000540357 PDCP20941 246 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 ANKRD36BQ8N2N9 1353 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 FSD2A1L4K1 749 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 PBRM1Q86U86 1689 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 TTC22Q5TAA0 569 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 PSMA5P28066 241 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 UVSSAQ2YD98 709 aa15.63■□□□□ 0.09
DNMT1-203ENST00000540357 SF3A1Q15459 793 aaKnown RBP15.62■□□□□ 0.09
DNMT1-203ENST00000540357 TPD52L1Q16890 204 aaPredicted RBP15.62■□□□□ 0.09
DNMT1-203ENST00000540357 CCDC183Q5T5S1 534 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 TRIM5Q9C035 493 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 ZBTB40Q9NUA8 1239 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 ZKSCAN5Q9Y2L8 839 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 TERF1P54274 439 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 TEX35Q5T0J7 233 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 PRIMPOLQ96LW4 560 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 CDK19Q9BWU1 502 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 CABP1Q9NZU7 370 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 CCDC66A2RUB6 948 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 PDIA4P13667 645 aaKnown RBP15.62■□□□□ 0.09
DNMT1-203ENST00000540357 CCDC30Q5VVM6 783 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 CARD14Q9BXL6 1004 aa15.62■□□□□ 0.09
DNMT1-203ENST00000540357 C14orf93Q9H972 538 aaKnown RBP15.61■□□□□ 0.09
DNMT1-203ENST00000540357 POLR1AO95602 1720 aaPredicted RBP15.61■□□□□ 0.09
DNMT1-203ENST00000540357 PDCL2Q8N4E4 241 aa15.61■□□□□ 0.09
DNMT1-203ENST00000540357 MLECQ14165 292 aa15.6■□□□□ 0.09
DNMT1-203ENST00000540357 ANTXR1Q9H6X2 564 aa15.6■□□□□ 0.09
DNMT1-203ENST00000540357 CEP170Q5SW79 1584 aa15.6■□□□□ 0.09
DNMT1-203ENST00000540357 NOS1P29475 1434 aa15.6■□□□□ 0.09
DNMT1-203ENST00000540357 SPC24Q8NBT2 197 aa15.6■□□□□ 0.09
DNMT1-203ENST00000540357 GAS2L2Q8NHY3 880 aa15.6■□□□□ 0.09
DNMT1-203ENST00000540357 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
DNMT1-203ENST00000540357 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
DNMT1-203ENST00000540357 ARGLU1Q9NWB6 273 aaPredicted RBP15.59■□□□□ 0.09
DNMT1-203ENST00000540357 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
DNMT1-203ENST00000540357 TAOK2Q9UL54 1235 aa15.59■□□□□ 0.09
DNMT1-203ENST00000540357 CCDC73Q6ZRK6 1079 aa15.58■□□□□ 0.09
DNMT1-203ENST00000540357 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
DNMT1-203ENST00000540357 TAF3Q5VWG9 929 aa15.58■□□□□ 0.09
DNMT1-203ENST00000540357 ZSCAN31Q96LW9 406 aaPredicted RBP15.58■□□□□ 0.09
DNMT1-203ENST00000540357 NAT10Q9H0A0 1025 aaKnown RBP15.58■□□□□ 0.09
DNMT1-203ENST00000540357 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.09
DNMT1-203ENST00000540357 RBM27Q9P2N5 1060 aaKnown RBP15.58■□□□□ 0.09
DNMT1-203ENST00000540357 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.08
DNMT1-203ENST00000540357 ARHGEF5Q12774 1597 aa15.58■□□□□ 0.08
DNMT1-203ENST00000540357 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
DNMT1-203ENST00000540357 CCDC112Q8NEF3 446 aa15.58■□□□□ 0.08
DNMT1-203ENST00000540357 CCDC34Q96HJ3 373 aa15.58■□□□□ 0.08
DNMT1-203ENST00000540357 SURF6O75683 361 aaKnown RBP15.57■□□□□ 0.08
DNMT1-203ENST00000540357 C9orf78Q9NZ63 289 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-203ENST00000540357 NOL7Q9UMY1 257 aaKnown RBP15.57■□□□□ 0.08
DNMT1-203ENST00000540357 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 KRT85P78386 507 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 KDM5DQ9BY66 1539 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 HIP1O00291 1037 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 MPNDQ8N594 471 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 SYNMO15061 1565 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 CYP46A1Q9Y6A2 500 aa15.57■□□□□ 0.08
DNMT1-203ENST00000540357 GPS2Q13227 327 aa15.56■□□□□ 0.08
DNMT1-203ENST00000540357 GOLGA6L1Q8N7Z2 621 aa15.56■□□□□ 0.08
DNMT1-203ENST00000540357 PRDM15P57071 1507 aaPredicted RBP15.56■□□□□ 0.08
DNMT1-203ENST00000540357 MX1P20591 662 aa15.56■□□□□ 0.08
DNMT1-203ENST00000540357 ZNF445P59923 1031 aa15.56■□□□□ 0.08
DNMT1-203ENST00000540357 THUMPD2Q9BTF0 503 aaKnown RBP15.56■□□□□ 0.08
DNMT1-203ENST00000540357 TNMDQ9H2S6 317 aa15.56■□□□□ 0.08
DNMT1-203ENST00000540357 SMARCA5O60264 1052 aaPredicted RBP15.55■□□□□ 0.08
DNMT1-203ENST00000540357 PRIM1P49642 420 aaKnown RBP15.55■□□□□ 0.08
DNMT1-203ENST00000540357 HOMER1Q86YM7 354 aa15.55■□□□□ 0.08
DNMT1-203ENST00000540357 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
DNMT1-203ENST00000540357 CLASRPQ8N2M8 674 aaKnown RBP15.55■□□□□ 0.08
DNMT1-203ENST00000540357 PTPRCP08575 1304 aa15.55■□□□□ 0.08
DNMT1-203ENST00000540357 G3BP1Q13283 466 aaKnown RBP eCLIP15.55■□□□□ 0.083e-8■□□□□ 9.4
DNMT1-203ENST00000540357 DHX8Q14562 1220 aaKnown RBP15.55■□□□□ 0.08
DNMT1-203ENST00000540357 PLCH2O75038 1416 aa15.54■□□□□ 0.08
DNMT1-203ENST00000540357 ANKRD1Q15327 319 aa15.54■□□□□ 0.08
DNMT1-203ENST00000540357 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
DNMT1-203ENST00000540357 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
DNMT1-203ENST00000540357 NUP62CLQ9H1M0 184 aa15.54■□□□□ 0.08
DNMT1-203ENST00000540357 USP25Q9UHP3 1055 aa15.54■□□□□ 0.08
DNMT1-203ENST00000540357 SULT6B1Q6IMI4 303 aa15.54■□□□□ 0.08
DNMT1-203ENST00000540357 PPP1R9BQ96SB3 815 aa15.53■□□□□ 0.08
DNMT1-203ENST00000540357 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
DNMT1-203ENST00000540357 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
DNMT1-203ENST00000540357 RTEL1-TNFRSF6BF6WH68 1400 aa15.53■□□□□ 0.08
DNMT1-203ENST00000540357 ADCY5O95622 1261 aa15.53■□□□□ 0.08
DNMT1-203ENST00000540357 TMX3Q96JJ7 454 aa15.53■□□□□ 0.08
DNMT1-203ENST00000540357 SDSP20132 328 aa15.52■□□□□ 0.08
DNMT1-203ENST00000540357 CBX1P83916 185 aa15.52■□□□□ 0.08
DNMT1-203ENST00000540357 MAP3K11Q16584 847 aa15.52■□□□□ 0.08
DNMT1-203ENST00000540357 ERC1Q8IUD2 1116 aa15.52■□□□□ 0.08
DNMT1-203ENST00000540357 MNS1Q8NEH6 495 aa15.52■□□□□ 0.08
DNMT1-203ENST00000540357 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.08
DNMT1-203ENST00000540357 MBIPQ9NS73 344 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms