RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 LTN1O94822 1766 aa19.02■□□□□ 0.64
PRKAB1-203ENST00000537400 MEX3CQ5U5Q3 659 aaKnown RBP19.02■□□□□ 0.64
PRKAB1-203ENST00000537400 EMILIN1Q9Y6C2 1016 aa19.02■□□□□ 0.64
PRKAB1-203ENST00000537400 INSRP06213 1382 aa19.02■□□□□ 0.64
PRKAB1-203ENST00000537400 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.63
PRKAB1-203ENST00000537400 HOXC9P31274 260 aa19.01■□□□□ 0.63
PRKAB1-203ENST00000537400 MTHFSP49914 203 aa19.01■□□□□ 0.63
PRKAB1-203ENST00000537400 LMO7Q8WWI1 1683 aa19.01■□□□□ 0.63
PRKAB1-203ENST00000537400 CHRNA2Q15822 529 aa19■□□□□ 0.63
PRKAB1-203ENST00000537400 COL18A1P39060 1754 aa19■□□□□ 0.63
PRKAB1-203ENST00000537400 SLIT2O94813 1529 aa19■□□□□ 0.63
PRKAB1-203ENST00000537400 FNBP4Q8N3X1 1017 aaPredicted RBP18.99■□□□□ 0.63
PRKAB1-203ENST00000537400 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
PRKAB1-203ENST00000537400 ZBTB7CA1YPR0 619 aa18.98■□□□□ 0.63
PRKAB1-203ENST00000537400 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
PRKAB1-203ENST00000537400 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
PRKAB1-203ENST00000537400 C8orf37Q96NL8 207 aa18.98■□□□□ 0.63
PRKAB1-203ENST00000537400 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
PRKAB1-203ENST00000537400 NWD2Q9ULI1 1742 aa18.97■□□□□ 0.63
PRKAB1-203ENST00000537400 AXIN2Q9Y2T1 843 aa18.97■□□□□ 0.63
PRKAB1-203ENST00000537400 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
PRKAB1-203ENST00000537400 BTG4Q9NY30 223 aa18.96■□□□□ 0.63
PRKAB1-203ENST00000537400 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
PRKAB1-203ENST00000537400 COL5A2P05997 1499 aaPredicted RBP18.95■□□□□ 0.62
PRKAB1-203ENST00000537400 ERBB3P21860 1342 aa18.95■□□□□ 0.62
PRKAB1-203ENST00000537400 PLCH1Q4KWH8 1693 aa18.95■□□□□ 0.62
PRKAB1-203ENST00000537400 UNC5CLQ8IV45 518 aa18.93■□□□□ 0.62
PRKAB1-203ENST00000537400 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
PRKAB1-203ENST00000537400 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
PRKAB1-203ENST00000537400 BCL9LQ86UU0 1499 aa18.92■□□□□ 0.62
PRKAB1-203ENST00000537400 EVA1CP58658 441 aa18.92■□□□□ 0.62
PRKAB1-203ENST00000537400 AFF2P51816 1311 aa18.92■□□□□ 0.62
PRKAB1-203ENST00000537400 WDR17Q8IZU2 1322 aa18.92■□□□□ 0.62
PRKAB1-203ENST00000537400 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.91■□□□□ 0.62
PRKAB1-203ENST00000537400 DIAPH1O60610 1272 aaKnown RBP18.91■□□□□ 0.62
PRKAB1-203ENST00000537400 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
PRKAB1-203ENST00000537400 USP21Q9UK80 565 aa18.91■□□□□ 0.62
PRKAB1-203ENST00000537400 FAM208AQ9UK61 1670 aaKnown RBP18.9■□□□□ 0.62
PRKAB1-203ENST00000537400 CCER2I3L3R5 266 aa18.9■□□□□ 0.62
PRKAB1-203ENST00000537400 ZNF772Q68DY9 489 aaPredicted RBP18.9■□□□□ 0.62
PRKAB1-203ENST00000537400 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
PRKAB1-203ENST00000537400 NRAPQ86VF7 1730 aa18.9■□□□□ 0.62
PRKAB1-203ENST00000537400 CSB-PGBD3P0DP91 1061 aa18.89■□□□□ 0.61
PRKAB1-203ENST00000537400 IL13P35225 146 aa18.89■□□□□ 0.61
PRKAB1-203ENST00000537400 VPS72Q15906 364 aa18.89■□□□□ 0.61
PRKAB1-203ENST00000537400 CRB1P82279 1406 aa18.89■□□□□ 0.61
PRKAB1-203ENST00000537400 RGPD5Q99666 1765 aa18.88■□□□□ 0.61
PRKAB1-203ENST00000537400 STRN4Q9NRL3 753 aa18.88■□□□□ 0.61
PRKAB1-203ENST00000537400 LTV1Q96GA3 475 aaPredicted RBP18.87■□□□□ 0.61
PRKAB1-203ENST00000537400 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
PRKAB1-203ENST00000537400 TRPC5Q9UL62 973 aaPredicted RBP18.87■□□□□ 0.61
PRKAB1-203ENST00000537400 IGSF1Q8N6C5 1336 aa18.86■□□□□ 0.61
PRKAB1-203ENST00000537400 LARP1Q6PKG0 1096 aaKnown RBP18.86■□□□□ 0.61
PRKAB1-203ENST00000537400 TOM1L2Q6ZVM7 507 aa18.86■□□□□ 0.61
PRKAB1-203ENST00000537400 ATRNO75882 1429 aa18.85■□□□□ 0.61
PRKAB1-203ENST00000537400 NCAPD2Q15021 1401 aa18.85■□□□□ 0.61
PRKAB1-203ENST00000537400 SPATA31A5Q5VU36 1347 aa18.85■□□□□ 0.61
PRKAB1-203ENST00000537400 SPATA31A7Q8IWB4 1347 aa18.85■□□□□ 0.61
PRKAB1-203ENST00000537400 MIER1Q8N108 512 aa18.85■□□□□ 0.61
PRKAB1-203ENST00000537400 NLRP2Q9NX02 1062 aa18.85■□□□□ 0.61
PRKAB1-203ENST00000537400 THRAP3Q9Y2W1 955 aaKnown RBP18.85■□□□□ 0.61
PRKAB1-203ENST00000537400 EYA1Q99502 592 aa18.84■□□□□ 0.61
PRKAB1-203ENST00000537400 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
PRKAB1-203ENST00000537400 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.61
PRKAB1-203ENST00000537400 NBPF6Q5VWK0 638 aa18.83■□□□□ 0.6
PRKAB1-203ENST00000537400 NBPF4Q96M43 638 aa18.83■□□□□ 0.6
PRKAB1-203ENST00000537400 RGPD1P0DJD0 1748 aa18.83■□□□□ 0.6
PRKAB1-203ENST00000537400 PLEKHG2Q9H7P9 1386 aa18.82■□□□□ 0.6
PRKAB1-203ENST00000537400 QTRT2Q9H974 415 aaKnown RBP18.82■□□□□ 0.6
PRKAB1-203ENST00000537400 KDRP35968 1356 aa18.81■□□□□ 0.6
PRKAB1-203ENST00000537400 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
PRKAB1-203ENST00000537400 TCP11L2Q8N4U5 519 aa18.81■□□□□ 0.6
PRKAB1-203ENST00000537400 GJD4Q96KN9 370 aaPredicted RBP18.81■□□□□ 0.6
PRKAB1-203ENST00000537400 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
PRKAB1-203ENST00000537400 CCDC184Q52MB2 194 aa18.8■□□□□ 0.6
PRKAB1-203ENST00000537400 BARGINQ6ZT62 677 aa18.8■□□□□ 0.6
PRKAB1-203ENST00000537400 CDCA7Q9BWT1 371 aaPredicted RBP18.8■□□□□ 0.6
PRKAB1-203ENST00000537400 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
PRKAB1-203ENST00000537400 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
PRKAB1-203ENST00000537400 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
PRKAB1-203ENST00000537400 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
PRKAB1-203ENST00000537400 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
PRKAB1-203ENST00000537400 FCHSD2O94868 740 aa18.78■□□□□ 0.6
PRKAB1-203ENST00000537400 RBM6P78332 1123 aaKnown RBP18.77■□□□□ 0.6
PRKAB1-203ENST00000537400 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
PRKAB1-203ENST00000537400 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
PRKAB1-203ENST00000537400 ONECUT3O60422 494 aaPredicted RBP18.76■□□□□ 0.59
PRKAB1-203ENST00000537400 IL2RBP14784 551 aa18.76■□□□□ 0.59
PRKAB1-203ENST00000537400 RAPGEF4Q8WZA2 1011 aa18.76■□□□□ 0.59
PRKAB1-203ENST00000537400 USP35Q9P2H5 1018 aa18.76■□□□□ 0.59
PRKAB1-203ENST00000537400 DISP2A7MBM2 1401 aa18.75■□□□□ 0.59
PRKAB1-203ENST00000537400 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
PRKAB1-203ENST00000537400 UPF1Q92900 1129 aaKnown RBP eCLIP18.75■□□□□ 0.59
PRKAB1-203ENST00000537400 GLI3P10071 1580 aa18.75■□□□□ 0.59
PRKAB1-203ENST00000537400 TATP17735 454 aaPredicted RBP18.74■□□□□ 0.59
PRKAB1-203ENST00000537400 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
PRKAB1-203ENST00000537400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
PRKAB1-203ENST00000537400 HMOX1P09601 288 aa18.73■□□□□ 0.59
PRKAB1-203ENST00000537400 RXRBP28702 533 aa18.73■□□□□ 0.59
PRKAB1-203ENST00000537400 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms