RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 RB1CC1Q8TDY2 1594 aa6.57□□□□□ -1.36
AC055720.1-201ENST00000539552 MOXD2PA6NHM9 499 aa6.57□□□□□ -1.36
AC055720.1-201ENST00000539552 SSTR3P32745 418 aaPredicted RBP6.57□□□□□ -1.36
AC055720.1-201ENST00000539552 DIXDC1Q155Q3 683 aa6.57□□□□□ -1.36
AC055720.1-201ENST00000539552 LYPD8Q6UX82 237 aa6.57□□□□□ -1.36
AC055720.1-201ENST00000539552 ILDR2Q71H61 639 aa6.57□□□□□ -1.36
AC055720.1-201ENST00000539552 CCDC116Q8IYX3 515 aa6.57□□□□□ -1.36
AC055720.1-201ENST00000539552 SLURP2P0DP57 97 aa6.56□□□□□ -1.36
AC055720.1-201ENST00000539552 GRM5P41594 1212 aa6.56□□□□□ -1.36
AC055720.1-201ENST00000539552 TTLL12Q14166 644 aaPredicted RBP6.56□□□□□ -1.36
AC055720.1-201ENST00000539552 VWA5B2Q8N398 1253 aa6.56□□□□□ -1.36
AC055720.1-201ENST00000539552 ARHGEF15O94989 841 aa6.55□□□□□ -1.36
AC055720.1-201ENST00000539552 ITGA6P23229 1130 aa6.55□□□□□ -1.36
AC055720.1-201ENST00000539552 RNFT1Q5M7Z0 435 aa6.55□□□□□ -1.36
AC055720.1-201ENST00000539552 NBPF14Q5TI25 921 aa6.55□□□□□ -1.36
AC055720.1-201ENST00000539552 TSC1Q92574 1164 aa6.55□□□□□ -1.36
AC055720.1-201ENST00000539552 MAP10Q9P2G4 905 aa6.55□□□□□ -1.36
AC055720.1-201ENST00000539552 ADAM23O75077 832 aa6.54□□□□□ -1.36
AC055720.1-201ENST00000539552 WHAMMQ8TF30 809 aa6.54□□□□□ -1.36
AC055720.1-201ENST00000539552 MAGEB6P1A0A0J9YX57 407 aa6.53□□□□□ -1.36
AC055720.1-201ENST00000539552 ADAMTS2O95450 1211 aa6.53□□□□□ -1.36
AC055720.1-201ENST00000539552 NPM2Q86SE8 214 aaKnown RBP6.53□□□□□ -1.36
AC055720.1-201ENST00000539552 ZBTB3Q9H5J0 574 aa6.53□□□□□ -1.36
AC055720.1-201ENST00000539552 MAP4K5Q9Y4K4 846 aa6.53□□□□□ -1.36
AC055720.1-201ENST00000539552 BEND7Q8N7W2 519 aaPredicted RBP6.52□□□□□ -1.37
AC055720.1-201ENST00000539552 NEDD1Q8NHV4 660 aa6.52□□□□□ -1.37
AC055720.1-201ENST00000539552 SLC35F4A4IF30 521 aa6.51□□□□□ -1.37
AC055720.1-201ENST00000539552 SRSF11Q05519 484 aaKnown RBP6.51□□□□□ -1.37
AC055720.1-201ENST00000539552 PLA2G4EQ3MJ16 856 aa6.51□□□□□ -1.37
AC055720.1-201ENST00000539552 POLMQ9NP87 494 aaPredicted RBP6.51□□□□□ -1.37
AC055720.1-201ENST00000539552 SPINT1O43278 529 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 F12P00748 615 aaPredicted RBP6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 GJA5P36382 358 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 DHX9Q08211 1270 aaKnown RBP6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 FOXR1Q6PIV2 292 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 SPOCK3Q9BQ16 436 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 RIMBP3CA6NJZ7 1639 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 RIMBP3BA6NNM3 1639 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 RIMBP3Q9UFD9 1639 aa6.5□□□□□ -1.37
AC055720.1-201ENST00000539552 SUPT5HO00267 1087 aaKnown RBP6.49□□□□□ -1.37
AC055720.1-201ENST00000539552 PPP1R26Q5T8A7 1209 aaPredicted RBP6.49□□□□□ -1.37
AC055720.1-201ENST00000539552 LYPD4Q6UWN0 246 aa6.49□□□□□ -1.37
AC055720.1-201ENST00000539552 CARD14Q9BXL6 1004 aa6.49□□□□□ -1.37
AC055720.1-201ENST00000539552 NUTM2BA6NNL0 878 aaPredicted RBP6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 NUTM2EB1AL46 878 aaPredicted RBP6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 CFAP99D6REC4 459 aa6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 K7ELQ4 463 aaPredicted RBP6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 CELA2BP08218 269 aaPredicted RBP6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 NUTM2DQ5VT03 806 aaPredicted RBP6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 SH3RF1Q7Z6J0 888 aa6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 NUTM2AQ8IVF1 878 aaPredicted RBP6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 TRMT44Q8IYL2 757 aaKnown RBP6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 BEGAINQ9BUH8 593 aa6.48□□□□□ -1.37
AC055720.1-201ENST00000539552 HRCP23327 699 aa6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 RELBQ01201 579 aa6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 CBLBQ13191 982 aa6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 RSBN1LQ6PCB5 846 aaPredicted RBP6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 Q6ZVU0 165 aa6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 HELBQ8NG08 1087 aaPredicted RBP6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 DCAF5Q96JK2 942 aa6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 C1QTNF2Q9BXJ5 285 aa6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 TBC1D2Q9BYX2 928 aa6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 CDV3Q9UKY7 258 aaKnown RBP6.47□□□□□ -1.37
AC055720.1-201ENST00000539552 CSPP1Q1MSJ5 1256 aa6.46□□□□□ -1.38
AC055720.1-201ENST00000539552 PRPF38BQ5VTL8 546 aaKnown RBP6.46□□□□□ -1.38
AC055720.1-201ENST00000539552 SLC10A4Q96EP9 437 aa6.46□□□□□ -1.38
AC055720.1-201ENST00000539552 GPKOWQ92917 476 aaPredicted RBP eCLIP6.45□□□□□ -1.38
AC055720.1-201ENST00000539552 INSM2Q96T92 566 aaPredicted RBP6.45□□□□□ -1.38
AC055720.1-201ENST00000539552 CNTNAP5Q8WYK1 1306 aa6.45□□□□□ -1.38
AC055720.1-201ENST00000539552 CCDC180Q9P1Z9 1646 aa6.44□□□□□ -1.38
AC055720.1-201ENST00000539552 CTSOP43234 321 aaPredicted RBP6.44□□□□□ -1.38
AC055720.1-201ENST00000539552 TRIM26Q12899 539 aaPredicted RBP6.44□□□□□ -1.38
AC055720.1-201ENST00000539552 GIGYF2Q6Y7W6 1299 aaKnown RBP6.44□□□□□ -1.38
AC055720.1-201ENST00000539552 TRIM52Q96A61 297 aa6.44□□□□□ -1.38
AC055720.1-201ENST00000539552 MBIPQ9NS73 344 aa6.44□□□□□ -1.38
AC055720.1-201ENST00000539552 NSFL1CQ9UNZ2 370 aaKnown RBP6.44□□□□□ -1.38
AC055720.1-201ENST00000539552 RIC3Q7Z5B4 369 aa6.43□□□□□ -1.38
AC055720.1-201ENST00000539552 AGBL1Q96MI9 1066 aa6.43□□□□□ -1.38
AC055720.1-201ENST00000539552 PCDHB15Q9Y5E8 787 aa6.43□□□□□ -1.38
AC055720.1-201ENST00000539552 EIF4G1Q04637 1599 aaKnown RBP6.43□□□□□ -1.38
AC055720.1-201ENST00000539552 BCRP11274 1271 aa6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 SH3BP5LQ7L8J4 393 aa6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 ZBTB33Q86T24 672 aa6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 GMCL1Q96IK5 515 aa6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 TRERF1Q96PN7 1200 aa6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 KCTD15Q96SI1 283 aaPredicted RBP6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 ARHGAP9Q9BRR9 750 aa6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 TTBK1Q5TCY1 1321 aaPredicted RBP6.42□□□□□ -1.38
AC055720.1-201ENST00000539552 PER1O15534 1290 aaPredicted RBP6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 UBTFP17480 764 aaKnown RBP6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 ERFEQ4G0M1 354 aa6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 LYSMD3Q7Z3D4 306 aa6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 Q8N3U1 123 aa6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 RNF217Q8TC41 542 aa6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 CABLES1Q8TDN4 633 aa6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 PSMG3-AS1Q96PY0 264 aa6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 ZNF395Q9H8N7 513 aaPredicted RBP6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 ERCC6Q03468 1493 aa6.41□□□□□ -1.38
AC055720.1-201ENST00000539552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms