RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 ARHGAP45Q92619 1136 aa23.84■■□□□ 1.41
COPS7A-204ENST00000534947 ZBTB40Q9NUA8 1239 aa23.84■■□□□ 1.41
COPS7A-204ENST00000534947 EMILIN1Q9Y6C2 1016 aa23.84■■□□□ 1.41
COPS7A-204ENST00000534947 SMC5Q8IY18 1101 aa23.83■■□□□ 1.41
COPS7A-204ENST00000534947 DLG5Q8TDM6 1919 aa23.82■■□□□ 1.4
COPS7A-204ENST00000534947 PIK3R4Q99570 1358 aa23.82■■□□□ 1.4
COPS7A-204ENST00000534947 ZNF853P0CG23 659 aa23.82■■□□□ 1.4
COPS7A-204ENST00000534947 BECN1Q14457 450 aa23.81■■□□□ 1.4
COPS7A-204ENST00000534947 TMEM57Q8N5G2 664 aa23.81■■□□□ 1.4
COPS7A-204ENST00000534947 PHACTR3Q96KR7 559 aa23.81■■□□□ 1.4
COPS7A-204ENST00000534947 PTCH1Q13635 1447 aa23.81■■□□□ 1.4
COPS7A-204ENST00000534947 ROBO2Q9HCK4 1378 aa23.8■■□□□ 1.4
COPS7A-204ENST00000534947 SEC24BO95487 1268 aa23.79■■□□□ 1.4
COPS7A-204ENST00000534947 SLC4A3P48751 1232 aa23.79■■□□□ 1.4
COPS7A-204ENST00000534947 NFKBIBQ15653 356 aa23.79■■□□□ 1.4
COPS7A-204ENST00000534947 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
COPS7A-204ENST00000534947 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.79■■□□□ 1.4
COPS7A-204ENST00000534947 HMOX1P09601 288 aa23.78■■□□□ 1.4
COPS7A-204ENST00000534947 FBLN1P23142 703 aa23.78■■□□□ 1.4
COPS7A-204ENST00000534947 TBC1D32Q96NH3 1257 aa23.78■■□□□ 1.4
COPS7A-204ENST00000534947 PRR36Q9H6K5 1346 aa23.78■■□□□ 1.4
COPS7A-204ENST00000534947 VAMP4O75379 141 aa23.77■■□□□ 1.4
COPS7A-204ENST00000534947 PLEKHG3A1L390 1219 aa23.76■■□□□ 1.39
COPS7A-204ENST00000534947 CFAP44Q96MT7 982 aa23.76■■□□□ 1.39
COPS7A-204ENST00000534947 OVOS2A0A0J9YW53 1432 aa23.76■■□□□ 1.39
COPS7A-204ENST00000534947 OVOS2Q6IE36 1432 aa23.76■■□□□ 1.39
COPS7A-204ENST00000534947 MRPL50Q8N5N7 158 aaKnown RBP23.75■■□□□ 1.39
COPS7A-204ENST00000534947 ZRANB1Q9UGI0 708 aa23.74■■□□□ 1.39
COPS7A-204ENST00000534947 SLIT1O75093 1534 aa23.73■■□□□ 1.39
COPS7A-204ENST00000534947 TTC21BQ7Z4L5 1316 aa23.73■■□□□ 1.39
COPS7A-204ENST00000534947 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
COPS7A-204ENST00000534947 USP6P35125 1406 aa23.72■■□□□ 1.39
COPS7A-204ENST00000534947 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
COPS7A-204ENST00000534947 ARHGAP23Q9P227 1491 aa23.71■■□□□ 1.39
COPS7A-204ENST00000534947 NCKAP5LQ9HCH0 1330 aa23.71■■□□□ 1.39
COPS7A-204ENST00000534947 RGPD1P0DJD0 1748 aa23.71■■□□□ 1.39
COPS7A-204ENST00000534947 HAP1P54257 671 aaPredicted RBP23.71■■□□□ 1.39
COPS7A-204ENST00000534947 NUCB1Q02818 461 aa23.71■■□□□ 1.39
COPS7A-204ENST00000534947 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
COPS7A-204ENST00000534947 USP31Q70CQ4 1352 aa23.7■■□□□ 1.39
COPS7A-204ENST00000534947 ABCC4O15439 1325 aa23.7■■□□□ 1.38
COPS7A-204ENST00000534947 DIP2AQ14689 1571 aa23.7■■□□□ 1.38
COPS7A-204ENST00000534947 ZBTB7BO15156 539 aaPredicted RBP23.69■■□□□ 1.38
COPS7A-204ENST00000534947 ACEP12821 1306 aa23.68■■□□□ 1.38
COPS7A-204ENST00000534947 TWISTNBQ3B726 338 aaPredicted RBP23.68■■□□□ 1.38
COPS7A-204ENST00000534947 SSH2Q76I76 1423 aa23.68■■□□□ 1.38
COPS7A-204ENST00000534947 GCC1Q96CN9 775 aa23.67■■□□□ 1.38
COPS7A-204ENST00000534947 THUMPD2Q9BTF0 503 aaKnown RBP23.67■■□□□ 1.38
COPS7A-204ENST00000534947 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
COPS7A-204ENST00000534947 LTKP29376 864 aa23.67■■□□□ 1.38
COPS7A-204ENST00000534947 API5Q9BZZ5 524 aaKnown RBP23.67■■□□□ 1.38
COPS7A-204ENST00000534947 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
COPS7A-204ENST00000534947 EID1Q9Y6B2 187 aa23.66■■□□□ 1.38
COPS7A-204ENST00000534947 TTC21AQ8NDW8 1320 aa23.66■■□□□ 1.38
COPS7A-204ENST00000534947 EIF4A2Q14240 407 aaKnown RBP23.66■■□□□ 1.38
COPS7A-204ENST00000534947 PTPRUQ92729 1446 aa23.65■■□□□ 1.38
COPS7A-204ENST00000534947 PEAK1Q9H792 1746 aa23.64■■□□□ 1.38
COPS7A-204ENST00000534947 CHD1LQ86WJ1 897 aa23.63■■□□□ 1.37
COPS7A-204ENST00000534947 TBX22Q9Y458 520 aa23.63■■□□□ 1.37
COPS7A-204ENST00000534947 FMN2Q9NZ56 1722 aa23.63■■□□□ 1.37
COPS7A-204ENST00000534947 GSE1Q14687 1217 aa23.62■■□□□ 1.37
COPS7A-204ENST00000534947 KIAA0232Q92628 1395 aa23.62■■□□□ 1.37
COPS7A-204ENST00000534947 C8orf58Q8NAV2 365 aa23.61■■□□□ 1.37
COPS7A-204ENST00000534947 ARHGEF10O15013 1369 aa23.61■■□□□ 1.37
COPS7A-204ENST00000534947 C22orf23Q9BZE7 217 aa23.6■■□□□ 1.37
COPS7A-204ENST00000534947 SULT6B1Q6IMI4 303 aa23.59■■□□□ 1.37
COPS7A-204ENST00000534947 BMP2KLQ5H9B9 411 aa23.59■■□□□ 1.37
COPS7A-204ENST00000534947 TBC1D2Q9BYX2 928 aa23.59■■□□□ 1.37
COPS7A-204ENST00000534947 ANTXR1Q9H6X2 564 aa23.59■■□□□ 1.37
COPS7A-204ENST00000534947 CHL1O00533 1208 aa23.58■■□□□ 1.37
COPS7A-204ENST00000534947 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.36
COPS7A-204ENST00000534947 FER1L4A9Z1Z3 1794 aa23.57■■□□□ 1.36
COPS7A-204ENST00000534947 FAM83GA6ND36 823 aa23.57■■□□□ 1.36
COPS7A-204ENST00000534947 FRAT2O75474 233 aaPredicted RBP23.56■■□□□ 1.36
COPS7A-204ENST00000534947 AEBP1Q8IUX7 1158 aa23.55■■□□□ 1.36
COPS7A-204ENST00000534947 AMOTL2Q9Y2J4 779 aa23.55■■□□□ 1.36
COPS7A-204ENST00000534947 SBNO1A3KN83 1393 aa23.55■■□□□ 1.36
COPS7A-204ENST00000534947 INTS3Q68E01 1043 aaKnown RBP23.55■■□□□ 1.36
COPS7A-204ENST00000534947 ANKARQ7Z5J8 1434 aa23.55■■□□□ 1.36
COPS7A-204ENST00000534947 LNPKQ9C0E8 428 aa23.55■■□□□ 1.36
COPS7A-204ENST00000534947 USP54Q70EL1 1684 aa23.55■■□□□ 1.36
COPS7A-204ENST00000534947 FLT4P35916 1363 aa23.55■■□□□ 1.36
COPS7A-204ENST00000534947 ELL2O00472 640 aaPredicted RBP23.54■■□□□ 1.36
COPS7A-204ENST00000534947 KDRP35968 1356 aa23.54■■□□□ 1.36
COPS7A-204ENST00000534947 RBM25P49756 843 aaKnown RBP23.54■■□□□ 1.36
COPS7A-204ENST00000534947 MFAP1P55081 439 aaKnown RBP23.54■■□□□ 1.36
COPS7A-204ENST00000534947 THEMISQ8N1K5 641 aaPredicted RBP23.53■■□□□ 1.36
COPS7A-204ENST00000534947 SLC26A8Q96RN1 970 aa23.53■■□□□ 1.36
COPS7A-204ENST00000534947 PTPRCP08575 1304 aa23.53■■□□□ 1.36
COPS7A-204ENST00000534947 EIF5BO60841 1220 aaKnown RBP23.52■■□□□ 1.36
COPS7A-204ENST00000534947 DCTN1Q14203 1278 aa23.52■■□□□ 1.36
COPS7A-204ENST00000534947 HSP90AB2PQ58FF8 381 aa23.52■■□□□ 1.36
COPS7A-204ENST00000534947 CRB1P82279 1406 aa23.51■■□□□ 1.35
COPS7A-204ENST00000534947 SIRT2Q8IXJ6 389 aa23.51■■□□□ 1.35
COPS7A-204ENST00000534947 ANKRD45Q5TZF3 282 aa23.5■■□□□ 1.35
COPS7A-204ENST00000534947 PIK3C2AO00443 1686 aa23.5■■□□□ 1.35
COPS7A-204ENST00000534947 RGS12O14924 1447 aa23.5■■□□□ 1.35
COPS7A-204ENST00000534947 RGPD8O14715 1765 aaPredicted RBP23.5■■□□□ 1.35
COPS7A-204ENST00000534947 MAP3K19Q56UN5 1328 aa23.49■■□□□ 1.35
COPS7A-204ENST00000534947 CEBPAP49715 358 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms