RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 EXOC6Q8TAG9 804 aa11.59□□□□□ -0.55
SF3B2-216ENST00000534765 HDGFL2Q7Z4V5 671 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-216ENST00000534765 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-216ENST00000534765 OVOS2A0A0J9YW53 1432 aa11.59□□□□□ -0.55
SF3B2-216ENST00000534765 OVOS2Q6IE36 1432 aa11.59□□□□□ -0.55
SF3B2-216ENST00000534765 NSD2O96028 1365 aa11.58□□□□□ -0.55
SF3B2-216ENST00000534765 BCAR3O75815 825 aa11.58□□□□□ -0.56
SF3B2-216ENST00000534765 HMOX1P09601 288 aa11.58□□□□□ -0.56
SF3B2-216ENST00000534765 RRAGDQ9NQL2 400 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-216ENST00000534765 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
SF3B2-216ENST00000534765 TTC21BQ7Z4L5 1316 aa11.58□□□□□ -0.56
SF3B2-216ENST00000534765 U2AF1L5P0DN76 240 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-216ENST00000534765 U2AF1Q01081 240 aaKnown RBP eCLIP11.58□□□□□ -0.56
SF3B2-216ENST00000534765 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-216ENST00000534765 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
SF3B2-216ENST00000534765 XIRP1Q702N8 1843 aaKnown RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
SF3B2-216ENST00000534765 DDX17Q92841 729 aaKnown RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 STRCQ7RTU9 1775 aa11.57□□□□□ -0.56
SF3B2-216ENST00000534765 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
SF3B2-216ENST00000534765 XPCQ01831 940 aaPredicted RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
SF3B2-216ENST00000534765 NPHP4O75161 1426 aaPredicted RBP11.56□□□□□ -0.56
SF3B2-216ENST00000534765 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
SF3B2-216ENST00000534765 ZHX1Q9UKY1 873 aaPredicted RBP11.56□□□□□ -0.56
SF3B2-216ENST00000534765 ORAI2Q96SN7 254 aa11.56□□□□□ -0.56
SF3B2-216ENST00000534765 IL13P35225 146 aa11.56□□□□□ -0.56
SF3B2-216ENST00000534765 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
SF3B2-216ENST00000534765 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
SF3B2-216ENST00000534765 TSR2Q969E8 191 aaKnown RBP11.55□□□□□ -0.56
SF3B2-216ENST00000534765 RGPD1P0DJD0 1748 aa11.55□□□□□ -0.56
SF3B2-216ENST00000534765 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-216ENST00000534765 RGPD2P0DJD1 1756 aa11.54□□□□□ -0.56
SF3B2-216ENST00000534765 CHMP4BQ9H444 224 aaKnown RBP11.54□□□□□ -0.56
SF3B2-216ENST00000534765 FAM13BQ9NYF5 915 aa11.54□□□□□ -0.56
SF3B2-216ENST00000534765 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
SF3B2-216ENST00000534765 PRDM10Q9NQV6 1147 aa11.54□□□□□ -0.56
SF3B2-216ENST00000534765 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
SF3B2-216ENST00000534765 FAM83GA6ND36 823 aa11.53□□□□□ -0.56
SF3B2-216ENST00000534765 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
SF3B2-216ENST00000534765 L1TD1Q5T7N2 865 aaKnown RBP11.53□□□□□ -0.56
SF3B2-216ENST00000534765 BCL2L13Q9BXK5 485 aa11.52□□□□□ -0.56
SF3B2-216ENST00000534765 NWD1Q149M9 1564 aa11.52□□□□□ -0.57
SF3B2-216ENST00000534765 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
SF3B2-216ENST00000534765 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
SF3B2-216ENST00000534765 CDK11BP21127 795 aaKnown RBP11.51□□□□□ -0.57
SF3B2-216ENST00000534765 TMPOP42166 694 aaKnown RBP11.51□□□□□ -0.57
SF3B2-216ENST00000534765 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
SF3B2-216ENST00000534765 EIF4A2Q14240 407 aaKnown RBP11.51□□□□□ -0.57
SF3B2-216ENST00000534765 DIAPH1O60610 1272 aaKnown RBP11.51□□□□□ -0.57
SF3B2-216ENST00000534765 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
SF3B2-216ENST00000534765 MAP3K19Q56UN5 1328 aa11.51□□□□□ -0.57
SF3B2-216ENST00000534765 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
SF3B2-216ENST00000534765 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
SF3B2-216ENST00000534765 LTN1O94822 1766 aa11.51□□□□□ -0.57
SF3B2-216ENST00000534765 CDK12Q9NYV4 1490 aaPredicted RBP11.5□□□□□ -0.57
SF3B2-216ENST00000534765 PDE3BQ13370 1112 aa11.5□□□□□ -0.57
SF3B2-216ENST00000534765 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
SF3B2-216ENST00000534765 USP31Q70CQ4 1352 aa11.49□□□□□ -0.57
SF3B2-216ENST00000534765 COG3Q96JB2 828 aa11.49□□□□□ -0.57
SF3B2-216ENST00000534765 FOXO3O43524 673 aa11.49□□□□□ -0.57
SF3B2-216ENST00000534765 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
SF3B2-216ENST00000534765 ADGRL3Q9HAR2 1447 aa11.49□□□□□ -0.57
SF3B2-216ENST00000534765 RGPD5Q99666 1765 aa11.48□□□□□ -0.57
SF3B2-216ENST00000534765 TRPM3Q9HCF6 1732 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-216ENST00000534765 RLBP1P12271 317 aa11.48□□□□□ -0.57
SF3B2-216ENST00000534765 NGDNQ8NEJ9 315 aaKnown RBP11.48□□□□□ -0.57
SF3B2-216ENST00000534765 PIK3R4Q99570 1358 aa11.48□□□□□ -0.57
SF3B2-216ENST00000534765 GOLGA6L3A6NEY3 463 aa11.47□□□□□ -0.57
SF3B2-216ENST00000534765 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
SF3B2-216ENST00000534765 USP54Q70EL1 1684 aa11.47□□□□□ -0.57
SF3B2-216ENST00000534765 ANP32BQ92688 251 aaKnown RBP11.46□□□□□ -0.57
SF3B2-216ENST00000534765 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.57
SF3B2-216ENST00000534765 NFAT5O94916 1531 aa11.46□□□□□ -0.57
SF3B2-216ENST00000534765 RIPK4P57078 832 aa11.46□□□□□ -0.57
SF3B2-216ENST00000534765 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
SF3B2-216ENST00000534765 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
SF3B2-216ENST00000534765 NAP1L2Q9ULW6 460 aaPredicted RBP11.46□□□□□ -0.57
SF3B2-216ENST00000534765 USHBP1Q8N6Y0 703 aa11.45□□□□□ -0.58
SF3B2-216ENST00000534765 TSPYL6Q8N831 410 aa11.45□□□□□ -0.58
SF3B2-216ENST00000534765 PANK1Q8TE04 598 aa11.45□□□□□ -0.58
SF3B2-216ENST00000534765 ANKARQ7Z5J8 1434 aa11.45□□□□□ -0.58
SF3B2-216ENST00000534765 NLRP6P59044 892 aa11.44□□□□□ -0.58
SF3B2-216ENST00000534765 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
SF3B2-216ENST00000534765 SULT6B1Q6IMI4 303 aa11.44□□□□□ -0.58
SF3B2-216ENST00000534765 E9PSI1 815 aa11.44□□□□□ -0.58
SF3B2-216ENST00000534765 TMEM94Q12767 1356 aa11.44□□□□□ -0.58
SF3B2-216ENST00000534765 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
SF3B2-216ENST00000534765 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
SF3B2-216ENST00000534765 MED1Q15648 1581 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-216ENST00000534765 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
SF3B2-216ENST00000534765 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
SF3B2-216ENST00000534765 ZNF335Q9H4Z2 1342 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-216ENST00000534765 VGLL3A8MV65 326 aa11.43□□□□□ -0.58
SF3B2-216ENST00000534765 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms