RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 CERKQ8TCT0 537 aa30.37■■■□□ 2.45
RBFOX1-206ENST00000535565 RUNDC1Q96C34 613 aa30.37■■■□□ 2.45
RBFOX1-206ENST00000535565 ABCA3Q99758 1704 aa30.37■■■□□ 2.45
RBFOX1-206ENST00000535565 ARHGEF25Q86VW2 580 aa30.37■■■□□ 2.45
RBFOX1-206ENST00000535565 RGPD1P0DJD0 1748 aa30.36■■■□□ 2.45
RBFOX1-206ENST00000535565 IP6K1Q92551 441 aa30.36■■■□□ 2.45
RBFOX1-206ENST00000535565 LRRC59Q96AG4 307 aaKnown RBP30.36■■■□□ 2.45
RBFOX1-206ENST00000535565 ZBTB7CA1YPR0 619 aa30.35■■■□□ 2.45
RBFOX1-206ENST00000535565 PIP4K2BP78356 416 aa30.35■■■□□ 2.45
RBFOX1-206ENST00000535565 CABLES1Q8TDN4 633 aa30.33■■■□□ 2.45
RBFOX1-206ENST00000535565 FCHSD2O94868 740 aa30.32■■■□□ 2.45
RBFOX1-206ENST00000535565 COL16A1Q07092 1604 aaPredicted RBP30.31■■■□□ 2.44
RBFOX1-206ENST00000535565 SENP3-EIF4A1A0A087X0R7 540 aa30.31■■■□□ 2.44
RBFOX1-206ENST00000535565 ABCC6O95255 1503 aa30.31■■■□□ 2.44
RBFOX1-206ENST00000535565 ZC3H6P61129 1189 aaKnown RBP30.3■■■□□ 2.44
RBFOX1-206ENST00000535565 MAPK8IP3Q9UPT6 1336 aa30.29■■■□□ 2.44
RBFOX1-206ENST00000535565 APAF1O14727 1248 aa30.29■■■□□ 2.44
RBFOX1-206ENST00000535565 HAP1P54257 671 aaPredicted RBP30.29■■■□□ 2.44
RBFOX1-206ENST00000535565 NGEFQ8N5V2 710 aa30.29■■■□□ 2.44
RBFOX1-206ENST00000535565 COL22A1Q8NFW1 1626 aaPredicted RBP30.29■■■□□ 2.44
RBFOX1-206ENST00000535565 NEFMP07197 916 aa30.28■■■□□ 2.44
RBFOX1-206ENST00000535565 RGPD5Q99666 1765 aa30.28■■■□□ 2.44
RBFOX1-206ENST00000535565 CPDO75976 1380 aa30.28■■■□□ 2.44
RBFOX1-206ENST00000535565 RSPH6AQ9H0K4 717 aa30.28■■■□□ 2.44
RBFOX1-206ENST00000535565 SALL2Q9Y467 1007 aaPredicted RBP30.28■■■□□ 2.44
RBFOX1-206ENST00000535565 HMOX1P09601 288 aa30.27■■■□□ 2.44
RBFOX1-206ENST00000535565 PLEKHF1Q96S99 279 aa30.27■■■□□ 2.44
RBFOX1-206ENST00000535565 COL18A1P39060 1754 aa30.25■■■□□ 2.43
RBFOX1-206ENST00000535565 PRKAR2BP31323 418 aa30.24■■■□□ 2.43
RBFOX1-206ENST00000535565 TCP11L2Q8N4U5 519 aa30.24■■■□□ 2.43
RBFOX1-206ENST00000535565 LTV1Q96GA3 475 aaPredicted RBP30.24■■■□□ 2.43
RBFOX1-206ENST00000535565 KIAA0232Q92628 1395 aa30.24■■■□□ 2.43
RBFOX1-206ENST00000535565 SULT6B1Q6IMI4 303 aa30.23■■■□□ 2.43
RBFOX1-206ENST00000535565 IGSF1Q8N6C5 1336 aa30.22■■■□□ 2.43
RBFOX1-206ENST00000535565 EYA1Q99502 592 aa30.21■■■□□ 2.43
RBFOX1-206ENST00000535565 FAM208AQ9UK61 1670 aaKnown RBP30.19■■■□□ 2.42
RBFOX1-206ENST00000535565 RGPD2P0DJD1 1756 aa30.19■■■□□ 2.42
RBFOX1-206ENST00000535565 PDE3BQ13370 1112 aa30.19■■■□□ 2.42
RBFOX1-206ENST00000535565 NCBP3Q53F19 620 aaKnown RBP30.19■■■□□ 2.42
RBFOX1-206ENST00000535565 KDRP35968 1356 aa30.18■■■□□ 2.42
RBFOX1-206ENST00000535565 ANKRD24Q8TF21 1146 aa30.18■■■□□ 2.42
RBFOX1-206ENST00000535565 PRDM11Q9NQV5 511 aa30.18■■■□□ 2.42
RBFOX1-206ENST00000535565 AEBP1Q8IUX7 1158 aa30.17■■■□□ 2.42
RBFOX1-206ENST00000535565 AXIN2Q9Y2T1 843 aa30.17■■■□□ 2.42
RBFOX1-206ENST00000535565 NEUROD2Q15784 382 aa30.15■■■□□ 2.42
RBFOX1-206ENST00000535565 CHRNA2Q15822 529 aa30.15■■■□□ 2.42
RBFOX1-206ENST00000535565 LMO7Q8WWI1 1683 aa30.15■■■□□ 2.42
RBFOX1-206ENST00000535565 CAMTA1Q9Y6Y1 1673 aa30.15■■■□□ 2.42
RBFOX1-206ENST00000535565 RRP7AQ9Y3A4 280 aaKnown RBP30.15■■■□□ 2.42
RBFOX1-206ENST00000535565 ERBB3P21860 1342 aa30.15■■■□□ 2.42
RBFOX1-206ENST00000535565 TMPOP42166 694 aaKnown RBP30.14■■■□□ 2.42
RBFOX1-206ENST00000535565 ZNF521Q96K83 1311 aa30.13■■■□□ 2.41
RBFOX1-206ENST00000535565 CCDC27Q2M243 656 aa30.13■■■□□ 2.41
RBFOX1-206ENST00000535565 PHACTR3Q96KR7 559 aa30.11■■■□□ 2.41
RBFOX1-206ENST00000535565 DLG5Q8TDM6 1919 aa30.11■■■□□ 2.41
RBFOX1-206ENST00000535565 NFE2L2Q16236 605 aa30.1■■■□□ 2.41
RBFOX1-206ENST00000535565 NBPF6Q5VWK0 638 aa30.1■■■□□ 2.41
RBFOX1-206ENST00000535565 NBPF4Q96M43 638 aa30.1■■■□□ 2.41
RBFOX1-206ENST00000535565 COL14A1Q05707 1796 aaKnown RBP30.1■■■□□ 2.41
RBFOX1-206ENST00000535565 WWC1Q8IX03 1113 aa30.09■■■□□ 2.41
RBFOX1-206ENST00000535565 RIPK4P57078 832 aa30.08■■■□□ 2.41
RBFOX1-206ENST00000535565 GOLGA2Q08379 1002 aa30.08■■■□□ 2.41
RBFOX1-206ENST00000535565 PHF23Q9BUL5 403 aaPredicted RBP30.08■■■□□ 2.41
RBFOX1-206ENST00000535565 NCAPD2Q15021 1401 aa30.08■■■□□ 2.41
RBFOX1-206ENST00000535565 CSB-PGBD3P0DP91 1061 aa30.07■■■□□ 2.4
RBFOX1-206ENST00000535565 USHBP1Q8N6Y0 703 aa30.07■■■□□ 2.4
RBFOX1-206ENST00000535565 JCADQ9P266 1359 aa30.04■■■□□ 2.4
RBFOX1-206ENST00000535565 COL5A2P05997 1499 aaPredicted RBP30.04■■■□□ 2.4
RBFOX1-206ENST00000535565 WDR63Q8IWG1 891 aa30.03■■■□□ 2.4
RBFOX1-206ENST00000535565 FAM83GA6ND36 823 aa30.03■■■□□ 2.4
RBFOX1-206ENST00000535565 LMOD3Q0VAK6 560 aa30.03■■■□□ 2.4
RBFOX1-206ENST00000535565 CDCA7LQ96GN5 454 aa30.03■■■□□ 2.4
RBFOX1-206ENST00000535565 NLRP2Q9NX02 1062 aa30.03■■■□□ 2.4
RBFOX1-206ENST00000535565 TRIM35Q9UPQ4 493 aa30.01■■■□□ 2.39
RBFOX1-206ENST00000535565 GAS2L2Q8NHY3 880 aa30■■■□□ 2.39
RBFOX1-206ENST00000535565 WDR17Q8IZU2 1322 aa30■■■□□ 2.39
RBFOX1-206ENST00000535565 E9PSI1 815 aa29.99■■■□□ 2.39
RBFOX1-206ENST00000535565 PLCH1Q4KWH8 1693 aa29.98■■■□□ 2.39
RBFOX1-206ENST00000535565 EVA1CP58658 441 aa29.97■■■□□ 2.39
RBFOX1-206ENST00000535565 SLFN5Q08AF3 891 aa29.97■■■□□ 2.39
RBFOX1-206ENST00000535565 MTHFSDQ2M296 383 aaKnown RBP29.96■■■□□ 2.39
RBFOX1-206ENST00000535565 NUTM2BA6NNL0 878 aaPredicted RBP29.95■■■□□ 2.39
RBFOX1-206ENST00000535565 NUTM2EB1AL46 878 aaPredicted RBP29.95■■■□□ 2.39
RBFOX1-206ENST00000535565 NUTM2AQ8IVF1 878 aaPredicted RBP29.95■■■□□ 2.39
RBFOX1-206ENST00000535565 CALD1Q05682 793 aaKnown RBP29.94■■■□□ 2.38
RBFOX1-206ENST00000535565 TOM1L2Q6ZVM7 507 aa29.94■■■□□ 2.38
RBFOX1-206ENST00000535565 BTG4Q9NY30 223 aa29.94■■■□□ 2.38
RBFOX1-206ENST00000535565 ADAMTS2O95450 1211 aa29.94■■■□□ 2.38
RBFOX1-206ENST00000535565 IL16Q14005 1332 aa29.94■■■□□ 2.38
RBFOX1-206ENST00000535565 RAPGEF4Q8WZA2 1011 aa29.93■■■□□ 2.38
RBFOX1-206ENST00000535565 STRN4Q9NRL3 753 aa29.93■■■□□ 2.38
RBFOX1-206ENST00000535565 PLEKHG2Q9H7P9 1386 aa29.92■■■□□ 2.38
RBFOX1-206ENST00000535565 AMOTQ4VCS5 1084 aa29.92■■■□□ 2.38
RBFOX1-206ENST00000535565 SPATA31A6Q5VVP1 1343 aa29.91■■■□□ 2.38
RBFOX1-206ENST00000535565 HSPA1LP34931 641 aa29.91■■■□□ 2.38
RBFOX1-206ENST00000535565 PLEKHO1Q53GL0 409 aaPredicted RBP29.91■■■□□ 2.38
RBFOX1-206ENST00000535565 DUSP27Q5VZP5 1158 aa29.91■■■□□ 2.38
RBFOX1-206ENST00000535565 TRMT2AQ8IZ69 625 aaKnown RBP29.91■■■□□ 2.38
RBFOX1-206ENST00000535565 NWD2Q9ULI1 1742 aa29.91■■■□□ 2.38
RBFOX1-206ENST00000535565 PARP4Q9UKK3 1724 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms