RNA–Protein interactions for RNA: ENST00000534692.1

CKLF-207, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-207ENST00000534692 GGNBP2Q9H3C7 697 aa31.63■■■□□ 2.65
CKLF-207ENST00000534692 ONECUT3O60422 494 aaPredicted RBP31.62■■■□□ 2.65
CKLF-207ENST00000534692 PANK3Q9H999 370 aa31.62■■■□□ 2.65
CKLF-207ENST00000534692 ANKRD26Q9UPS8 1709 aa31.62■■■□□ 2.65
CKLF-207ENST00000534692 BRWD3Q6RI45 1802 aa31.61■■■□□ 2.65
CKLF-207ENST00000534692 CGNL1Q0VF96 1302 aa31.61■■■□□ 2.65
CKLF-207ENST00000534692 EVA1CP58658 441 aa31.61■■■□□ 2.65
CKLF-207ENST00000534692 AXIN2Q9Y2T1 843 aa31.61■■■□□ 2.65
CKLF-207ENST00000534692 CCDC7Q96M83 1385 aa31.6■■■□□ 2.65
CKLF-207ENST00000534692 SPATA31A1Q5TZJ5 1347 aa31.6■■■□□ 2.65
CKLF-207ENST00000534692 THSD7AQ9UPZ6 1657 aa31.58■■■□□ 2.65
CKLF-207ENST00000534692 LARP1Q6PKG0 1096 aaKnown RBP31.58■■■□□ 2.65
CKLF-207ENST00000534692 WASHC2AQ641Q2 1341 aa31.57■■■□□ 2.64
CKLF-207ENST00000534692 CRB1P82279 1406 aa31.56■■■□□ 2.64
CKLF-207ENST00000534692 WDR17Q8IZU2 1322 aa31.53■■■□□ 2.64
CKLF-207ENST00000534692 FAM98CQ17RN3 349 aaKnown RBP31.53■■■□□ 2.64
CKLF-207ENST00000534692 SEPT12Q8IYM1 358 aa31.53■■■□□ 2.64
CKLF-207ENST00000534692 MAP3K19Q56UN5 1328 aa31.52■■■□□ 2.64
CKLF-207ENST00000534692 BLMP54132 1417 aaPredicted RBP31.52■■■□□ 2.64
CKLF-207ENST00000534692 WNK3Q9BYP7 1800 aa31.5■■■□□ 2.63
CKLF-207ENST00000534692 FBLN1P23142 703 aa31.5■■■□□ 2.63
CKLF-207ENST00000534692 BARGINQ6ZT62 677 aa31.5■■■□□ 2.63
CKLF-207ENST00000534692 IP6K1Q92551 441 aa31.5■■■□□ 2.63
CKLF-207ENST00000534692 NSD2O96028 1365 aa31.5■■■□□ 2.63
CKLF-207ENST00000534692 RTL1A6NKG5 1358 aa31.49■■■□□ 2.63
CKLF-207ENST00000534692 TCP11L2Q8N4U5 519 aa31.49■■■□□ 2.63
CKLF-207ENST00000534692 FAM208AQ9UK61 1670 aaKnown RBP31.48■■■□□ 2.63
CKLF-207ENST00000534692 MAP2P11137 1827 aaKnown RBP31.48■■■□□ 2.63
CKLF-207ENST00000534692 THRAP3Q9Y2W1 955 aaKnown RBP31.48■■■□□ 2.63
CKLF-207ENST00000534692 ERBB3P21860 1342 aa31.48■■■□□ 2.63
CKLF-207ENST00000534692 USP35Q9P2H5 1018 aa31.47■■■□□ 2.63
CKLF-207ENST00000534692 PEAK1Q9H792 1746 aa31.46■■■□□ 2.63
CKLF-207ENST00000534692 ZEB1P37275 1124 aaPredicted RBP31.46■■■□□ 2.63
CKLF-207ENST00000534692 TOM1L2Q6ZVM7 507 aa31.46■■■□□ 2.63
CKLF-207ENST00000534692 PARP4Q9UKK3 1724 aaKnown RBP31.46■■■□□ 2.63
CKLF-207ENST00000534692 RRS1Q15050 365 aaKnown RBP31.45■■■□□ 2.63
CKLF-207ENST00000534692 KNSTRNQ9Y448 316 aa31.45■■■□□ 2.63
CKLF-207ENST00000534692 KIF24Q5T7B8 1368 aa31.44■■■□□ 2.62
CKLF-207ENST00000534692 HOXC9P31274 260 aa31.44■■■□□ 2.62
CKLF-207ENST00000534692 CSB-PGBD3P0DP91 1061 aa31.43■■■□□ 2.62
CKLF-207ENST00000534692 AMPHP49418 695 aa31.43■■■□□ 2.62
CKLF-207ENST00000534692 CARD10Q9BWT7 1032 aa31.43■■■□□ 2.62
CKLF-207ENST00000534692 A0A0G2JS52 829 aa31.42■■■□□ 2.62
CKLF-207ENST00000534692 PER1O15534 1290 aaPredicted RBP31.42■■■□□ 2.62
CKLF-207ENST00000534692 MYT1Q01538 1121 aa31.42■■■□□ 2.62
CKLF-207ENST00000534692 EP400Q96L91 3159 aa31.42■■■□□ 2.62
CKLF-207ENST00000534692 ANKRD24Q8TF21 1146 aa31.41■■■□□ 2.62
CKLF-207ENST00000534692 AMER1Q5JTC6 1135 aaPredicted RBP31.4■■■□□ 2.62
CKLF-207ENST00000534692 KRT27Q7Z3Y8 459 aa31.4■■■□□ 2.62
CKLF-207ENST00000534692 FLT4P35916 1363 aa31.39■■■□□ 2.62
CKLF-207ENST00000534692 UPF1Q92900 1129 aaKnown RBP eCLIP31.38■■■□□ 2.61
CKLF-207ENST00000534692 RGPD2P0DJD1 1756 aa31.38■■■□□ 2.61
CKLF-207ENST00000534692 LRRC37A3O60309 1634 aa31.37■■■□□ 2.61
CKLF-207ENST00000534692 DISP2A7MBM2 1401 aa31.36■■■□□ 2.61
CKLF-207ENST00000534692 INSRP06213 1382 aa31.35■■■□□ 2.61
CKLF-207ENST00000534692 EMILIN1Q9Y6C2 1016 aa31.35■■■□□ 2.61
CKLF-207ENST00000534692 NLRP2Q9NX02 1062 aa31.34■■■□□ 2.61
CKLF-207ENST00000534692 CDCA7Q9BWT1 371 aaPredicted RBP31.33■■■□□ 2.61
CKLF-207ENST00000534692 NPC1L1Q9UHC9 1359 aa31.32■■■□□ 2.6
CKLF-207ENST00000534692 POLKQ9UBT6 870 aa31.32■■■□□ 2.6
CKLF-207ENST00000534692 MORC1Q86VD1 984 aa31.31■■■□□ 2.6
CKLF-207ENST00000534692 LTV1Q96GA3 475 aaPredicted RBP31.31■■■□□ 2.6
CKLF-207ENST00000534692 SMG6Q86US8 1419 aaKnown RBP31.31■■■□□ 2.6
CKLF-207ENST00000534692 HSP90AB2PQ58FF8 381 aa31.3■■■□□ 2.6
CKLF-207ENST00000534692 TNNT2P45379 298 aaPredicted RBP31.29■■■□□ 2.6
CKLF-207ENST00000534692 PDE3BQ13370 1112 aa31.25■■■□□ 2.59
CKLF-207ENST00000534692 PPM1GO15355 546 aaPredicted RBP31.24■■■□□ 2.59
CKLF-207ENST00000534692 DDB1Q16531 1140 aa31.24■■■□□ 2.59
CKLF-207ENST00000534692 TNS2Q63HR2 1409 aa31.23■■■□□ 2.59
CKLF-207ENST00000534692 IL2RBP14784 551 aa31.22■■■□□ 2.59
CKLF-207ENST00000534692 CCDC125Q86Z20 511 aa31.22■■■□□ 2.59
CKLF-207ENST00000534692 CC2D1BQ5T0F9 858 aaKnown RBP31.21■■■□□ 2.59
CKLF-207ENST00000534692 FAM182BQ5T319 152 aa31.21■■■□□ 2.59
CKLF-207ENST00000534692 NBPF6Q5VWK0 638 aa31.21■■■□□ 2.59
CKLF-207ENST00000534692 NBPF4Q96M43 638 aa31.21■■■□□ 2.59
CKLF-207ENST00000534692 RGPD1P0DJD0 1748 aa31.21■■■□□ 2.59
CKLF-207ENST00000534692 NCAPD2Q15021 1401 aa31.19■■■□□ 2.58
CKLF-207ENST00000534692 FAM196AQ6ZSG2 479 aa31.19■■■□□ 2.58
CKLF-207ENST00000534692 SBF2Q86WG5 1849 aa31.17■■■□□ 2.58
CKLF-207ENST00000534692 OVOS2A0A0G2JMS6 1433 aa31.17■■■□□ 2.58
CKLF-207ENST00000534692 TNS1Q9HBL0 1735 aaKnown RBP31.16■■■□□ 2.58
CKLF-207ENST00000534692 EXOC5O00471 708 aa31.16■■■□□ 2.58
CKLF-207ENST00000534692 MEGF6O75095 1541 aa31.14■■■□□ 2.58
CKLF-207ENST00000534692 BCL9O00512 1426 aa31.14■■■□□ 2.58
CKLF-207ENST00000534692 SHANK3Q9BYB0 1731 aa31.13■■■□□ 2.57
CKLF-207ENST00000534692 MARCH10Q8NA82 808 aaPredicted RBP31.13■■■□□ 2.57
CKLF-207ENST00000534692 EIF4A2Q14240 407 aaKnown RBP31.12■■■□□ 2.57
CKLF-207ENST00000534692 USHBP1Q8N6Y0 703 aa31.12■■■□□ 2.57
CKLF-207ENST00000534692 EYA1Q99502 592 aa31.09■■■□□ 2.57
CKLF-207ENST00000534692 MTHFSP49914 203 aa31.07■■■□□ 2.56
CKLF-207ENST00000534692 SF3B2Q13435 895 aaKnown RBP31.06■■■□□ 2.56
CKLF-207ENST00000534692 RAPGEF4Q8WZA2 1011 aa31.06■■■□□ 2.56
CKLF-207ENST00000534692 PKD1L3Q7Z443 1732 aa31.06■■■□□ 2.56
CKLF-207ENST00000534692 CNGB1Q14028 1251 aaPredicted RBP31.05■■■□□ 2.56
CKLF-207ENST00000534692 IGSF1Q8N6C5 1336 aa31.04■■■□□ 2.56
CKLF-207ENST00000534692 TRIM37O94972 964 aa31.04■■■□□ 2.56
CKLF-207ENST00000534692 KAT6BQ8WYB5 2073 aa31.02■■■□□ 2.56
CKLF-207ENST00000534692 TATP17735 454 aaPredicted RBP31.02■■■□□ 2.56
CKLF-207ENST00000534692 ZCRB1Q8TBF4 217 aaKnown RBP31.02■■■□□ 2.56
CKLF-207ENST00000534692 NHSQ6T4R5 1651 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms