RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-206ENST00000535038 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
TNFRSF1A-206ENST00000535038 MAN1A2O60476 641 aa9.59□□□□□ -0.87
TNFRSF1A-206ENST00000535038 BMP2P12643 396 aa9.59□□□□□ -0.87
TNFRSF1A-206ENST00000535038 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
TNFRSF1A-206ENST00000535038 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
TNFRSF1A-206ENST00000535038 KDM4CQ9H3R0 1056 aa9.59□□□□□ -0.87
TNFRSF1A-206ENST00000535038 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-206ENST00000535038 TOP2AP11388 1531 aaKnown RBP9.58□□□□□ -0.88
TNFRSF1A-206ENST00000535038 ERFEQ4G0M1 354 aa9.58□□□□□ -0.88
TNFRSF1A-206ENST00000535038 CCDC116Q8IYX3 515 aa9.58□□□□□ -0.88
TNFRSF1A-206ENST00000535038 LRRN4Q8WUT4 740 aa9.58□□□□□ -0.88
TNFRSF1A-206ENST00000535038 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
TNFRSF1A-206ENST00000535038 EMILIN1Q9Y6C2 1016 aa9.58□□□□□ -0.88
TNFRSF1A-206ENST00000535038 ERBB4Q15303 1308 aa9.57□□□□□ -0.88
TNFRSF1A-206ENST00000535038 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
TNFRSF1A-206ENST00000535038 PDXDC2PQ6P474 469 aa9.57□□□□□ -0.88
TNFRSF1A-206ENST00000535038 FKBPLQ9UIM3 349 aa9.57□□□□□ -0.88
TNFRSF1A-206ENST00000535038 BICRAQ9NZM4 1560 aa9.56□□□□□ -0.88
TNFRSF1A-206ENST00000535038 PROCA1Q8NCQ7 364 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF1A-206ENST00000535038 ARHGAP9Q9BRR9 750 aa9.56□□□□□ -0.88
TNFRSF1A-206ENST00000535038 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
TNFRSF1A-206ENST00000535038 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
TNFRSF1A-206ENST00000535038 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
TNFRSF1A-206ENST00000535038 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1A-206ENST00000535038 PPP2R2DQ66LE6 453 aa9.55□□□□□ -0.88
TNFRSF1A-206ENST00000535038 NR6A1Q15406 480 aa9.54□□□□□ -0.88
TNFRSF1A-206ENST00000535038 ZSCAN1Q8NBB4 408 aa9.54□□□□□ -0.88
TNFRSF1A-206ENST00000535038 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
TNFRSF1A-206ENST00000535038 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-206ENST00000535038 ZC3H4Q9UPT8 1303 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-206ENST00000535038 ZBTB33Q86T24 672 aa9.53□□□□□ -0.88
TNFRSF1A-206ENST00000535038 BCANQ96GW7 911 aa9.53□□□□□ -0.88
TNFRSF1A-206ENST00000535038 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
TNFRSF1A-206ENST00000535038 CDV3Q9UKY7 258 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-206ENST00000535038 PEG3Q9GZU2 1588 aa9.53□□□□□ -0.88
TNFRSF1A-206ENST00000535038 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF1A-206ENST00000535038 AP1G2O75843 785 aa9.52□□□□□ -0.89
TNFRSF1A-206ENST00000535038 VSIG8P0DPA2 414 aa9.52□□□□□ -0.89
TNFRSF1A-206ENST00000535038 SMARCA2P51531 1590 aa9.52□□□□□ -0.89
TNFRSF1A-206ENST00000535038 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF1A-206ENST00000535038 KCTD15Q96SI1 283 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-206ENST00000535038 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
TNFRSF1A-206ENST00000535038 LORP23490 312 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-206ENST00000535038 PTK2Q05397 1052 aa9.49□□□□□ -0.89
TNFRSF1A-206ENST00000535038 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-206ENST00000535038 TTLL8A6PVC2 850 aa9.48□□□□□ -0.89
TNFRSF1A-206ENST00000535038 PPFIA3O75145 1194 aa9.48□□□□□ -0.89
TNFRSF1A-206ENST00000535038 CBLBQ13191 982 aa9.48□□□□□ -0.89
TNFRSF1A-206ENST00000535038 Q6ZVU0 165 aa9.48□□□□□ -0.89
TNFRSF1A-206ENST00000535038 PNMA1Q8ND90 353 aa9.48□□□□□ -0.89
TNFRSF1A-206ENST00000535038 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
TNFRSF1A-206ENST00000535038 CCDC88BA6NC98 1476 aa9.47□□□□□ -0.89
TNFRSF1A-206ENST00000535038 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.47□□□□□ -0.89
TNFRSF1A-206ENST00000535038 USP17L8P0C7I0 530 aa9.46□□□□□ -0.9
TNFRSF1A-206ENST00000535038 INTS6LQ5JSJ4 861 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-206ENST00000535038 ADAM32Q8TC27 787 aa9.46□□□□□ -0.9
TNFRSF1A-206ENST00000535038 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.9
TNFRSF1A-206ENST00000535038 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
TNFRSF1A-206ENST00000535038 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.9
TNFRSF1A-206ENST00000535038 HMX1Q9NP08 348 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-206ENST00000535038 SPINT1O43278 529 aa9.44□□□□□ -0.9
TNFRSF1A-206ENST00000535038 NBPF20Q3BBV1 942 aa9.44□□□□□ -0.9
TNFRSF1A-206ENST00000535038 FIGNL2A6NMB9 653 aa9.43□□□□□ -0.9
TNFRSF1A-206ENST00000535038 RFC5P40937 340 aa9.43□□□□□ -0.9
TNFRSF1A-206ENST00000535038 PTSQ03393 145 aa9.42□□□□□ -0.9
TNFRSF1A-206ENST00000535038 TRIM26Q12899 539 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-206ENST00000535038 AGBL1Q96MI9 1066 aa9.41□□□□□ -0.9
TNFRSF1A-206ENST00000535038 RAB15P59190 212 aa9.4□□□□□ -0.9
TNFRSF1A-206ENST00000535038 RELBQ01201 579 aa9.4□□□□□ -0.9
TNFRSF1A-206ENST00000535038 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
TNFRSF1A-206ENST00000535038 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
TNFRSF1A-206ENST00000535038 PCMTD1Q96MG8 357 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF1A-206ENST00000535038 TMPRSS4Q9NRS4 437 aa9.39□□□□□ -0.91
TNFRSF1A-206ENST00000535038 CTSOP43234 321 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-206ENST00000535038 ZNF784Q8NCA9 323 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-206ENST00000535038 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-206ENST00000535038 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
TNFRSF1A-206ENST00000535038 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
TNFRSF1A-206ENST00000535038 POLMQ9NP87 494 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-206ENST00000535038 ERVH48-1M5A8F1 160 aa9.36□□□□□ -0.91
TNFRSF1A-206ENST00000535038 TMEM259Q4ZIN3 620 aa9.36□□□□□ -0.91
TNFRSF1A-206ENST00000535038 TRIM34Q9BYJ4 488 aa9.36□□□□□ -0.91
TNFRSF1A-206ENST00000535038 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-206ENST00000535038 ADH1AP07327 375 aa9.35□□□□□ -0.91
TNFRSF1A-206ENST00000535038 GPR161Q8N6U8 529 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-206ENST00000535038 SLC35F4A4IF30 521 aa9.34□□□□□ -0.91
TNFRSF1A-206ENST00000535038 ESPNB1AK53 854 aa9.34□□□□□ -0.91
TNFRSF1A-206ENST00000535038 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
TNFRSF1A-206ENST00000535038 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
TNFRSF1A-206ENST00000535038 NANOS1Q8WY41 292 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-206ENST00000535038 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
TNFRSF1A-206ENST00000535038 LILRA1O75019 489 aa9.33□□□□□ -0.92
TNFRSF1A-206ENST00000535038 KRT76Q01546 638 aa9.33□□□□□ -0.92
TNFRSF1A-206ENST00000535038 SEPT12Q8IYM1 358 aa9.33□□□□□ -0.92
TNFRSF1A-206ENST00000535038 CNTNAP3BQ96NU0 1288 aa9.33□□□□□ -0.92
TNFRSF1A-206ENST00000535038 CNTNAP3Q9BZ76 1288 aa9.33□□□□□ -0.92
TNFRSF1A-206ENST00000535038 EEA1Q15075 1411 aa9.32□□□□□ -0.92
TNFRSF1A-206ENST00000535038 ZBBXA8MT70 800 aa9.32□□□□□ -0.92
TNFRSF1A-206ENST00000535038 SLC24A1O60721 1099 aa9.32□□□□□ -0.92
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