RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 AMPHP49418 695 aa16.46■□□□□ 0.23
SCARB1-204ENST00000535005 HOXC9P31274 260 aa16.45■□□□□ 0.22
SCARB1-204ENST00000535005 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
SCARB1-204ENST00000535005 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
SCARB1-204ENST00000535005 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-204ENST00000535005 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-204ENST00000535005 LTN1O94822 1766 aa16.44■□□□□ 0.22
SCARB1-204ENST00000535005 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
SCARB1-204ENST00000535005 PRDM11Q9NQV5 511 aa16.43■□□□□ 0.22
SCARB1-204ENST00000535005 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-204ENST00000535005 COL18A1P39060 1754 aa16.43■□□□□ 0.22
SCARB1-204ENST00000535005 FAM83GA6ND36 823 aa16.41■□□□□ 0.22
SCARB1-204ENST00000535005 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
SCARB1-204ENST00000535005 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
SCARB1-204ENST00000535005 AXIN2Q9Y2T1 843 aa16.41■□□□□ 0.22
SCARB1-204ENST00000535005 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
SCARB1-204ENST00000535005 NUTM2BA6NNL0 878 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-204ENST00000535005 NUTM2EB1AL46 878 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-204ENST00000535005 IL13P35225 146 aa16.4■□□□□ 0.22
SCARB1-204ENST00000535005 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
SCARB1-204ENST00000535005 NUTM2AQ8IVF1 878 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-204ENST00000535005 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
SCARB1-204ENST00000535005 LMO7Q8WWI1 1683 aa16.4■□□□□ 0.22
SCARB1-204ENST00000535005 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
SCARB1-204ENST00000535005 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
SCARB1-204ENST00000535005 ADAMTS2O95450 1211 aa16.38■□□□□ 0.21
SCARB1-204ENST00000535005 LRP6O75581 1613 aa16.38■□□□□ 0.21
SCARB1-204ENST00000535005 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
SCARB1-204ENST00000535005 ERBB3P21860 1342 aa16.36■□□□□ 0.21
SCARB1-204ENST00000535005 ANKRD24Q8TF21 1146 aa16.36■□□□□ 0.21
SCARB1-204ENST00000535005 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCARB1-204ENST00000535005 SLIT2O94813 1529 aa16.34■□□□□ 0.21
SCARB1-204ENST00000535005 COL5A2P05997 1499 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-204ENST00000535005 NEFLP07196 543 aa16.34■□□□□ 0.21
SCARB1-204ENST00000535005 BTG4Q9NY30 223 aa16.34■□□□□ 0.21
SCARB1-204ENST00000535005 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
SCARB1-204ENST00000535005 FNBP4Q8N3X1 1017 aaPredicted RBP16.33■□□□□ 0.21
SCARB1-204ENST00000535005 LTV1Q96GA3 475 aaPredicted RBP16.33■□□□□ 0.21
SCARB1-204ENST00000535005 EYA1Q99502 592 aa16.33■□□□□ 0.21
SCARB1-204ENST00000535005 RGPD5Q99666 1765 aa16.33■□□□□ 0.2
SCARB1-204ENST00000535005 WDR17Q8IZU2 1322 aa16.33■□□□□ 0.2
SCARB1-204ENST00000535005 RGPD1P0DJD0 1748 aa16.33■□□□□ 0.2
SCARB1-204ENST00000535005 U2SURPO15042 1029 aaKnown RBP16.33■□□□□ 0.2
SCARB1-204ENST00000535005 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
SCARB1-204ENST00000535005 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-204ENST00000535005 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARB1-204ENST00000535005 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
SCARB1-204ENST00000535005 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 FCHSD2O94868 740 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 EVA1CP58658 441 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 FAM9BQ8IZU0 186 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 C8orf37Q96NL8 207 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 KDRP35968 1356 aa16.31■□□□□ 0.2
SCARB1-204ENST00000535005 PLCH1Q4KWH8 1693 aa16.3■□□□□ 0.2
SCARB1-204ENST00000535005 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
SCARB1-204ENST00000535005 CSB-PGBD3P0DP91 1061 aa16.3■□□□□ 0.2
SCARB1-204ENST00000535005 MEX3CQ5U5Q3 659 aaKnown RBP16.3■□□□□ 0.2
SCARB1-204ENST00000535005 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
SCARB1-204ENST00000535005 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
SCARB1-204ENST00000535005 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
SCARB1-204ENST00000535005 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
SCARB1-204ENST00000535005 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
SCARB1-204ENST00000535005 BCL9LQ86UU0 1499 aa16.28■□□□□ 0.2
SCARB1-204ENST00000535005 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
SCARB1-204ENST00000535005 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
SCARB1-204ENST00000535005 STRN4Q9NRL3 753 aa16.28■□□□□ 0.2
SCARB1-204ENST00000535005 NLRP2Q9NX02 1062 aa16.28■□□□□ 0.2
SCARB1-204ENST00000535005 CRB1P82279 1406 aa16.28■□□□□ 0.2
SCARB1-204ENST00000535005 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.2
SCARB1-204ENST00000535005 HMOX1P09601 288 aa16.26■□□□□ 0.19
SCARB1-204ENST00000535005 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
SCARB1-204ENST00000535005 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
SCARB1-204ENST00000535005 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
SCARB1-204ENST00000535005 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
SCARB1-204ENST00000535005 FKBP8Q14318 412 aa16.25■□□□□ 0.19
SCARB1-204ENST00000535005 USP21Q9UK80 565 aa16.25■□□□□ 0.19
SCARB1-204ENST00000535005 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
SCARB1-204ENST00000535005 AFF2P51816 1311 aa16.25■□□□□ 0.19
SCARB1-204ENST00000535005 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.25■□□□□ 0.19
SCARB1-204ENST00000535005 VPS72Q15906 364 aa16.24■□□□□ 0.19
SCARB1-204ENST00000535005 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-204ENST00000535005 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
SCARB1-204ENST00000535005 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
SCARB1-204ENST00000535005 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
SCARB1-204ENST00000535005 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
SCARB1-204ENST00000535005 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
SCARB1-204ENST00000535005 SPATA31A1Q5TZJ5 1347 aa16.23■□□□□ 0.19
SCARB1-204ENST00000535005 THRAP3Q9Y2W1 955 aaKnown RBP16.22■□□□□ 0.19
SCARB1-204ENST00000535005 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.19
SCARB1-204ENST00000535005 TCP11L2Q8N4U5 519 aa16.21■□□□□ 0.19
SCARB1-204ENST00000535005 ATRNO75882 1429 aa16.2■□□□□ 0.18
SCARB1-204ENST00000535005 NEFMP07197 916 aa16.2■□□□□ 0.18
SCARB1-204ENST00000535005 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
SCARB1-204ENST00000535005 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
SCARB1-204ENST00000535005 PHACTR3Q96KR7 559 aa16.2■□□□□ 0.18
SCARB1-204ENST00000535005 RBM19Q9Y4C8 960 aaKnown RBP16.2■□□□□ 0.18
SCARB1-204ENST00000535005 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms