RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PRR36Q9H6K5 1346 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 SHPRHQ149N8 1683 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 FLT4P35916 1363 aa4.76□□□□□ -1.65
PTPN22-211ENST00000538253 NUTM2BA6NNL0 878 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-211ENST00000538253 NUTM2EB1AL46 878 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-211ENST00000538253 GCP02774 474 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 BRD2P25440 801 aaKnown RBP4.75□□□□□ -1.65
PTPN22-211ENST00000538253 CALD1Q05682 793 aaKnown RBP4.75□□□□□ -1.65
PTPN22-211ENST00000538253 LMOD3Q0VAK6 560 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 VPS72Q15906 364 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 NUTM2AQ8IVF1 878 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-211ENST00000538253 USP21Q9UK80 565 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 NSD3Q9BZ95 1437 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 FNBP4Q8N3X1 1017 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-211ENST00000538253 RAPGEF4Q8WZA2 1011 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 IP6K1Q92551 441 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 PANK3Q9H999 370 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 AMOTQ4VCS5 1084 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 SLC12A5Q9H2X9 1139 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 RNF216Q9NWF9 866 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-211ENST00000538253 KIF7Q2M1P5 1343 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 A0A1W2PP64 1363 aa4.75□□□□□ -1.65
PTPN22-211ENST00000538253 TATP17735 454 aaPredicted RBP4.74□□□□□ -1.65
PTPN22-211ENST00000538253 SPG7Q9UQ90 795 aa4.74□□□□□ -1.65
PTPN22-211ENST00000538253 COL22A1Q8NFW1 1626 aaPredicted RBP4.74□□□□□ -1.65
PTPN22-211ENST00000538253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPN22-211ENST00000538253 CARD10Q9BWT7 1032 aa4.74□□□□□ -1.65
PTPN22-211ENST00000538253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPN22-211ENST00000538253 PDE3BQ13370 1112 aa4.74□□□□□ -1.65
PTPN22-211ENST00000538253 BARGINQ6ZT62 677 aa4.74□□□□□ -1.65
PTPN22-211ENST00000538253 C8orf37Q96NL8 207 aa4.74□□□□□ -1.65
PTPN22-211ENST00000538253 COL16A1Q07092 1604 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 TOPAZ1Q8N9V7 1692 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 WDR43Q15061 677 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 PLEKHO1Q53GL0 409 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 TOM1L2Q6ZVM7 507 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 PAXIP1Q6ZW49 1069 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 TCP11L2Q8N4U5 519 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 CNKSR2Q8WXI2 1034 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 RBM33Q96EV2 1170 aaKnown RBP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 AFF2P51816 1311 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 STRCP1A6NGW2 1772 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 A0A0G2JS52 829 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 INSRP06213 1382 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 SSH2Q76I76 1423 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 COL14A1Q05707 1796 aaKnown RBP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 SLIT3O75094 1523 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 WDR17Q8IZU2 1322 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 ADAMTS2O95450 1211 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 ERICH6BQ5W0A0 696 aa4.73□□□□□ -1.65
PTPN22-211ENST00000538253 QTRT2Q9H974 415 aaKnown RBP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-211ENST00000538253 ZBTB7CA1YPR0 619 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 EXOC5O00471 708 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 DIAPH1O60610 1272 aaKnown RBP4.72□□□□□ -1.65
PTPN22-211ENST00000538253 GAS2L2Q8NHY3 880 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 OVOS2A0A0J9YW53 1432 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 CRB1P82279 1406 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 OVOS2Q6IE36 1432 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 MYBBP1AQ9BQG0 1328 aaKnown RBP4.72□□□□□ -1.65
PTPN22-211ENST00000538253 MAPK8IP3Q9UPT6 1336 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 RBM10P98175 930 aaKnown RBP4.72□□□□□ -1.65
PTPN22-211ENST00000538253 SMARCC1Q92922 1105 aaPredicted RBP4.72□□□□□ -1.65
PTPN22-211ENST00000538253 NLRP2Q9NX02 1062 aa4.72□□□□□ -1.65
PTPN22-211ENST00000538253 FYB1O15117 783 aa4.71□□□□□ -1.65
PTPN22-211ENST00000538253 FAM196AQ6ZSG2 479 aa4.71□□□□□ -1.65
PTPN22-211ENST00000538253 PARD3Q8TEW0 1356 aa4.71□□□□□ -1.66
PTPN22-211ENST00000538253 IL2RBP14784 551 aa4.71□□□□□ -1.66
PTPN22-211ENST00000538253 C1orf141Q5JVX7 400 aa4.71□□□□□ -1.66
PTPN22-211ENST00000538253 PNISRQ8TF01 805 aaKnown RBP4.71□□□□□ -1.66
PTPN22-211ENST00000538253 GJD4Q96KN9 370 aaPredicted RBP4.71□□□□□ -1.66
PTPN22-211ENST00000538253 OVOS2A0A0G2JMS6 1433 aa4.71□□□□□ -1.66
PTPN22-211ENST00000538253 KIAA0232Q92628 1395 aa4.71□□□□□ -1.66
PTPN22-211ENST00000538253 HTATSF1O43719 755 aaKnown RBP4.71□□□□□ -1.66
PTPN22-211ENST00000538253 NME9Q86XW9 330 aa4.71□□□□□ -1.66
PTPN22-211ENST00000538253 BTG4Q9NY30 223 aa4.71□□□□□ -1.66
PTPN22-211ENST00000538253 XIRP1Q702N8 1843 aaKnown RBP4.7□□□□□ -1.66
PTPN22-211ENST00000538253 DEKP35659 375 aaKnown RBP4.7□□□□□ -1.66
PTPN22-211ENST00000538253 BAG6P46379 1132 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 ZC3H6P61129 1189 aaKnown RBP4.7□□□□□ -1.66
PTPN22-211ENST00000538253 XPCQ01831 940 aaPredicted RBP4.7□□□□□ -1.66
PTPN22-211ENST00000538253 ANKRD24Q8TF21 1146 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 SLIT2O94813 1529 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 DDB1Q16531 1140 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 RTF1Q92541 710 aaKnown RBP4.7□□□□□ -1.66
PTPN22-211ENST00000538253 GGNBP2Q9H3C7 697 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 FBXO3Q9UK99 471 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 ATRNO75882 1429 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 MON2Q7Z3U7 1717 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 USP54Q70EL1 1684 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 SPATA31A5Q5VU36 1347 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 SPATA31A7Q8IWB4 1347 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 PCDH11XQ9BZA7 1347 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 PCDH11YQ9BZA8 1340 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 NWD2Q9ULI1 1742 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 RSPH6AQ9H0K4 717 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 STRN4Q9NRL3 753 aa4.7□□□□□ -1.66
PTPN22-211ENST00000538253 CCER2I3L3R5 266 aa4.69□□□□□ -1.66
PTPN22-211ENST00000538253 FCHSD2O94868 740 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms