RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 ABCC6O95255 1503 aa30.31■■■□□ 2.44
TRIM65-202ENST00000540128 SPATA31A5Q5VU36 1347 aa30.3■■■□□ 2.44
TRIM65-202ENST00000540128 SPATA31A7Q8IWB4 1347 aa30.3■■■□□ 2.44
TRIM65-202ENST00000540128 NSD2O96028 1365 aa30.29■■■□□ 2.44
TRIM65-202ENST00000540128 ONECUT3O60422 494 aaPredicted RBP30.28■■■□□ 2.44
TRIM65-202ENST00000540128 FBLN1P23142 703 aa30.28■■■□□ 2.44
TRIM65-202ENST00000540128 AMER1Q5JTC6 1135 aaPredicted RBP30.28■■■□□ 2.44
TRIM65-202ENST00000540128 STRN4Q9NRL3 753 aa30.28■■■□□ 2.44
TRIM65-202ENST00000540128 MAP3K19Q56UN5 1328 aa30.27■■■□□ 2.44
TRIM65-202ENST00000540128 COL5A2P05997 1499 aaPredicted RBP30.27■■■□□ 2.44
TRIM65-202ENST00000540128 IP6K1Q92551 441 aa30.26■■■□□ 2.43
TRIM65-202ENST00000540128 GLI3P10071 1580 aa30.25■■■□□ 2.43
TRIM65-202ENST00000540128 LARP1Q6PKG0 1096 aaKnown RBP30.25■■■□□ 2.43
TRIM65-202ENST00000540128 CCDC9Q9Y3X0 531 aaKnown RBP30.25■■■□□ 2.43
TRIM65-202ENST00000540128 SPATA31A1Q5TZJ5 1347 aa30.24■■■□□ 2.43
TRIM65-202ENST00000540128 WDR17Q8IZU2 1322 aa30.22■■■□□ 2.43
TRIM65-202ENST00000540128 LTN1O94822 1766 aa30.21■■■□□ 2.43
TRIM65-202ENST00000540128 NPC1L1Q9UHC9 1359 aa30.21■■■□□ 2.43
TRIM65-202ENST00000540128 RRS1Q15050 365 aaKnown RBP30.21■■■□□ 2.43
TRIM65-202ENST00000540128 RGS12O14924 1447 aa30.21■■■□□ 2.43
TRIM65-202ENST00000540128 KIF24Q5T7B8 1368 aa30.2■■■□□ 2.43
TRIM65-202ENST00000540128 AMPHP49418 695 aa30.2■■■□□ 2.43
TRIM65-202ENST00000540128 BLMP54132 1417 aaPredicted RBP30.2■■■□□ 2.42
TRIM65-202ENST00000540128 RTL1A6NKG5 1358 aa30.19■■■□□ 2.42
TRIM65-202ENST00000540128 HOXC9P31274 260 aa30.19■■■□□ 2.42
TRIM65-202ENST00000540128 CRB1P82279 1406 aa30.19■■■□□ 2.42
TRIM65-202ENST00000540128 ANKRD26Q9UPS8 1709 aa30.18■■■□□ 2.42
TRIM65-202ENST00000540128 ERBB3P21860 1342 aa30.18■■■□□ 2.42
TRIM65-202ENST00000540128 BARGINQ6ZT62 677 aa30.17■■■□□ 2.42
TRIM65-202ENST00000540128 MORC1Q86VD1 984 aa30.17■■■□□ 2.42
TRIM65-202ENST00000540128 THRAP3Q9Y2W1 955 aaKnown RBP30.17■■■□□ 2.42
TRIM65-202ENST00000540128 RGPD5Q99666 1765 aa30.16■■■□□ 2.42
TRIM65-202ENST00000540128 TCP11L2Q8N4U5 519 aa30.16■■■□□ 2.42
TRIM65-202ENST00000540128 TOM1L2Q6ZVM7 507 aa30.15■■■□□ 2.42
TRIM65-202ENST00000540128 CARD10Q9BWT7 1032 aa30.15■■■□□ 2.42
TRIM65-202ENST00000540128 POLKQ9UBT6 870 aa30.15■■■□□ 2.42
TRIM65-202ENST00000540128 CSB-PGBD3P0DP91 1061 aa30.14■■■□□ 2.42
TRIM65-202ENST00000540128 FAM98CQ17RN3 349 aaKnown RBP30.14■■■□□ 2.42
TRIM65-202ENST00000540128 SEPT12Q8IYM1 358 aa30.14■■■□□ 2.42
TRIM65-202ENST00000540128 ANKRD24Q8TF21 1146 aa30.14■■■□□ 2.42
TRIM65-202ENST00000540128 EMILIN1Q9Y6C2 1016 aa30.13■■■□□ 2.41
TRIM65-202ENST00000540128 USP35Q9P2H5 1018 aa30.12■■■□□ 2.41
TRIM65-202ENST00000540128 FLT4P35916 1363 aa30.12■■■□□ 2.41
TRIM65-202ENST00000540128 TNNT2P45379 298 aaPredicted RBP30.1■■■□□ 2.41
TRIM65-202ENST00000540128 HSP90AB2PQ58FF8 381 aa30.1■■■□□ 2.41
TRIM65-202ENST00000540128 INSRP06213 1382 aa30.1■■■□□ 2.41
TRIM65-202ENST00000540128 CC2D1BQ5T0F9 858 aaKnown RBP30.08■■■□□ 2.41
TRIM65-202ENST00000540128 MAP2P11137 1827 aaKnown RBP30.08■■■□□ 2.41
TRIM65-202ENST00000540128 NLRP2Q9NX02 1062 aa30.07■■■□□ 2.4
TRIM65-202ENST00000540128 PEAK1Q9H792 1746 aa30.07■■■□□ 2.4
TRIM65-202ENST00000540128 THSD7AQ9UPZ6 1657 aa30.05■■■□□ 2.4
TRIM65-202ENST00000540128 LTV1Q96GA3 475 aaPredicted RBP30.05■■■□□ 2.4
TRIM65-202ENST00000540128 SMG6Q86US8 1419 aaKnown RBP30.05■■■□□ 2.4
TRIM65-202ENST00000540128 PPM1GO15355 546 aaPredicted RBP30.04■■■□□ 2.4
TRIM65-202ENST00000540128 CDCA7Q9BWT1 371 aaPredicted RBP30.04■■■□□ 2.4
TRIM65-202ENST00000540128 DDX10Q13206 875 aaKnown RBP30.02■■■□□ 2.4
TRIM65-202ENST00000540128 A0A0G2JS52 829 aa30■■■□□ 2.39
TRIM65-202ENST00000540128 MYT1Q01538 1121 aa30■■■□□ 2.39
TRIM65-202ENST00000540128 KRT27Q7Z3Y8 459 aa30■■■□□ 2.39
TRIM65-202ENST00000540128 DISP2A7MBM2 1401 aa29.99■■■□□ 2.39
TRIM65-202ENST00000540128 ZNF316A6NFI3 1004 aaPredicted RBP29.98■■■□□ 2.39
TRIM65-202ENST00000540128 NBPF6Q5VWK0 638 aa29.98■■■□□ 2.39
TRIM65-202ENST00000540128 NBPF4Q96M43 638 aa29.98■■■□□ 2.39
TRIM65-202ENST00000540128 FAM208AQ9UK61 1670 aaKnown RBP29.98■■■□□ 2.39
TRIM65-202ENST00000540128 BRWD3Q6RI45 1802 aa29.97■■■□□ 2.39
TRIM65-202ENST00000540128 IL2RBP14784 551 aa29.94■■■□□ 2.38
TRIM65-202ENST00000540128 MTHFSP49914 203 aa29.94■■■□□ 2.38
TRIM65-202ENST00000540128 EIF4A2Q14240 407 aaKnown RBP29.93■■■□□ 2.38
TRIM65-202ENST00000540128 PARP4Q9UKK3 1724 aaKnown RBP29.93■■■□□ 2.38
TRIM65-202ENST00000540128 PDE3BQ13370 1112 aa29.91■■■□□ 2.38
TRIM65-202ENST00000540128 CNGB1Q14028 1251 aaPredicted RBP29.91■■■□□ 2.38
TRIM65-202ENST00000540128 DDB1Q16531 1140 aa29.91■■■□□ 2.38
TRIM65-202ENST00000540128 EYA1Q99502 592 aa29.9■■■□□ 2.38
TRIM65-202ENST00000540128 NCAPD2Q15021 1401 aa29.89■■■□□ 2.38
TRIM65-202ENST00000540128 UPF1Q92900 1129 aaKnown RBP eCLIP29.89■■■□□ 2.38
TRIM65-202ENST00000540128 WNK3Q9BYP7 1800 aa29.89■■■□□ 2.38
TRIM65-202ENST00000540128 RGPD2P0DJD1 1756 aa29.88■■■□□ 2.37
TRIM65-202ENST00000540128 EXOC5O00471 708 aa29.88■■■□□ 2.37
TRIM65-202ENST00000540128 PARD3Q8TEW0 1356 aa29.87■■■□□ 2.37
TRIM65-202ENST00000540128 PPP2R1AP30153 589 aa29.85■■■□□ 2.37
TRIM65-202ENST00000540128 IL13P35225 146 aa29.85■■■□□ 2.37
TRIM65-202ENST00000540128 USHBP1Q8N6Y0 703 aa29.85■■■□□ 2.37
TRIM65-202ENST00000540128 FAM196AQ6ZSG2 479 aa29.84■■■□□ 2.37
TRIM65-202ENST00000540128 LRRC37A3O60309 1634 aa29.84■■■□□ 2.37
TRIM65-202ENST00000540128 IGSF1Q8N6C5 1336 aa29.83■■■□□ 2.37
TRIM65-202ENST00000540128 FAM182BQ5T319 152 aa29.82■■■□□ 2.36
TRIM65-202ENST00000540128 CCDC125Q86Z20 511 aa29.82■■■□□ 2.36
TRIM65-202ENST00000540128 MARCH10Q8NA82 808 aaPredicted RBP29.82■■■□□ 2.36
TRIM65-202ENST00000540128 TNS2Q63HR2 1409 aa29.81■■■□□ 2.36
TRIM65-202ENST00000540128 RALBP1Q15311 655 aa29.81■■■□□ 2.36
TRIM65-202ENST00000540128 RAPGEF4Q8WZA2 1011 aa29.81■■■□□ 2.36
TRIM65-202ENST00000540128 MEGF6O75095 1541 aa29.8■■■□□ 2.36
TRIM65-202ENST00000540128 OVOS2A0A0G2JMS6 1433 aa29.79■■■□□ 2.36
TRIM65-202ENST00000540128 BCL9O00512 1426 aa29.79■■■□□ 2.36
TRIM65-202ENST00000540128 TATP17735 454 aaPredicted RBP29.78■■■□□ 2.36
TRIM65-202ENST00000540128 DIAPH1O60610 1272 aaKnown RBP29.77■■■□□ 2.36
TRIM65-202ENST00000540128 ZCRB1Q8TBF4 217 aaKnown RBP29.77■■■□□ 2.36
TRIM65-202ENST00000540128 COL3A1P02461 1466 aaPredicted RBP29.76■■■□□ 2.35
TRIM65-202ENST00000540128 PLEKHG2Q9H7P9 1386 aa29.75■■■□□ 2.35
TRIM65-202ENST00000540128 CFAP53Q96M91 514 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms