RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 USP17L3A6NCW0 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 USP17L4A6NCW7 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 PIK3CDO00329 1044 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 SLFNL1Q499Z3 407 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 USP17L2Q6R6M4 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 USP17L1Q7RTZ2 530 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 NOVA2Q9UNW9 492 aaKnown RBP6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 PRXQ9BXM0 1461 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 PRDM2Q13029 1718 aa6.84□□□□□ -1.31
CYCSP28-201ENST00000534284 KIF27Q86VH2 1401 aa6.84□□□□□ -1.32
CYCSP28-201ENST00000534284 ZC3H4Q9UPT8 1303 aaKnown RBP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L5A8MUK1 530 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 NR1I2O75469 434 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 KANK4Q5T7N3 995 aaPredicted RBP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 LARP1Q6PKG0 1096 aaKnown RBP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 SND1Q7KZF4 910 aaKnown RBP eCLIP6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 ZNF592Q92610 1267 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 ZNF428Q96B54 188 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 PCDHB3Q9Y5E6 796 aa6.83□□□□□ -1.32
CYCSP28-201ENST00000534284 CFTRP13569 1480 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 RAPGEF2Q9Y4G8 1499 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 JUNDP17535 347 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 PTK2Q05397 1052 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 ELOAQ14241 798 aaKnown RBP6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 PTPRNQ16849 979 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 TMEM164Q5U3C3 297 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 SCUBE3Q8IX30 993 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 PCDHB9Q9Y5E1 797 aa6.82□□□□□ -1.32
CYCSP28-201ENST00000534284 E9PSI1 815 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 RNF135Q8IUD6 432 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 ARMC2Q8NEN0 867 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 STK32AQ8WU08 396 aa6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 MKRN1Q9UHC7 482 aaKnown RBP6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 SALL2Q9Y467 1007 aaPredicted RBP6.81□□□□□ -1.32
CYCSP28-201ENST00000534284 NRG2O14511 850 aaPredicted RBP6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 F12P00748 615 aaPredicted RBP6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 RASA1P20936 1047 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 DIEXFQ68CQ4 756 aaKnown RBP6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 PLEKHM2Q8IWE5 1019 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 ZNF516Q92618 1163 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 MTRQ99707 1265 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 ZMIZ1Q9ULJ6 1067 aa6.8□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L15C9J2P7 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L10C9JJH3 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L13C9JLJ4 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L12C9JPN9 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L11C9JVI0 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L21D6R901 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L18D6R9N7 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L22D6RA61 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L17D6RBQ6 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L19D6RCP7 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L20D6RJB6 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 CCNYL3P0C7X3 344 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 APLP1P51693 650 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 USP17L24Q0WX57 530 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 NBPF14Q5TI25 921 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 FAM200AQ8TCP9 573 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 CEP126Q9P2H0 1117 aa6.79□□□□□ -1.32
CYCSP28-201ENST00000534284 MAP3K1Q13233 1512 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 MCCD1P59942 119 aaPredicted RBP6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 NCOA4Q13772 614 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 FAM174AQ8TBP5 190 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 NUDT12Q9BQG2 462 aa6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 GNEQ9Y223 722 aaKnown RBP6.78□□□□□ -1.32
CYCSP28-201ENST00000534284 CUX1P39880 1505 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 EML3Q32P44 896 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 CRTC2Q53ET0 693 aaPredicted RBP6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 PDXDC2PQ6P474 469 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 ZBTB33Q86T24 672 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 PLPP7Q8NBV4 271 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 GPKOWQ92917 476 aaPredicted RBP eCLIP6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 THAP11Q96EK4 314 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 GPSM3Q9Y4H4 160 aa6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 V9GY48 417 aaPredicted RBP6.77□□□□□ -1.33
CYCSP28-201ENST00000534284 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 KCNH2Q12809 1159 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 CCDC24Q8N4L8 307 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 SPSB2Q99619 263 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 ARHGAP9Q9BRR9 750 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 EVA1BQ9NVM1 165 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 AMOTL2Q9Y2J4 779 aa6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
CYCSP28-201ENST00000534284 CUX2O14529 1486 aa6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 LZTS3O60299 673 aaPredicted RBP6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 PTK7Q13308 1070 aa6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 ZNF787Q6DD87 383 aa6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 DZIP3Q86Y13 1208 aaKnown RBP6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 ZNF775Q96BV0 537 aaPredicted RBP6.75□□□□□ -1.33
CYCSP28-201ENST00000534284 CDCA7Q9BWT1 371 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms